Clone MIP13993 Report

Search the DGRC for MIP13993

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:139
Well:93
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG32214-RB
Protein status:MIP13993.pep: gold
Sequenced Size:436

Clone Sequence Records

MIP13993.complete Sequence

436 bp assembled on 2009-09-28

GenBank Submission: BT099896.1

> MIP13993.complete
TTTCACCATGTTCAAATACGCTGTCGTCGTTCTCGCTCTCGTTGCCTGCG
CTGCTGCCAAGCCTGGACTCCTGGGTGCTCCCCTTGCTTACACTGCTCCT
CTGGCTTACTCTGCTCCTGCTGCCGTGGTAGCTGCTCCCGCTCCAGTTGT
GACCGCAACCAGTAGCCAGGTCATCGCCAGGAATTACAATGGAATCGCCG
CTGCTCCTGTGATTGCTCCCGTTGCTGCTCCTCTGGCTGCTCCTGTGGTG
GCGAAGTACGCGGCTACTCCTCTGGCTGCACCACTGGCCTACTCCTCTCC
TTTGGCTTACTCCGCACCACTGAGCTACGCCGCTGCTTCAGGACCGCTCC
TTATCTAAATTACTAAGCTGTGATCACATCGGAGACAACGATAATAAATG
GAGATATAATAAGACGTTAAAAAAAAAAAAAAAAAA

MIP13993.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-RB 606 CG32214-RB 110..528 1..419 2095 100 Plus
CG32214.a 818 CG32214.a 110..528 1..419 2095 100 Plus
CG12519-RA 747 CG12519-RA 502..698 223..419 835 94.9 Plus
CG12519-RA 747 CG12519-RA 328..488 76..236 670 94.4 Plus
CG12519-RA 747 CG12519-RA 242..352 8..118 435 92.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:16:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19456893..19457291 20..418 1950 99.2 Plus
chr3L 24539361 chr3L 19461270..19461529 279..20 1300 100 Minus
chr3L 24539361 chr3L 19465384..19465643 20..279 1285 99.6 Plus
chr3L 24539361 chr3L 19462281..19462476 223..418 845 95.4 Plus
chr3L 24539361 chr3L 19456150..19456374 236..30 715 88.9 Minus
chr3L 24539361 chr3L 19462043..19462267 30..236 700 88.4 Plus
chr3L 24539361 chr3L 19464646..19464870 236..30 700 88.4 Minus
chr3L 24539361 chr3L 19412344..19412723 415..45 665 80.1 Minus
chr3L 24539361 chr3L 19476190..19476403 402..188 620 87 Minus
chr3L 24539361 chr3L 19467032..19467183 418..267 550 90.8 Minus
chr3L 24539361 chr3L 19461136..19461286 374..224 545 90.7 Minus
chr3L 24539361 chr3L 19465627..19465777 224..374 545 90.7 Plus
chr3L 24539361 chr3L 19413331..19413469 79..217 485 89.9 Plus
chr3L 24539361 chr3L 19467855..19467993 79..217 470 89.2 Plus
chr3L 24539361 chr3L 19477537..19477680 79..231 295 81 Plus
chr3L 24539361 chr3L 19477480..19477558 40..118 290 91.1 Plus
chr3L 24539361 chr3L 19414163..19414242 132..211 265 88.8 Plus
chr3L 24539361 chr3L 19453846..19453931 216..131 205 82.6 Minus
chr3L 24539361 chr3L 19413274..19413329 40..95 190 89.3 Plus
chr3L 24539361 chr3L 19467798..19467853 40..95 190 89.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 20:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
CR32205-RA 1085 CR32205-RA 140..278 217..79 485 89.9 Minus
pncr009:3L-RA 961 CR33940-RA 807..952 256..402 470 89.1 Plus
CR32205-RA 1085 CR32205-RA 793..921 202..332 335 86.2 Plus
CR32205-RA 1085 CR32205-RA 935..1008 346..419 325 95.9 Plus
CR32205-RA 1085 CR32205-RA 699..817 120..238 295 83.1 Plus
CR32205-RA 1085 CR32205-RA 257..335 118..40 290 91.1 Minus
pncr009:3L-RA 961 CR33940-RA 266..344 118..40 275 89.8 Minus
pncr009:3L-RA 961 CR33940-RA 202..287 164..79 235 84.8 Minus
pncr009:3L-RA 961 CR33940-RA 144..202 231..173 190 88.1 Minus
pncr009:3L-RA 961 CR33940-RA 739..790 188..239 185 90.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19467471..19467870 20..419 2000 100 Plus
3L 28110227 3L 19471847..19472106 279..20 1300 100 Minus
3L 28110227 3L 19475961..19476220 20..279 1270 99.2 Plus
3L 28110227 3L 19472858..19473054 223..419 835 94.9 Plus
3L 28110227 3L 19472620..19472844 30..236 700 88.4 Plus
3L 28110227 3L 19475223..19475447 236..30 700 88.4 Minus
3L 28110227 3L 19422915..19423298 419..45 685 80.3 Minus
3L 28110227 3L 19466728..19466952 236..30 685 88 Minus
3L 28110227 3L 19486755..19486968 402..188 590 86 Minus
3L 28110227 3L 19476204..19476354 224..374 545 90.7 Plus
3L 28110227 3L 19471713..19471863 374..224 545 90.7 Minus
3L 28110227 3L 19477608..19477760 419..267 540 90.2 Minus
3L 28110227 3L 19423906..19424044 79..217 485 89.9 Plus
3L 28110227 3L 19478430..19478568 79..217 485 89.9 Plus
3L 28110227 3L 19488102..19488245 79..231 295 81 Plus
3L 28110227 3L 19488045..19488123 40..118 275 89.9 Plus
3L 28110227 3L 19424757..19424836 132..211 265 88.8 Plus
3L 28110227 3L 19464433..19464518 216..131 205 82.6 Minus
3L 28110227 3L 19478373..19478428 40..95 205 91.1 Plus
3L 28110227 3L 19423849..19423904 40..95 190 89.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19460571..19460970 20..419 2000 100 Plus
3L 28103327 3L 19464947..19465206 279..20 1300 100 Minus
3L 28103327 3L 19469061..19469320 20..279 1270 99.2 Plus
3L 28103327 3L 19465958..19466154 223..419 835 94.9 Plus
3L 28103327 3L 19465784..19465944 76..236 670 94.4 Plus
3L 28103327 3L 19468323..19468483 236..76 670 94.4 Minus
3L 28103327 3L 19459828..19459988 236..76 655 93.7 Minus
3L 28103327 3L 19469304..19469454 224..374 545 90.7 Plus
3L 28103327 3L 19464813..19464963 374..224 545 90.7 Minus
3L 28103327 3L 19470708..19470860 419..267 540 90.1 Minus
3L 28103327 3L 19417006..19417144 79..217 485 89.9 Plus
3L 28103327 3L 19471530..19471668 79..217 485 89.9 Plus
3L 28103327 3L 19479855..19480000 402..256 470 89.1 Minus
3L 28103327 3L 19465720..19465808 30..118 400 96.6 Plus
3L 28103327 3L 19468459..19468547 118..30 400 96.6 Minus
3L 28103327 3L 19459964..19460052 118..30 400 96.6 Minus
3L 28103327 3L 19416102..19416230 332..202 335 86.2 Minus
3L 28103327 3L 19416015..19416088 419..346 325 95.9 Minus
3L 28103327 3L 19471473..19471551 40..118 305 92.4 Plus
3L 28103327 3L 19416206..19416324 238..120 295 83.1 Minus
3L 28103327 3L 19416949..19417027 40..118 290 91.1 Plus
3L 28103327 3L 19481145..19481223 40..118 275 89.8 Plus
3L 28103327 3L 19417857..19417936 132..211 265 88.7 Plus
3L 28103327 3L 19481202..19481287 79..164 235 84.8 Plus
3L 28103327 3L 19457533..19457618 216..131 205 82.5 Minus
3L 28103327 3L 19481287..19481345 173..231 190 88.1 Plus
3L 28103327 3L 19480017..19480068 239..188 185 90.3 Minus
3L 28103327 3L 19468253..19468309 279..223 165 85.9 Minus
3L 28103327 3L 19417811..19417863 47..99 160 86.7 Plus
3L 28103327 3L 19470855..19470926 116..45 150 80.5 Minus
3L 28103327 3L 19468223..19468270 270..223 150 87.5 Minus
Blast to na_te.dros performed 2019-03-16 12:16:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2764..2999 249..21 152 57.5 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2777..2891 150..33 151 60.2 Minus

MIP13993.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:17:13 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19456815..19456833 1..19 100 -> Plus
chr3L 19456893..19457291 20..418 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:56:03 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 1..351 8..358 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:35:29 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 1..351 8..358 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:23:25 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 1..351 8..358 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:41:07 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 1..351 8..358 100   Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:48 has no hits.
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 16:36:14 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
825-Oak-RB 45..325 1..281 99 <- Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:35:29 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 45..462 1..418 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:23:25 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 48..465 1..418 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:41:07 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
CG32214-RB 48..465 1..418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:13 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19467393..19467411 1..19 100 -> Plus
3L 19467471..19467869 20..418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:13 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19467393..19467411 1..19 100 -> Plus
3L 19467471..19467869 20..418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:17:13 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19467393..19467411 1..19 100 -> Plus
3L 19467471..19467869 20..418 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:23:25 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19460493..19460511 1..19 100 -> Plus
arm_3L 19460571..19460969 20..418 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:19:04 Download gff for MIP13993.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19460571..19460969 20..418 100   Plus
3L 19460493..19460511 1..19 100 -> Plus

MIP13993.hyp Sequence

Translation from 0 to 357

> MIP13993.hyp
FTMFKYAVVVLALVACAAAKPGLLGAPLAYTAPLAYSAPAAVVAAPAPVV
TATSSQVIARNYNGIAAAPVIAPVAAPLAAPVVAKYAATPLAAPLAYSSP
LAYSAPLSYAAASGPLLI*

MIP13993.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-PC 116 CG32214-PC 1..116 3..118 562 100 Plus
CG32214-PB 116 CG32214-PB 1..116 3..118 562 100 Plus
825-Oak-PB 129 CG32208-PB 1..129 3..118 523 87.6 Plus
CG32213-PB 129 CG32213-PB 1..129 3..118 520 86.8 Plus
CG12519-PB 131 CG12519-PB 1..131 3..118 498 84 Plus

MIP13993.pep Sequence

Translation from 1 to 357

> MIP13993.pep
FTMFKYAVVVLALVACAAAKPGLLGAPLAYTAPLAYSAPAAVVAAPAPVV
TATSSQVIARNYNGIAAAPVIAPVAAPLAAPVVAKYAATPLAAPLAYSSP
LAYSAPLSYAAASGPLLI*

MIP13993.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23675-PA 108 GF23675-PA 1..100 3..111 260 66.1 Plus
Dana\GF23676-PA 120 GF23676-PA 1..120 3..118 231 75.2 Plus
Dana\GF10759-PA 139 GF10759-PA 1..137 3..101 218 65 Plus
Dana\GF23674-PA 140 GF23674-PA 1..140 3..118 199 67.4 Plus
Dana\GF23677-PA 132 GF23677-PA 1..111 3..86 190 67.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:55:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13407-PA 135 GG13407-PA 1..135 3..118 312 67.4 Plus
Dere\GG13406-PA 105 GG13406-PA 1..105 3..118 311 75.8 Plus
Dere\GG16035-PA 121 GG16035-PA 1..121 3..118 301 67.6 Plus
Dere\GG16037-PA 134 GG16037-PA 1..134 3..118 158 65.9 Plus
Dere\GG13408-PA 155 GG13408-PA 43..140 20..111 151 76.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:55:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24646-PA 120 GH24646-PA 1..120 3..118 214 67.7 Plus
Dgri\GH22597-PA 126 GH22597-PA 1..126 3..118 206 66.9 Plus
Dgri\GH22599-PA 120 GH22599-PA 1..120 3..118 197 64.6 Plus
Dgri\GH22596-PA 120 GH22596-PA 1..120 3..118 197 64.6 Plus
Dgri\GH22595-PA 129 GH22595-PA 1..97 3..96 196 55.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG32214-PC 116 CG32214-PC 1..116 3..118 562 100 Plus
CG32214-PB 116 CG32214-PB 1..116 3..118 562 100 Plus
825-Oak-PB 129 CG32208-PB 1..129 3..118 523 87.6 Plus
CG32213-PB 129 CG32213-PB 1..129 3..118 520 86.8 Plus
CG12519-PB 131 CG12519-PB 1..131 3..118 498 84 Plus
CG12519-PA 131 CG12519-PA 1..131 3..118 498 84 Plus
CG18294-PA 141 CG18294-PA 1..141 3..118 429 71.6 Plus
CG14096-PA 122 CG14096-PA 1..122 3..118 418 74.6 Plus
CG32212-PA 111 CG32212-PA 1..111 3..118 299 64.8 Plus
CG14095-PA 162 CG14095-PA 1..113 3..117 294 57.4 Plus
CG13678-PA 128 CG13678-PA 1..126 3..118 217 49.2 Plus
CG13679-PB 119 CG13679-PB 5..117 7..118 195 50.9 Plus
CG13068-PA 109 CG13068-PA 1..98 3..111 190 50.4 Plus
CG13674-PB 137 CG13674-PB 5..135 7..118 182 43 Plus
CG13674-PA 137 CG13674-PA 5..135 7..118 182 43 Plus
CG13047-PB 170 CG13047-PB 1..120 3..116 175 43.8 Plus
CG13044-PA 155 CG13044-PA 1..143 3..117 171 40.7 Plus
CG13069-PA 97 CG13069-PA 1..93 3..107 163 45.5 Plus
Cpr64Ad-PB 247 CG1259-PB 49..137 21..113 152 47.4 Plus
CG13049-PA 181 CG13049-PA 75..176 12..115 148 42.5 Plus
CG13049-PA 181 CG13049-PA 2..111 6..115 137 38.8 Plus
CG13066-PB 93 CG13066-PB 5..88 6..96 135 44.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11789-PA 104 GI11789-PA 1..99 3..106 266 69.2 Plus
Dmoj\GI13530-PA 164 GI13530-PA 34..164 2..118 194 62.8 Plus
Dmoj\GI11787-PA 161 GI11787-PA 1..62 3..72 145 62.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:55:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20932-PA 139 GL20932-PA 1..125 3..109 216 59.5 Plus
Dper\GL20934-PA 62 GL20934-PA 1..55 3..63 159 60.7 Plus
Dper\GL20898-PA 151 GL20898-PA 1..147 3..111 135 42 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28229-PA 126 GA28229-PA 1..112 3..109 182 72.9 Plus
Dpse\GA28232-PA 151 GA28232-PA 1..147 3..111 159 41.4 Plus
Dpse\GA28633-PA 187 GA28633-PA 1..56 3..64 156 75.8 Plus
Dpse\GA28633-PA 187 GA28633-PA 90..185 7..107 152 80.4 Plus
Dpse\GA28230-PA 131 GA28230-PA 11..127 1..111 143 68.9 Plus
Dpse\GA28228-PA 131 GA28228-PA 11..127 1..111 143 68.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:55:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19525-PA 182 GM19525-PA 93..182 42..118 212 72.2 Plus
Dsec\GM18729-PA 154 GM18729-PA 1..65 3..74 147 68.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14802-PA 179 GD14802-PA 35..128 2..95 408 96.8 Plus
Dsim\GD12281-PA 135 GD12281-PA 1..118 3..109 217 84.7 Plus
Dsim\GD14804-PA 151 GD14804-PA 35..151 2..118 209 94.9 Plus
Dsim\GD12284-PA 170 GD12284-PA 35..170 2..118 200 80.1 Plus
Dsim\GD12282-PA 154 GD12282-PA 1..78 3..88 135 62.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:55:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13492-PA 122 GJ13492-PA 1..92 3..95 174 72.3 Plus
Dvir\GJ13493-PA 110 GJ13493-PA 1..103 3..106 160 73.3 Plus
Dvir\GJ11892-PA 119 GJ11892-PA 1..119 3..118 160 65.3 Plus
Dvir\GJ13490-PA 140 GJ13490-PA 1..54 3..64 140 67.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20211-PA 128 GK20211-PA 1..128 3..118 203 55.8 Plus
Dwil\GK20201-PA 138 GK20201-PA 1..138 3..118 196 51 Plus
Dwil\GK20194-PA 142 GK20194-PA 1..126 3..109 196 55.3 Plus
Dwil\GK19523-PA 137 GK19523-PA 1..133 3..112 194 52.4 Plus
Dwil\GK19490-PA 142 GK19490-PA 1..126 3..109 190 52.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:55:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23008-PA 147 GE23008-PA 25..147 2..118 242 82.1 Plus
Dyak\GE15121-PA 142 GE15121-PA 25..142 2..118 230 81.4 Plus
Dyak\GE22502-PA 117 GE22502-PA 1..107 3..109 207 83.2 Plus
Dyak\GE23069-PA 145 GE23069-PA 25..145 2..118 177 79.3 Plus
Dyak\GE22779-PA 124 GE22779-PA 1..109 3..111 153 85.3 Plus