Clone MIP13882 Report

Search the DGRC for MIP13882

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:138
Well:82
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG18747-RB
Protein status:MIP13882.pep: gold
Sequenced Size:1426

Clone Sequence Records

MIP13882.complete Sequence

1426 bp assembled on 2009-11-04

GenBank Submission: BT100246.1

> MIP13882.complete
ATCGGTTTTAGCTTTTTCGCGCTCGGACATTTAATCTTGGGAAAAATGGT
TGTTACGTGTGAGATCAGCTTCGATAATAATAAACATGGTACTTTCTACG
CCGGTCAGCTGGTAAAAGGATGCGCGACCCTTAAATGTGACAGGTCCAAG
GAGGTTCAAGCTGTGCTGCTCAAGGTAGTCGGATATTCTATAACCAAGTG
GAGCGAAAAGAGTCTGGGCTCGACAAAACTCTACGTGGGCCGGGAGGATT
ATCTATCATCAAATACTTATCTCGTGGGTTCCGAGCAAAACAACACTCAC
AACAACACTCACAGACTCACTATTGAGGCTGGGGTTCACAGCTACAACTT
CACCTGCCAGCTGCCCTATCAATGCCCCTCGTCCTTTGAGGGTCGCCATG
GATGCATCCGCTATATAGTGAAAGTCCTGCTGATCAGACCGTGGAAGTTC
GATCAGGCCTACACAAAGGGCTTCACGGTTCTCAAGATGCTGGATCTCAA
CTTTGACACTCCCCAGCTAAAGTCCGCTGCCCACAGCGAGGGTTACCGCA
CCTTTTGCTGTGGTCCATGCAAGACGGATCCTTTAAAACTGGAGCTGCAC
CTTCCACAAGCAGGCTACGTTCCTGGCCAGAAGATTCCCGTGACCATTGT
GGTAGTCAACAACACTGCCGTAGCCGTCTCCGAAATCCGACTCTCTCTGG
TAATGCTGGTGAGATACTACAGCGTCAGTCCTGAACACTCTCGAGTGGAG
CGATTAATAATATCGCGAGCTAAGGGGGAATCGGTGCTGAAGCAGTGCAC
CCGATCCCAGACCATCGATTTGCCCGTACCCTCAACGCCGCCCACCTGCG
TGGAGTTGAGCAACCTCATCCAGATCGCCTACCAACTGGAGGTTGAGGCG
TTGGTTAAGAGTCTACGCGAACAACAGCTGATGGTCATGCCGGTTACCGT
TGGCACCATTCCTCTGGCGGTTTCGGGCATTGTGGTTCAACAACCTCCCC
GGCGGAGCGCCCACTACGAAGGACCGGATTCCAGAAGGAATCCTCCCGAC
GAGCTACCCATGGTTACCGCACTTGAGAGCTTGCCCAGCGACCTGGCATC
CAGTGCTGCTGATTCAGCGCTCCCCAATTATGAGGAGTCCCGTCACACTC
AGCGGGGCAATATCAACGAAGAGGAACTACATGCCTTCGGGAGCAATGAG
TTTGCTCCACTTTATCCCGTGTATAGTATACCTAGTCCTACGCCCGTGCT
CACGGCAAACGCCCGGAATGCGGGATTCGTCAACCAAAGTTTTGTCAAAT
AGAGCATTTTAATTTTGAAAAACTTATCACTAAGATGTTTCAATTGGCAA
TACTTGATTGGATTCATTGTAGACCAAAAACCAAAAAAAATAAACTTATT
TAAATGTCAAAAAAAAAAAAAAAAAA

MIP13882.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG18747-RB 1714 CG18747-RB 239..1646 1..1408 7040 100 Plus
CG18747.a 1643 CG18747.a 239..1643 1..1405 7025 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:47:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 3607616..3608212 1117..521 2985 100 Minus
chr3R 27901430 chr3R 3606944..3607237 1408..1115 1470 100 Minus
chr3R 27901430 chr3R 3608456..3608688 522..290 1165 100 Minus
chr3R 27901430 chr3R 3609347..3609506 160..1 800 100 Minus
chr3R 27901430 chr3R 3608746..3608876 289..159 655 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:47:26
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7781556..7782152 1117..521 2985 100 Minus
3R 32079331 3R 7780884..7781177 1408..1115 1470 100 Minus
3R 32079331 3R 7782396..7782628 522..290 1165 100 Minus
3R 32079331 3R 7783287..7783446 160..1 800 100 Minus
3R 32079331 3R 7782686..7782816 289..159 655 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 7522387..7522983 1117..521 2985 100 Minus
3R 31820162 3R 7521715..7522008 1408..1115 1470 100 Minus
3R 31820162 3R 7523227..7523459 522..290 1165 100 Minus
3R 31820162 3R 7524118..7524277 160..1 800 100 Minus
3R 31820162 3R 7523517..7523647 289..159 655 100 Minus
3R 31820162 3R 7525286..7525319 899..866 140 94.1 Minus
Blast to na_te.dros performed on 2019-03-15 16:47:26 has no hits.

MIP13882.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:48:23 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 3609347..3609506 1..160 100   Minus
chr3R 3606944..3607234 1118..1408 100 <- Minus
chr3R 3607616..3608210 523..1117 100 <- Minus
chr3R 3608456..3608688 290..522 100 <- Minus
chr3R 3608746..3608874 161..289 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 10:04:11 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:13 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:21:53 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:17 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 10:04:11 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:13 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1257 46..1302 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:21:53 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1408 1..1408 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:17 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
CG18747-RB 1..1408 1..1408 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:23 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7780884..7781174 1118..1408 100 <- Minus
3R 7781556..7782150 523..1117 100 <- Minus
3R 7782396..7782628 290..522 100 <- Minus
3R 7782686..7782814 161..289 100 <- Minus
3R 7783287..7783446 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:23 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7780884..7781174 1118..1408 100 <- Minus
3R 7781556..7782150 523..1117 100 <- Minus
3R 7782396..7782628 290..522 100 <- Minus
3R 7782686..7782814 161..289 100 <- Minus
3R 7783287..7783446 1..160 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:48:23 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7780884..7781174 1118..1408 100 <- Minus
3R 7781556..7782150 523..1117 100 <- Minus
3R 7782396..7782628 290..522 100 <- Minus
3R 7782686..7782814 161..289 100 <- Minus
3R 7783287..7783446 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:21:53 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 3606606..3606896 1118..1408 100 <- Minus
arm_3R 3607278..3607872 523..1117 100 <- Minus
arm_3R 3608118..3608350 290..522 100 <- Minus
arm_3R 3608408..3608536 161..289 100 <- Minus
arm_3R 3609009..3609168 1..160 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:46 Download gff for MIP13882.complete
Subject Subject Range Query Range Percent Splice Strand
3R 7523227..7523459 290..522 100 <- Minus
3R 7523517..7523645 161..289 100 <- Minus
3R 7524118..7524277 1..160 100   Minus
3R 7521715..7522005 1118..1408 100 <- Minus
3R 7522387..7522981 523..1117 100 <- Minus

MIP13882.pep Sequence

Translation from 0 to 1301

> MIP13882.pep
IGFSFFALGHLILGKMVVTCEISFDNNKHGTFYAGQLVKGCATLKCDRSK
EVQAVLLKVVGYSITKWSEKSLGSTKLYVGREDYLSSNTYLVGSEQNNTH
NNTHRLTIEAGVHSYNFTCQLPYQCPSSFEGRHGCIRYIVKVLLIRPWKF
DQAYTKGFTVLKMLDLNFDTPQLKSAAHSEGYRTFCCGPCKTDPLKLELH
LPQAGYVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYSVSPEHSRVE
RLIISRAKGESVLKQCTRSQTIDLPVPSTPPTCVELSNLIQIAYQLEVEA
LVKSLREQQLMVMPVTVGTIPLAVSGIVVQQPPRRSAHYEGPDSRRNPPD
ELPMVTALESLPSDLASSAADSALPNYEESRHTQRGNINEEELHAFGSNE
FAPLYPVYSIPSPTPVLTANARNAGFVNQSFVK*

MIP13882.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:53:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17286-PA 440 GF17286-PA 1..440 16..433 1867 81.8 Plus
Dana\GF17285-PA 436 GF17285-PA 1..404 16..414 860 41.8 Plus
Dana\GF17283-PA 439 GF17283-PA 1..308 17..322 702 42 Plus
Dana\GF17284-PA 415 GF17284-PA 1..396 16..411 664 35.8 Plus
Dana\GF17683-PA 477 GF17683-PA 1..314 16..325 535 33.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:53:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24995-PA 416 GG24995-PA 24..416 36..433 1880 91.7 Plus
Dere\GG24984-PA 435 GG24984-PA 1..403 16..414 881 40.7 Plus
Dere\GG24962-PA 438 GG24962-PA 1..365 17..382 712 39.9 Plus
Dere\GG24973-PA 403 GG24973-PA 1..388 16..414 695 36.5 Plus
Dere\GG14185-PA 469 GG14185-PA 1..317 16..326 535 33.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:53:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19258-PA 404 GH19258-PA 1..404 16..433 1570 68.6 Plus
Dgri\GH19257-PA 430 GH19257-PA 1..423 16..432 891 43.2 Plus
Dgri\GH19256-PA 433 GH19256-PA 1..374 16..389 748 40.9 Plus
Dgri\GH18318-PA 461 GH18318-PA 1..316 16..328 551 34 Plus
Dgri\GH17389-PA 407 GH17389-PA 6..395 20..408 502 31.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG18747-PB 418 CG18747-PB 1..418 16..433 2177 100 Plus
CG18745-PA 433 CG18745-PA 1..401 16..414 879 41.9 Plus
CG18746-PA 438 CG18746-PA 1..434 17..433 707 36.6 Plus
CG18748-PC 409 CG18748-PC 1..394 16..414 704 36.6 Plus
CG18748-PB 359 CG18748-PB 1..344 16..414 575 31.8 Plus
CG10086-PA 469 CG10086-PA 1..392 16..414 541 31 Plus
CG1105-PA 422 CG1105-PA 6..416 20..414 490 31.4 Plus
CG2993-PA 511 CG2993-PA 1..305 16..322 383 30.4 Plus
CG2993-PB 524 CG2993-PB 1..305 16..322 383 30.4 Plus
CG2993-PC 545 CG2993-PC 1..305 16..322 383 30.4 Plus
CG2641-PA 429 CG2641-PA 1..385 16..415 373 27.1 Plus
Leash-PA 520 CG4674-PA 17..359 32..372 322 27.8 Plus
CG3014-PC 488 CG3014-PC 1..346 16..379 318 25.1 Plus
CG3014-PA 488 CG3014-PA 1..346 16..379 318 25.1 Plus
CG14696-PA 457 CG14696-PA 9..364 24..408 298 25.9 Plus
CG18744-PB 410 CG18744-PB 5..399 20..410 267 25.8 Plus
Vdup1-PE 342 CG7047-PE 10..330 22..354 210 23.6 Plus
Vdup1-PD 342 CG7047-PD 10..330 22..354 210 23.6 Plus
Vdup1-PA 342 CG7047-PA 10..330 22..354 210 23.6 Plus
Vdup1-PC 342 CG7047-PC 10..330 22..354 210 23.6 Plus
Vdup1-PB 342 CG7047-PB 10..330 22..354 210 23.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:53:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23468-PA 405 GI23468-PA 1..403 16..433 1562 69 Plus
Dmoj\GI23467-PA 430 GI23467-PA 1..409 16..414 869 42.7 Plus
Dmoj\GI23466-PA 427 GI23466-PA 1..391 16..403 754 38.5 Plus
Dmoj\GI24129-PA 464 GI24129-PA 1..414 16..410 576 32.4 Plus
Dmoj\GI23546-PA 409 GI23546-PA 6..397 20..408 506 31.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12155-PA 435 GL12155-PA 1..403 16..414 882 43.5 Plus
Dper\GL12156-PA 193 GL12156-PA 1..193 235..433 790 77.4 Plus
Dper\GL12153-PA 403 GL12153-PA 1..400 17..410 715 37.6 Plus
Dper\GL12157-PA 148 GL12157-PA 1..146 16..166 683 84.1 Plus
Dper\GL12154-PA 435 GL12154-PA 1..421 16..429 614 33.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15065-PA 407 GA15065-PA 1..407 16..433 1748 81.8 Plus
Dpse\GA15063-PA 435 GA15063-PA 1..422 16..433 888 42.1 Plus
Dpse\GA15064-PA 431 GA15064-PA 1..425 17..431 725 36.1 Plus
Dpse\GA26206-PC 435 GA26206-PC 1..421 16..429 616 33.7 Plus
Dpse\GA10062-PA 466 GA10062-PA 1..322 16..333 525 32.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10460-PA 417 GM10460-PA 26..417 37..433 1997 94.2 Plus
Dsec\GM10459-PA 435 GM10459-PA 1..403 16..414 889 43.1 Plus
Dsec\GM10457-PA 438 GM10457-PA 1..315 17..334 702 42.3 Plus
Dsec\GM10458-PA 406 GM10458-PA 1..387 16..410 681 36.3 Plus
Dsec\GM10973-PA 469 GM10973-PA 1..317 16..326 541 33.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19464-PA 417 GD19464-PA 26..417 37..433 2011 95 Plus
Dsim\GD19463-PA 435 GD19463-PA 1..403 16..414 887 42.9 Plus
Dsim\GD19461-PA 438 GD19461-PA 1..434 17..433 701 35.6 Plus
Dsim\GD19947-PA 469 GD19947-PA 1..317 16..326 542 33.8 Plus
Dsim\GD19462-PA 320 GD19462-PA 1..301 106..410 520 35 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:53:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10223-PA 406 GJ10223-PA 1..406 16..433 1594 69.7 Plus
Dvir\GJ10222-PA 426 GJ10222-PA 1..414 16..428 808 41.4 Plus
Dvir\GJ10221-PA 431 GJ10221-PA 1..373 16..389 793 42.3 Plus
Dvir\GJ10952-PA 464 GJ10952-PA 1..314 16..326 588 36.3 Plus
Dvir\GJ24027-PA 410 GJ24027-PA 6..404 20..414 506 31.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:53:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11061-PA 412 GK11061-PA 1..411 16..431 1712 74.4 Plus
Dwil\GK11060-PA 431 GK11060-PA 1..418 16..428 884 42.1 Plus
Dwil\GK11059-PA 430 GK11059-PA 1..415 16..429 814 42.6 Plus
Dwil\GK12019-PA 469 GK12019-PA 1..429 16..415 536 30 Plus
Dwil\GK10823-PA 425 GK10823-PA 6..413 20..408 469 30.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:53:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25774-PA 413 GE25774-PA 1..413 16..433 2024 92.8 Plus
Dyak\GE25773-PA 435 GE25773-PA 1..403 16..414 902 43.5 Plus
Dyak\GE25771-PA 438 GE25771-PA 1..315 17..334 686 41.7 Plus
Dyak\GE11153-PA 388 GE11153-PA 1..373 37..414 628 36.1 Plus
Dyak\GE25772-PA 388 GE25772-PA 1..373 37..414 628 36.1 Plus

MIP13882.hyp Sequence

Translation from 0 to 1301

> MIP13882.hyp
IGFSFFALGHLILGKMVVTCEISFDNNKHGTFYAGQLVKGCATLKCDRSK
EVQAVLLKVVGYSITKWSEKSLGSTKLYVGREDYLSSNTYLVGSEQNNTH
NNTHRLTIEAGVHSYNFTCQLPYQCPSSFEGRHGCIRYIVKVLLIRPWKF
DQAYTKGFTVLKMLDLNFDTPQLKSAAHSEGYRTFCCGPCKTDPLKLELH
LPQAGYVPGQKIPVTIVVVNNTAVAVSEIRLSLVMLVRYYSVSPEHSRVE
RLIISRAKGESVLKQCTRSQTIDLPVPSTPPTCVELSNLIQIAYQLEVEA
LVKSLREQQLMVMPVTVGTIPLAVSGIVVQQPPRRSAHYEGPDSRRNPPD
ELPMVTALESLPSDLASSAADSALPNYEESRHTQRGNINEEELHAFGSNE
FAPLYPVYSIPSPTPVLTANARNAGFVNQSFVK*

MIP13882.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:36:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG18747-PB 418 CG18747-PB 1..418 16..433 2177 100 Plus
CG18745-PA 433 CG18745-PA 1..401 16..414 879 41.9 Plus
CG18746-PA 438 CG18746-PA 1..434 17..433 707 36.6 Plus
CG18748-PC 409 CG18748-PC 1..394 16..414 704 36.6 Plus
CG18748-PB 359 CG18748-PB 1..344 16..414 575 31.8 Plus