Clone MIP13921 Report

Search the DGRC for MIP13921

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:139
Well:21
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG12715-RA
Protein status:MIP13921.pep: gold
Sequenced Size:1976

Clone Sequence Records

MIP13921.complete Sequence

1976 bp assembled on 2009-09-28

GenBank Submission: BT099871.1

> MIP13921.complete
TAACTCGTTTCAGTGGCTCATTCTGAGCGATTCGCGATGGTCTACTATCA
ATTGCGGGCCTCCAGGACGCCACTTCTCTGCTGTTTGGGTCTTTTTGTTG
TCTATCTGCTCTACCAGTCACTTGGATCACTCCAAGTGTTGAATAACCCA
CAGGGAACTATATCACAGCCAGCATCCCGGCCCAAAAAGGTTGCTGTCGT
TCACCATGGAGCCCATCCAGGAATCGATACCGAAGGCAAGGAGAGCGCGG
GATCGCAGCAGGAACCGAATCTGGAGGAACTGTTGCGGAGCAAAGAGGAC
GTGGACTGGGTGCGTCTGCGGGCTGACCAGTGTGCCCCGTATCCCCGCTA
CGAAGACATCGAGTTTCCGAATCCCTACTTCCAGCTAACAAGGCATGAAA
ATCTATCTTACTATCTCTATGGGGCATACTACGACCGGAGGCCCAGGATA
CCGGAGATGGTGGTCCTCGGAATGGCCACCTACAATGGTTCCTATCCGGC
CACCTATTTGCAGGTTTGGTACGATGGCGATAACCAGCCAGAAAAGTTGC
CCGTATACCAAAGCAAATTGGGCTGGTACAAGGAGTGGGGCCTTCCAGAG
GGTGTTGTATTTCCTACGCTCCTAACGTTTCAAATGAAATCCCAAAGGGT
TCCACAGCTGGTGAGTCTGGTCTTCGATCCGTGTGCGGTGCCAACGAATG
CCTTTAAGGTGGTACCACCGCCACCCGAGGAGCCACCAAATGCACAACGT
CCAAAGCGAATCGGAGTTTGTGTGAAATATCTCCGATTTCCCGACGTCGA
CATGACCGATAGATTTGTGGAATGGCTGGAACTGATGAGGCTACTGGGTG
CCACCAAGGTGACCGCCTTCGATATTGGACTCCTTATGCCCAACACAAGG
AGAACCCTTGCCCACTACACGGGAGCTGGTGATGGATTCTTGGATCTGCG
GAAATTCCGTTTTCCCAATGAGACCGCAGATCACGAGACATTCCGTGCGA
TGATTATTGAGGTGCTGCTGTACAATGACTGTTTATACCGGAATCTGTAC
GATTTCGATTTTGTGGCCGTGGTGGATGTGGATGAGGTAATAATGCCACT
GGGTGAGCATCGCACTTGGCAAGATTTGCTGACGCATTTGCAGGTTCAGG
ATGTGAATAGCACCACTCGCTCTAGCTATTGCTTCCGCAATGTGTATTTT
TCCAAGCAGCTACCCGTGGACGAAAGCATTCCGGAACAATTCTTTATGCT
GCGTCATGTGATCCGGGTGGCGGAACACTTGGATCCATACTCTGCGATCA
AGTGCCTTCATGATACCAGCTATGTTACGTTGCTGCATAATCATTTTCCC
TTTCAATGGATGAACGCGAGTGATCCGTACCATGTTGGCATCGATCTTGG
CCAGATGCAGCACTATCGCTATACGGAAAATCTCAAATCTTTGGTTGAAC
CGCCGCCCGTAAGGGATGATAACATTCGACGATTCCAGCACCAACTCATC
CACAACTCACTGGAAGTCCATCGGCAGCTGGCCCAGAGTCGAGCGGCATA
TTGATTATATTTTAATTGCTTTTTCGTTATATTTAAGAGGCTTAAATTGG
CGGCTGCGCCGGCCAAGGGCTTTGTACAGTACGTGTCCCACCTTTTGACC
CCGGGCCACGTCGGCAGGATAATAATTGCTTATTGACATGACGGAGTCCG
GAGTGGTCAGGGCGCCCAGGTGTGCCGCCAGTGTGTGCCGCAAAAGTTTG
CTTTTTCCATTTAGCTTAGCCACATCAAGGGCTGTACTTTCAGCGCCGGT
GAAATATAGATACTGCTCACAGTCCGCAGTATAATTGATAAGCCATAGAT
ATAGATATGTTGCTCTAACCGCCTATTTTTTTTTTTTTATTAGCATAAAA
TAAGTACAAAAGTGAATTCTTCCATTGATTCGATTTTTAAACATTGTTAT
TCTTTTTCGAAAAAAAAAAAAAAAAA

MIP13921.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG12715-RA 2166 CG12715-RA 60..2020 1..1961 9805 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 12943918..12945687 1959..190 8790 99.8 Minus
chrX 22417052 chrX 12946063..12946252 190..1 905 98.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:54:12
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13052993..13054764 1961..190 8860 100 Minus
X 23542271 X 13055139..13055328 190..1 950 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13061091..13062862 1961..190 8860 100 Minus
X 23527363 X 13063237..13063426 190..1 950 100 Minus
Blast to na_te.dros performed on 2019-03-16 13:54:13 has no hits.

MIP13921.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:55:06 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 12943918..12945686 191..1959 99 <- Minus
chrX 12946063..12946252 1..190 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:55:46 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1518 37..1554 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:34:39 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1518 37..1554 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:31:30 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1518 37..1554 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:26:05 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1518 37..1554 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 11:23:17 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1518 37..1554 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:34:37 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1838 37..1874 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:31:30 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1959 1..1959 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:26:05 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
CG12715-RA 1..1959 1..1959 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:55:06 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
X 13055139..13055328 1..190 100   Minus
X 13052995..13054763 191..1959 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:55:06 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
X 13055139..13055328 1..190 100   Minus
X 13052995..13054763 191..1959 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:55:06 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
X 13055139..13055328 1..190 100   Minus
X 13052995..13054763 191..1959 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:31:30 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12947028..12948796 191..1959 100 <- Minus
arm_X 12949172..12949361 1..190 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:31 Download gff for MIP13921.complete
Subject Subject Range Query Range Percent Splice Strand
X 13061093..13062861 191..1959 100 <- Minus
X 13063237..13063426 1..190 100   Minus

MIP13921.hyp Sequence

Translation from 36 to 1553

> MIP13921.hyp
MVYYQLRASRTPLLCCLGLFVVYLLYQSLGSLQVLNNPQGTISQPASRPK
KVAVVHHGAHPGIDTEGKESAGSQQEPNLEELLRSKEDVDWVRLRADQCA
PYPRYEDIEFPNPYFQLTRHENLSYYLYGAYYDRRPRIPEMVVLGMATYN
GSYPATYLQVWYDGDNQPEKLPVYQSKLGWYKEWGLPEGVVFPTLLTFQM
KSQRVPQLVSLVFDPCAVPTNAFKVVPPPPEEPPNAQRPKRIGVCVKYLR
FPDVDMTDRFVEWLELMRLLGATKVTAFDIGLLMPNTRRTLAHYTGAGDG
FLDLRKFRFPNETADHETFRAMIIEVLLYNDCLYRNLYDFDFVAVVDVDE
VIMPLGEHRTWQDLLTHLQVQDVNSTTRSSYCFRNVYFSKQLPVDESIPE
QFFMLRHVIRVAEHLDPYSAIKCLHDTSYVTLLHNHFPFQWMNASDPYHV
GIDLGQMQHYRYTENLKSLVEPPPVRDDNIRRFQHQLIHNSLEVHRQLAQ
SRAAY*

MIP13921.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:02:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG12715-PB 505 CG12715-PB 1..505 1..505 2725 100 Plus
CG12715-PA 505 CG12715-PA 1..505 1..505 2725 100 Plus
CG3655-PD 563 CG3655-PD 104..529 90..493 540 32.3 Plus
CG3655-PB 563 CG3655-PB 104..529 90..493 540 32.3 Plus
CG3655-PA 563 CG3655-PA 104..529 90..493 540 32.3 Plus

MIP13921.pep Sequence

Translation from 36 to 1553

> MIP13921.pep
MVYYQLRASRTPLLCCLGLFVVYLLYQSLGSLQVLNNPQGTISQPASRPK
KVAVVHHGAHPGIDTEGKESAGSQQEPNLEELLRSKEDVDWVRLRADQCA
PYPRYEDIEFPNPYFQLTRHENLSYYLYGAYYDRRPRIPEMVVLGMATYN
GSYPATYLQVWYDGDNQPEKLPVYQSKLGWYKEWGLPEGVVFPTLLTFQM
KSQRVPQLVSLVFDPCAVPTNAFKVVPPPPEEPPNAQRPKRIGVCVKYLR
FPDVDMTDRFVEWLELMRLLGATKVTAFDIGLLMPNTRRTLAHYTGAGDG
FLDLRKFRFPNETADHETFRAMIIEVLLYNDCLYRNLYDFDFVAVVDVDE
VIMPLGEHRTWQDLLTHLQVQDVNSTTRSSYCFRNVYFSKQLPVDESIPE
QFFMLRHVIRVAEHLDPYSAIKCLHDTSYVTLLHNHFPFQWMNASDPYHV
GIDLGQMQHYRYTENLKSLVEPPPVRDDNIRRFQHQLIHNSLEVHRQLAQ
SRAAY*

MIP13921.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:52:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20876-PA 450 GF20876-PA 1..449 1..461 1116 48.9 Plus
Dana\GF22030-PA 565 GF22030-PA 88..515 94..487 596 35.3 Plus
Dana\GF22034-PA 568 GF22034-PA 101..530 87..494 540 32 Plus
Dana\GF22029-PA 596 GF22029-PA 110..522 99..461 538 32 Plus
Dana\GF21673-PA 806 GF21673-PA 251..695 115..489 175 23.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12720-PA 566 GG12720-PA 101..530 87..494 546 32 Plus
Dere\GG12717-PA 587 GG12717-PA 58..504 75..461 516 30.4 Plus
Dere\GG10210-PA 817 GG10210-PA 255..702 115..489 169 23.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10903-PA 491 GH10903-PA 6..449 79..487 685 39 Plus
Dgri\GH10907-PA 491 GH10907-PA 6..449 79..487 670 39.2 Plus
Dgri\GH10906-PA 492 GH10906-PA 6..450 79..487 662 37.1 Plus
Dgri\GH11996-PA 558 GH11996-PA 73..513 79..484 653 36.9 Plus
Dgri\GH12730-PA 572 GH12730-PA 109..543 87..499 543 31.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG12715-PB 505 CG12715-PB 1..505 1..505 2725 100 Plus
CG12715-PA 505 CG12715-PA 1..505 1..505 2725 100 Plus
CG3655-PD 563 CG3655-PD 104..529 90..493 540 32.3 Plus
CG3655-PB 563 CG3655-PB 104..529 90..493 540 32.3 Plus
CG3655-PA 563 CG3655-PA 104..529 90..493 540 32.3 Plus
CG3655-PC 596 CG3655-PC 104..529 90..493 540 32.3 Plus
CG11384-PA 588 CG11384-PA 63..517 75..469 530 30.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16264-PA 553 GI16264-PA 127..551 97..501 1031 50.5 Plus
Dmoj\GI15623-PA 565 GI15623-PA 85..520 98..484 681 37.4 Plus
Dmoj\GI14986-PA 571 GI14986-PA 109..543 87..499 533 31.4 Plus
Dmoj\GI14981-PA 593 GI14981-PA 59..535 75..487 532 31.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22952-PA 483 GL22952-PA 1..481 1..499 1066 45.9 Plus
Dper\GL14402-PA 561 GL14402-PA 101..530 87..494 544 32 Plus
Dper\GL14398-PA 455 GL14398-PA 116..423 214..499 473 37.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11770-PA 512 GA11770-PA 1..510 1..499 1146 47.9 Plus
Dpse\GA23004-PA 584 GA23004-PA 100..552 99..499 641 35.4 Plus
Dpse\GA10965-PA 581 GA10965-PA 97..509 99..471 589 34.4 Plus
Dpse\GA17592-PA 561 GA17592-PA 101..530 87..494 544 32 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18994-PA 564 GM18994-PA 75..534 79..499 611 35.8 Plus
Dsec\GM18999-PA 566 GM18999-PA 101..530 87..494 541 32 Plus
Dsec\GM18993-PA 591 GM18993-PA 101..533 99..487 526 31 Plus
Dsec\GM11519-PA 107 GM11519-PA 1..82 256..337 415 92.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24525-PA 506 GD24525-PA 1..506 1..505 2408 90.5 Plus
Dsim\GD16434-PA 564 GD16434-PA 75..534 79..499 602 35.4 Plus
Dsim\GD16438-PA 301 GD16438-PA 101..301 87..284 284 32.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16905-PA 529 GJ16905-PA 87..527 79..501 1023 48.7 Plus
Dvir\GJ16335-PA 565 GJ16335-PA 86..535 98..499 686 38.2 Plus
Dvir\GJ16330-PA 591 GJ16330-PA 104..510 97..461 512 32.7 Plus
Dvir\GJ15223-PA 186 GJ15223-PA 1..156 353..499 275 44.7 Plus
Dvir\GJ15224-PA 456 GJ15224-PA 87..234 99..234 202 34.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16244-PA 560 GK16244-PA 102..536 87..499 543 31.4 Plus
Dwil\GK16240-PA 579 GK16240-PA 105..536 99..490 537 32.3 Plus
Dwil\GK16241-PA 419 GK16241-PA 6..377 147..487 489 35.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16183-PA 501 GE16183-PA 1..501 1..505 1861 71.6 Plus
Dyak\GE16543-PA 564 GE16543-PA 75..534 79..499 612 36.3 Plus
Dyak\GE16546-PA 566 GE16546-PA 101..530 87..494 543 32 Plus
Dyak\GE16542-PA 586 GE16542-PA 9..509 10..461 540 30.3 Plus