Clone Sequence Records
MIP13960.complete Sequence
1372 bp assembled on 2011-09-01
GenBank Submission: BT128866.1
> MIP13960.complete
AACCGATCGGTGACCACGATGCGGATGAGATTGCTGGTCATTTGGATTTC
CCTAACTGCTCTCCTTGAATGGAGCAGGGCGCAGGAGGACAACATTGAAG
AGTTCAGCTTAAGCGGCGGACTAGCGGGTGAAAAGTCAGAAAACTCAGGC
ATTGAAGCCGGTGAAAATGACACAGAATCCCTAGGACAAAGTCACTTATT
TTTGAACACAACACAAAGTCCAACTGATGACCCTGAGCCTACACAGGAAC
TGTCATCTATTGAAAGTCAAGTTGGACAGGTAGGCCACCAGTCTGGAGAG
GATGAGAAGGAACCGGAAATCACAAGCTTAGACACTAATTCGGAAACGGA
TAACAAATTAGAAGGGGACAAAGAAGAGCCAGAAAAGGAATCCACCGGGA
ATTCCGGTGGCTTTGCGCCAACTCAAGTTCCTCAAACCGACAAAGTAGAC
CAATCGTCCGGACATATGGATACTTCGGACTCGTCTTCAGACTCTTCAGT
GACTCCCGATACTCGCCCATCAACTTCACTAGAGGAGGTCCTGGAAACTC
ACCCAACAAACAAAACTGAGGAACCAATGGGAGGATCGCCCGATTACCCG
GCTGATGGGCCCCAGGAGGACACCACAACTCCACCCCCAGAAGAAACAAC
CTTGGCACCACACAAGCCCCCAGTTGCAGATCCAGAACAGAAACCCCTAA
GCTGCTATTCCTGCATGTTCTGCAACAAAACGATCACCAATGAAACAAAG
TCAAACTGCGGCCCGATACCTGGCAAAAGGAATGGATGTCGCACCATACT
GCTCAACGATCCCAATGTCGTTCCGGGGAAGAAGTACTTCCTGCATCGGG
GCTGTGTATCCGAGTTAGATATGGAGCTATCTCGCTATTGCGCCGAGAAT
GAGAAGCTGTGTCCCACGTGCTACGAGGACAATTGTAATGTTCACAACAT
GACTGAATATGAAGTCACTCCGGGCTCTGCAGCAGTCACCCATCATCCGG
GGGTGCTATTCCTTATCTGGAGCATCGGTTTGGTTAGCTGGCAGGTGGCT
TTTTAAAAATCCACCCACGCTATTCTGAGTCATAACAATTAAAAAGTAAA
TGGAGATTGGCATACTTAAAAATCGATAGGTATGACTAATACTGAAAATC
GCAGATTATATCGCTGTCTGTCTAGATAAATTAGTTTATCTATGAAATAC
ATAAGCCCAATTAATATAAATTTCTGTTACGAAACTTAATCTATTTGCAG
CGCGTGGGGATTTTCGTTTTCTTTCTTAAATAGTGAAATATACTGTACTT
AATATGCAAATGTATATAAAATAAAGCATTTCAAGGCGAAACATTTGATT
GAGAAAAAAAAAAAAAAAAAAA
MIP13960.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:59:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18989749..18991101 | 1..1353 | 6645 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:59:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18991057..18992411 | 1..1355 | 6775 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18991057..18992411 | 1..1355 | 6775 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 10:59:28 has no hits.
MIP13960.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:00:49 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18989749..18991101 | 1..1353 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-01 12:13:58 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 1..1038 | 19..1056 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:32:01 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 1..1038 | 19..1056 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:18:17 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 1..1038 | 19..1056 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-01 12:13:58 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 1..1353 | 1..1353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:32:01 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 38..1390 | 1..1353 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:17 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15169-RA | 38..1390 | 1..1353 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:49 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18991057..18992409 | 1..1353 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:49 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18991057..18992409 | 1..1353 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:00:49 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18991057..18992409 | 1..1353 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:32:01 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18991057..18992409 | 1..1353 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:41 Download gff for
MIP13960.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18991057..18992409 | 1..1353 | 100 | | Plus |
MIP13960.hyp Sequence
Translation from 0 to 1055
> MIP13960.hyp
NRSVTTMRMRLLVIWISLTALLEWSRAQEDNIEEFSLSGGLAGEKSENSG
IEAGENDTESLGQSHLFLNTTQSPTDDPEPTQELSSIESQVGQVGHQSGE
DEKEPEITSLDTNSETDNKLEGDKEEPEKESTGNSGGFAPTQVPQTDKVD
QSSGHMDTSDSSSDSSVTPDTRPSTSLEEVLETHPTNKTEEPMGGSPDYP
ADGPQEDTTTPPPEETTLAPHKPPVADPEQKPLSCYSCMFCNKTITNETK
SNCGPIPGKRNGCRTILLNDPNVVPGKKYFLHRGCVSELDMELSRYCAEN
EKLCPTCYEDNCNVHNMTEYEVTPGSAAVTHHPGVLFLIWSIGLVSWQVA
F*
MIP13960.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:16:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15169-PA | 345 | CG15169-PA | 1..345 | 7..351 | 1855 | 100 | Plus |
MIP13960.pep Sequence
Translation from 0 to 1055
> MIP13960.pep
NRSVTTMRMRLLVIWISLTALLEWSRAQEDNIEEFSLSGGLAGEKSENSG
IEAGENDTESLGQSHLFLNTTQSPTDDPEPTQELSSIESQVGQVGHQSGE
DEKEPEITSLDTNSETDNKLEGDKEEPEKESTGNSGGFAPTQVPQTDKVD
QSSGHMDTSDSSSDSSVTPDTRPSTSLEEVLETHPTNKTEEPMGGSPDYP
ADGPQEDTTTPPPEETTLAPHKPPVADPEQKPLSCYSCMFCNKTITNETK
SNCGPIPGKRNGCRTILLNDPNVVPGKKYFLHRGCVSELDMELSRYCAEN
EKLCPTCYEDNCNVHNMTEYEVTPGSAAVTHHPGVLFLIWSIGLVSWQVA
F*
MIP13960.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:32:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF15261-PA | 341 | GF15261-PA | 1..332 | 7..347 | 352 | 33.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:32:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21144-PA | 347 | GG21144-PA | 1..347 | 7..351 | 1219 | 73.2 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15169-PA | 345 | CG15169-PA | 1..345 | 7..351 | 1855 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:32:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL18502-PA | 369 | GL18502-PA | 1..369 | 7..351 | 248 | 28.9 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:32:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA13545-PA | 338 | GA13545-PA | 1..338 | 7..351 | 245 | 30.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:32:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17306-PA | 483 | GM17306-PA | 1..326 | 7..344 | 1489 | 85.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24168-PA | 343 | GD24168-PA | 1..343 | 7..351 | 1518 | 91.3 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK23890-PA | 282 | GK23890-PA | 1..282 | 7..349 | 164 | 27.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:32:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13217-PA | 361 | GE13217-PA | 1..355 | 7..351 | 1264 | 72.3 | Plus |