Clone MIP13743 Report

Search the DGRC for MIP13743

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:137
Well:43
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14182-RA
Protein status:MIP13743.pep: gold
Sequenced Size:954

Clone Sequence Records

MIP13743.complete Sequence

954 bp assembled on 2009-09-28

GenBank Submission: BT099881.1

> MIP13743.complete
GAAAAGCAAACACAAATAAGGGAATAAAAATATATTAATTTCGGATCAGG
ATGGATAAACTAACGACAATTAGTGCCACGCTCTTCATGGCGGCCGATGT
CTTTGCGATTGTGAGTCTGGCCCTTCCCGACTGGATCATCACGGAGTCCG
GAACGGGTGACATCCGATTGGGACTGATGTGGACCTGCATGACGCTATAT
AACCGACCGCAAGTGTGCTATACACCCGAACTGCAGCCGGAGTGGCTGAT
TGCACTGATCTGCATCTTTGTGGGCTGCATCTGCGTGACCACCACCGTCA
TTCTGCTGGCGTCGTCATCCTGCAACCGGAATGTGATTCCGTACGCGCGC
TGGGTGGGATTCACGGCCATGGTGCTCTTCTGCATGGCGGCCGTCGTCTT
CCCGCTGGGATTCCACGTAGAGGAGATCGGCGGACAGGCCTACCAGCTGC
CCAACACATTCAAGATTGGCATCTCCTACATCATGTTCGTCCTGGCCCTG
TGGATCACCGTCGTGTCTGAGCTCTTTGCCGGCAAGGTCTGCCTGCCGCA
CTTCTAAAGACGTGACCACGGCATCGCTAGATTCCTCATTTCATTTGCAG
TTTGCTCTGTGATTTGTTACATCTTTTGTTTTACCCTAATTGTTTTGGGT
TTCAATTGGTAGGGTGCACTTTAAACACTCTATCTTAGTTAACATATTTA
AATTAGGTTAAATAAGCTGAAAACTCGAATATGAGCTACACGAATCTCTC
ATGCACTTGATACATTTTAAAAATTATTTACTTTTAAACCTGATTTTATT
TTAATTGATAAATTTAGTTGATAAATGTTTAGTAAGCCAGACTTGATCAT
ATCTAAGGAATAAGCGTAGCCCTAAGAACATTTAGTTAGTACAATTTTGT
TATACGAATACACATTTTGTATTTAAACTGAGAAAAAAAAAAAAAAAAAA
AAAA

MIP13743.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:50:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG14182-RA 1144 CG14182-RA 46..982 1..937 4685 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19968135..19968911 932..156 3855 99.7 Minus
chr3L 24539361 chr3L 19968977..19969134 158..1 775 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19978808..19979589 937..156 3910 100 Minus
3L 28110227 3L 19979655..19979812 158..1 790 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19971908..19972689 937..156 3910 100 Minus
3L 28103327 3L 19972755..19972912 158..1 790 100 Minus
Blast to na_te.dros performed on 2019-03-16 17:56:34 has no hits.

MIP13743.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:57:20 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19968979..19969134 1..156 99   Minus
chr3L 19968135..19968910 157..932 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:55:53 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..507 51..557 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:34:57 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..507 51..557 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:42:15 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..507 51..557 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:23:48 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..507 51..557 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 14:02:13 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..507 51..557 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:34:57 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..932 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:42:15 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..932 1..932 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:23:48 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
CG14182-RA 1..932 1..932 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:20 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19979657..19979812 1..156 100   Minus
3L 19978813..19979588 157..932 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:20 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19979657..19979812 1..156 100   Minus
3L 19978813..19979588 157..932 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:20 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19979657..19979812 1..156 100   Minus
3L 19978813..19979588 157..932 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:42:15 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19971913..19972688 157..932 100 <- Minus
arm_3L 19972757..19972912 1..156 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:41 Download gff for MIP13743.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19971913..19972688 157..932 100 <- Minus
3L 19972757..19972912 1..156 100   Minus

MIP13743.pep Sequence

Translation from 50 to 556

> MIP13743.pep
MDKLTTISATLFMAADVFAIVSLALPDWIITESGTGDIRLGLMWTCMTLY
NRPQVCYTPELQPEWLIALICIFVGCICVTTTVILLASSSCNRNVIPYAR
WVGFTAMVLFCMAAVVFPLGFHVEEIGGQAYQLPNTFKIGISYIMFVLAL
WITVVSELFAGKVCLPHF*

MIP13743.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10836-PA 168 GF10836-PA 1..168 1..168 864 97.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:53:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13356-PA 168 GG13356-PA 1..168 1..168 878 100 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14497-PA 167 GH14497-PA 1..167 1..168 819 92.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG14182-PB 168 CG14182-PB 1..168 1..168 890 100 Plus
CG14182-PD 168 CG14182-PD 1..168 1..168 890 100 Plus
CG14182-PA 168 CG14182-PA 1..168 1..168 890 100 Plus
CG14182-PC 126 CG14182-PC 1..126 43..168 684 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13655-PA 167 GI13655-PA 1..167 1..168 819 92.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22902-PA 168 GL22902-PA 1..168 1..168 862 96.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12810-PA 168 GA12810-PA 1..168 1..168 862 96.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15115-PA 168 GM15115-PA 1..168 1..168 878 100 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12237-PA 168 GD12237-PA 1..168 1..168 878 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13989-PA 167 GJ13989-PA 1..167 1..168 819 92.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17493-PA 167 GK17493-PA 1..167 1..168 842 95.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22450-PA 168 GE22450-PA 1..168 1..168 878 100 Plus
Dyak\GE22449-PA 168 GE22449-PA 1..168 1..168 878 100 Plus

MIP13743.hyp Sequence

Translation from 50 to 556

> MIP13743.hyp
MDKLTTISATLFMAADVFAIVSLALPDWIITESGTGDIRLGLMWTCMTLY
NRPQVCYTPELQPEWLIALICIFVGCICVTTTVILLASSSCNRNVIPYAR
WVGFTAMVLFCMAAVVFPLGFHVEEIGGQAYQLPNTFKIGISYIMFVLAL
WITVVSELFAGKVCLPHF*

MIP13743.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG14182-PB 168 CG14182-PB 1..168 1..168 890 100 Plus
CG14182-PD 168 CG14182-PD 1..168 1..168 890 100 Plus
CG14182-PA 168 CG14182-PA 1..168 1..168 890 100 Plus
CG14182-PC 126 CG14182-PC 1..126 43..168 684 100 Plus