Clone MIP13910 Report

Search the DGRC for MIP13910

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:139
Well:10
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG10166-RA
Protein status:MIP13910.pep: gold
Sequenced Size:807

Clone Sequence Records

MIP13910.complete Sequence

807 bp assembled on 2009-09-29

GenBank Submission: BT099902.1

> MIP13910.complete
CACGGTTCTTGAGAACAATTACAATGCCAACAAATGGCCATAAATACAGC
ATTTTGATGCCCACTTACAATGAAAAGGATAATTTGCCCATTATAATATG
GCTAATTGTGAAATACATGAAGGCGAGCGGCTTGGAATACGAGGTGATTG
TGATTGATGATGGTAGTCCGGATGGAACACTAGACGTGGCCAAAGACCTG
CAGAAGATCTACGGGGAGGACAAGATTGTGCTGAGACCACGTGGCTCCAA
ATTGGGACTCGGAACGGCCTACATACATGGCATCAAACATGCCACCGGCG
ACTTTATAGTTATCATCGATGCGGACTTGAGTCATCATCCCAAATTCATT
CCCGAGTTCATTAAGCTGCAACAGGAGGGCAACTATGACATTGTATCCGG
CACTCGGTATGCCGGAAATGGAGGTGTCTTTGGCTGGGACTTCAAGCGCA
AGCTCATCTCGCGCGGCGCCAACTTTTTGTCCCAGGTGCTTTTACGTCCG
AACGCCAGTGATTTGACCGGCTCCTTCAGGCTCTACAAGAAGGATGTACT
GGAGAAATGCATTGCCAGCTGCGTGTCCAAAGGCTACGTGTTCCAAATGG
AGATGCTCGTTCGGGCTAGACAGCACGGCTACACCATCGCCGAGGTGCCC
ATCACCTTCGTGGACCGTATTTATGGCACCTCCAAGCTCGGCGGGACCGA
GATTATTCAGTTTGCCAAGAACCTTTTGTATCTGTTTGCGACCACATAAA
GAGAAAACCACCATTAGCTGGGTAGATTTTTAAATTTTTAAAAAAAAAAA
AAAAAAA

MIP13910.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG10166-RA 1052 CG10166-RA 179..969 1..791 3955 100 Plus
CG10132-RA 4769 CG10132-RA 4701..4769 791..723 345 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19523984..19524438 789..335 2260 99.8 Minus
chr2L 23010047 chr2L 19524503..19524715 338..126 1065 100 Minus
chr2L 23010047 chr2L 19524771..19524897 127..1 635 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19525432..19525888 791..335 2270 99.8 Minus
2L 23513712 2L 19525953..19526165 338..126 1065 100 Minus
2L 23513712 2L 19526221..19526347 127..1 635 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19525432..19525888 791..335 2270 99.7 Minus
2L 23513712 2L 19525953..19526165 338..126 1065 100 Minus
2L 23513712 2L 19526221..19526347 127..1 635 100 Minus
Blast to na_te.dros performed on 2019-03-16 07:10:42 has no hits.

MIP13910.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:11:31 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19523984..19524434 339..789 100 <- Minus
chr2L 19524503..19524713 128..338 100 <- Minus
chr2L 19524771..19524897 1..127 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:56:09 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..726 24..749 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:35:20 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..726 24..749 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:35:25 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..726 24..749 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:38 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..726 24..749 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-29 13:12:30 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..726 24..749 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:35:20 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 1..789 1..789 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:25 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 22..810 1..789 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:38 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
CG10166-RA 22..810 1..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:31 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19525434..19525884 339..789 100 <- Minus
2L 19525953..19526163 128..338 100 <- Minus
2L 19526221..19526347 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:31 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19525434..19525884 339..789 100 <- Minus
2L 19525953..19526163 128..338 100 <- Minus
2L 19526221..19526347 1..127 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:31 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19525434..19525884 339..789 100 <- Minus
2L 19525953..19526163 128..338 100 <- Minus
2L 19526221..19526347 1..127 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:25 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19525953..19526163 128..338 100 <- Minus
arm_2L 19526221..19526347 1..127 100   Minus
arm_2L 19525434..19525884 339..789 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:57 Download gff for MIP13910.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19525434..19525884 339..789 100 <- Minus
2L 19525953..19526163 128..338 100 <- Minus
2L 19526221..19526347 1..127 100   Minus

MIP13910.hyp Sequence

Translation from 2 to 748

> MIP13910.hyp
RFLRTITMPTNGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIV
IDDGSPDGTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGD
FIVIIDADLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRK
LISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASCVSKGYVFQME
MLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT*

MIP13910.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:43:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG10166-PA 241 CG10166-PA 1..241 8..248 1256 100 Plus
wol-PA 326 CG7870-PA 52..285 3..221 170 25.7 Plus

MIP13910.pep Sequence

Translation from 2 to 748

> MIP13910.pep
RFLRTITMPTNGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIV
IDDGSPDGTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGD
FIVIIDADLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRK
LISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASCVSKGYVFQME
MLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT*

MIP13910.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15626-PA 241 GF15626-PA 1..241 8..248 1193 91.7 Plus
Dana\GF15267-PA 326 GF15267-PA 52..285 3..221 171 26.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:55:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21624-PA 241 GG21624-PA 1..241 8..248 1263 97.9 Plus
Dere\GG23458-PA 326 GG23458-PA 52..308 3..245 178 24 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:55:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13502-PA 241 GH13502-PA 1..241 8..248 1193 90 Plus
Dgri\GH10504-PA 241 GH10504-PA 1..241 8..248 1193 90 Plus
Dgri\GH10179-PA 326 GH10179-PA 52..285 3..221 176 24.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG10166-PA 241 CG10166-PA 1..241 8..248 1256 100 Plus
wol-PA 326 CG7870-PA 52..285 3..221 170 25.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:55:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10202-PA 241 GI10202-PA 1..241 8..248 1197 92.5 Plus
Dmoj\GI14242-PA 326 GI14242-PA 52..285 3..221 176 25.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25681-PA 241 GL25681-PA 1..241 8..248 1223 94.2 Plus
Dper\GL19385-PA 344 GL19385-PA 69..285 16..221 173 24.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:55:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10126-PA 241 GA10126-PA 1..241 8..248 1226 94.2 Plus
Dpse\GA20647-PA 326 GA20647-PA 69..285 16..221 175 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17002-PA 241 GM17002-PA 1..241 8..248 1270 99.2 Plus
Dsec\GM13089-PA 326 GM13089-PA 52..308 3..245 174 25.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:55:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21748-PA 241 GD21748-PA 1..241 8..248 1270 99.2 Plus
Dsim\GD22423-PA 326 GD22423-PA 52..308 3..245 174 25.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18012-PA 241 GJ18012-PA 1..241 8..248 1205 92.5 Plus
Dvir\GJ20570-PA 326 GJ20570-PA 52..285 3..221 181 25.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:55:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14776-PA 241 GK14776-PA 1..241 8..248 1223 94.2 Plus
Dwil\GK23854-PA 326 GK23854-PA 69..285 16..221 171 25.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:55:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12644-PA 241 GE12644-PA 1..241 8..248 1268 98.3 Plus
Dyak\GE11069-PA 326 GE11069-PA 52..308 3..245 165 24 Plus