Clone Sequence Records
MIP14002.complete Sequence
1274 bp assembled on 2009-09-28
GenBank Submission: BT099889.1
> MIP14002.complete
CACTACACAATAGAACAAAATTCCAAAATATTGTTGTTTCAGGTCTAGGA
AATTCAAAATTTTTTTTTTGTTTTTGATAGAGCGACTGAGGATTCCCTAC
TCTAAGACAATTCCCAAGAGAACCTCAAGCTCAAATCTCAAATAAAATAT
GGCCGAGAAGAAATCCCAGGACAATAAGGATAATGTCAGTGGATCCCAGA
ATCGAACGAGCCGCGTGGAAGCCCATGTTCGCCAGCAAGAAGAGAATAAT
GCTATATTTGCTCGACTTTTTGCCAGTTTGGACGCTGAACATCGTAAATT
GAAAGAACTTGAAGAGCGCAGATCGCAGCTAATTGAAGAAATGAAAAATT
TGAGGTCTCTACTCTTTGTTGAGAATAAAAAACTTCGACAGACCGTTGCT
CCCATTTCGGGTGGAAATCCATTACCAATTCCAGCTACCAGTGCTAGTTC
CGTCGTGAAAAAGAGTTCGGAGAAACCTTCTGGCTCTAGGACCTCTCCCA
TTATCAAGTCAGCACGTTTGGAACGACGACCTTCCAATAAATCGGTTACA
ATTGCCGATCCACCAACACAAAGTTTAACGACTAGCGAAAGACCCAAGGC
AAGTAGTTCACAAGGTTTAAAGAAAAAGGAAAATCGACGAAGTCTCGTTG
TTCCAGCAAGGAAAAATAAACATAGAATAACTTTGGATAACTTATCAAAT
ACCAGAGAGGACATGTTAGACGAGTTCGATGAATCCGCATTGGCAACTTC
TGTGGGCTCCAATTTGCAGACTTTGGAGCAGCGAAGATCCAATTTAGAGG
AACGAGAAGATATAGACGAAGTTTTGGTCTCGCTGTCAGCATTATTCACC
TTTGTGGATTCTCAATTTACAGACCAGGCCATTTTACCAAGTACACCTGA
TACCGATGATTCCAAAACTGACGAAGTGATTCCCAATACCGATCAAGATC
CAAGTTTTTATCTCCCAAGTGCCGATTCTTTGTTCAAGGACATACTGGGA
CCGAATTCGCCATCCTTAGAGGTGAAATTGCCAGAAGAATCACTTCAATT
GCAACCAGCTGACATTGTCGAATGTTCAGCGAATGTGGCGGAAATCGTTG
AAAATGAACACGAAACGGAAACGGAAACGGAAACTGATTAAAAGCCCCCT
TTAAGGGTTTTTAAGACTAATCTAATGGTTAATTAAACTTGGAAGTGCAG
CTATTTACTAGATCTGGCAACAATATTAAACAAATACACACATTGAAGCC
AAAAAAAAAAAAAAAAAAAAAAAA
MIP14002.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:50:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32655-RA | 1291 | CG32655-RA | 39..1290 | 1..1252 | 6260 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:34:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chrX | 22417052 | chrX | 12126168..12126857 | 690..1 | 3315 | 98.7 | Minus |
| chrX | 22417052 | chrX | 12125542..12126106 | 1250..686 | 2795 | 99.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:34:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12235188..12235877 | 690..1 | 3435 | 99.9 | Minus |
| X | 23542271 | X | 12234560..12235126 | 1252..686 | 2835 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23527363 | X | 12243286..12243975 | 690..1 | 3435 | 99.8 | Minus |
| X | 23527363 | X | 12242658..12243224 | 1252..686 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:34:56 has no hits.
MIP14002.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:36:00 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chrX | 12125542..12126105 | 687..1250 | 99 | <- | Minus |
| chrX | 12126172..12126857 | 1..686 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:55:58 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:35:13 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:57:34 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:24:12 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 14:42:48 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:35:13 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..993 | 149..1141 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:57:34 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..1250 | 1..1250 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:24:12 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32655-RA | 1..1250 | 1..1250 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:36:00 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12234562..12235125 | 687..1250 | 100 | <- | Minus |
| X | 12235192..12235877 | 1..686 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:36:00 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12234562..12235125 | 687..1250 | 100 | <- | Minus |
| X | 12235192..12235877 | 1..686 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:36:00 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12234562..12235125 | 687..1250 | 100 | <- | Minus |
| X | 12235192..12235877 | 1..686 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:57:34 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12128595..12129158 | 687..1250 | 100 | <- | Minus |
| arm_X | 12129225..12129910 | 1..686 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:52 Download gff for
MIP14002.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12242660..12243223 | 687..1250 | 100 | <- | Minus |
| X | 12243290..12243975 | 1..686 | 100 | | Minus |
MIP14002.pep Sequence
Translation from 148 to 1140
> MIP14002.pep
MAEKKSQDNKDNVSGSQNRTSRVEAHVRQQEENNAIFARLFASLDAEHRK
LKELEERRSQLIEEMKNLRSLLFVENKKLRQTVAPISGGNPLPIPATSAS
SVVKKSSEKPSGSRTSPIIKSARLERRPSNKSVTIADPPTQSLTTSERPK
ASSSQGLKKKENRRSLVVPARKNKHRITLDNLSNTREDMLDEFDESALAT
SVGSNLQTLEQRRSNLEEREDIDEVLVSLSALFTFVDSQFTDQAILPSTP
DTDDSKTDEVIPNTDQDPSFYLPSADSLFKDILGPNSPSLEVKLPEESLQ
LQPADIVECSANVAEIVENEHETETETETD*
MIP14002.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:53:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF19508-PA | 504 | GF19508-PA | 46..127 | 18..101 | 243 | 57.1 | Plus |
| Dana\GF19508-PA | 504 | GF19508-PA | 248..453 | 148..323 | 161 | 32.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:53:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG19558-PA | 261 | GG19558-PA | 1..261 | 1..324 | 855 | 59.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:14:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32655-PA | 330 | CG32655-PA | 1..330 | 1..330 | 1637 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:53:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI21623-PA | 258 | GI21623-PA | 71..119 | 32..80 | 158 | 59.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM13149-PA | 243 | GM13149-PA | 1..192 | 1..218 | 824 | 78.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD15934-PA | 330 | GD15934-PA | 1..319 | 1..317 | 1448 | 88.7 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:53:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\GJ16563-PA | 237 | GJ16563-PA | 20..111 | 12..103 | 177 | 43.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:53:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE16718-PA | 329 | GE16718-PA | 1..329 | 1..328 | 1307 | 77.5 | Plus |
MIP14002.hyp Sequence
Translation from 148 to 1140
> MIP14002.hyp
MAEKKSQDNKDNVSGSQNRTSRVEAHVRQQEENNAIFARLFASLDAEHRK
LKELEERRSQLIEEMKNLRSLLFVENKKLRQTVAPISGGNPLPIPATSAS
SVVKKSSEKPSGSRTSPIIKSARLERRPSNKSVTIADPPTQSLTTSERPK
ASSSQGLKKKENRRSLVVPARKNKHRITLDNLSNTREDMLDEFDESALAT
SVGSNLQTLEQRRSNLEEREDIDEVLVSLSALFTFVDSQFTDQAILPSTP
DTDDSKTDEVIPNTDQDPSFYLPSADSLFKDILGPNSPSLEVKLPEESLQ
LQPADIVECSANVAEIVENEHETETETETD*
MIP14002.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:04:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32655-PA | 330 | CG32655-PA | 1..330 | 1..330 | 1637 | 100 | Plus |
