Clone Sequence Records
MIP14022.complete Sequence
1973 bp assembled on 2009-11-04
GenBank Submission: BT100243.1
> MIP14022.complete
CCACACAAGCGATACATCGTAAAGCGTCTAAATGTAAACAGCGTTGCGTA
TGACGTAGATGAATTGGACGCAGAGGTTAAACCCTCGCCTGGTGGAATGG
CATCCGTACGCAGGCCGCACAAGAGTATGGAATTTCTGCTGGACAAGGAG
AACCAGAAAAATATTCTGCGCATTGCCAGCAAATGGAAACAAAAAATTGA
TTGTTGGCCTTTGTTGAAATGGTAAGGTTCGATGAACTTCCTCTGACCGA
GTGTCCCCAAAGGAACACTTTTATACCGACTTCCAATTACTTATCTTCGC
GAAAGCAATTTCTTTATTTGCCGCTCACCACAAATAGTTTAATGGTTTAA
TGGCTAAAATGGGAGGCGTCGTTGTTGGCGTGTTGCCCAGGGCTAATTCA
AAAACAAAAGAAAGGAACTGAAATGCAAACTTTTTAATTTTAATTTTTAT
GTTTGGTCTGAAATACGCGTGGATTGACACCTTAATTATCCCAAAAAATG
TTTTTTTTTTATAAAAATATAATGCTGCGAAATAATTTTTAGTGGGCATG
TTTACAATGACACTTGTCGTTTCGTTTTTGTCGCTGAAAAATTCGAGATA
ATATATTCAAGTGAAAGTTATTAAATTCGACATTTTATATTATTTTCTTG
CTGTGAAACGTATTATTTAGTTCATAAATAATAATTGTCGATAAATGGCA
GGAAATAGAAAATGTTATGCCAATATAACTTTATAGCCTATTATTTTTCA
CGTACCTCTTCTTTTAGATTAAGTGAGTGCACCAGGTGTGCTCGGTAGCA
TATGGTAAACGCCAAACAGGTAGCTTTAATGGATTTGCCGGGTGTGCAAC
ATTTTGATTCTGAGTAGGCCCCCTTGGGACATATGGATTAGGGAAAACCT
ATCATTAAAACGGATTTAAAGAAATTCCATTAGGTTCCCGTTATTTGCTA
CCTGTTACAAAACATTTTGGTGTCCAGGTATGTAGGCATATAAACCGCGT
AATGAGAGAAACAATTTGTCTACCTGTTACATATGTATAAATAAGATTGG
GGCGCTGAAAACCAGCATCAGTTTTTAAAAGACTATCCTACCGACAAGAG
CACTTCTTCAATCAGCATTCTAAAACATCTGAGCAGTATGTCAGCATTCA
CCTGCACACAGTACCTAAACCTCAATTCGAAGGACGTTTCGTCAATGTCC
ACCACCGTTACATTAAACGCAGCCTGCTTTGGGCGGCAGGACTTGAACCT
ATTTATTGAGAGTCTAGAAACCATATCTCGCCTGGAAAGGGAGAGACACG
AGCGACGCCAGCTTCGGCGCGAGCAAAGACTACACCAGGCGCGAATTACT
GAGTTGGCGGACGAACGATGCTCCAGTCCGACACCCACAGCCGAGGAAGC
CGTAGACGAGCCGCTCTTATATCTGGAGGCCAAGTGCATACCGTATGCGG
TTTCTGGCCATATTTTTGCACAGGGCGACAACACACCTTGTCCCGAATAC
CATATGTGTGACGACGAAGCGTACGGAAGTGCTTCTTATTCAGCACGCAG
CAGCGTCACCTACTGTAGCTGTGGCGGAATCTCCAATCTGGATTCAGACA
GCGGAGAATCCGAAGGGAAGATGAAACCGTTTGTGCATCCGAGCTCCCAG
GCCAAACCAAAGAATAGGTATTCTTCAACGCGATCCCGCATAATTAACTT
GATGTTAAAGAGAAATAGGGCTAAGCCCGCTCTCATCGAGCATCTGCAGC
GACAGGGACACGGTGACACGTTATCCAGCGAGAACATCAGTCACCAGTTC
CCACGGCTTACTTCTAGCCAAAAAAGGTCGGCTGAGCATAGTTTTCTGGA
TAAGGCCCTTCGATATCTTACATTATAATAAGCTTCTTTGTGTAAATATA
ATGTTTTAGGTTTGTTTATAAAATATTTCAATACATTAAAGTTAATTGCC
ACAAAAAAAAAAAAAAAAAAAAA
MIP14022.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:41:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34137-RA | 818 | CG34137-RA | 6..818 | 1066..1878 | 4050 | 99.8 | Plus |
CG6448-RB | 6738 | CG6448-RB | 4392..4560 | 1..169 | 845 | 100 | Plus |
CG6448-RA | 7030 | CG6448-RA | 4834..5002 | 1..169 | 845 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:59:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 22149393..22151177 | 168..1952 | 8910 | 99.9 | Plus |
chr2L | 23010047 | chr2L | 22145366..22145533 | 1..168 | 840 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:59:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22150856..22152643 | 168..1955 | 8925 | 99.9 | Plus |
2L | 23513712 | 2L | 22146829..22146996 | 1..168 | 840 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 22150856..22152643 | 168..1955 | 8925 | 99.9 | Plus |
2L | 23513712 | 2L | 22146829..22146996 | 1..168 | 840 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 01:59:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mdg3 | 5519 | mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). | 2998..3155 | 644..485 | 129 | 59.6 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6866..7065 | 485..685 | 121 | 53.4 | Plus |
MIP14022.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:00:23 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 22145366..22145533 | 1..168 | 100 | -> | Plus |
chr2L | 22149394..22151177 | 169..1952 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 10:04:14 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 1..741 | 1138..1878 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:06 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RB | 1..741 | 1138..1878 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:57:56 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 1..741 | 1138..1878 | 99 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:54:12 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 1..741 | 1138..1878 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 10:04:14 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 3..818 | 1063..1878 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:06 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 3..892 | 1063..1952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:57:56 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 3..892 | 1063..1952 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:54:12 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34137-RA | 3..892 | 1063..1952 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22146829..22146996 | 1..168 | 100 | -> | Plus |
2L | 22150857..22152640 | 169..1952 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22146829..22146996 | 1..168 | 100 | -> | Plus |
2L | 22150857..22152640 | 169..1952 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22146829..22146996 | 1..168 | 100 | -> | Plus |
2L | 22150857..22152640 | 169..1952 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:57:56 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 22146829..22146996 | 1..168 | 100 | -> | Plus |
arm_2L | 22150857..22152640 | 169..1952 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:41 Download gff for
MIP14022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 22150857..22152640 | 169..1952 | 99 | | Plus |
2L | 22146829..22146996 | 1..168 | 100 | -> | Plus |
MIP14022.pep Sequence
Translation from 1137 to 1877
> MIP14022.pep
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*
MIP14022.pep Blast Records
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:53:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH10755-PA | 248 | GH10755-PA | 1..248 | 1..246 | 549 | 55.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
dunk-PB | 246 | CG34137-PB | 1..246 | 1..246 | 1277 | 100 | Plus |
dunk-PA | 246 | CG34137-PA | 1..246 | 1..246 | 1277 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:53:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI11628-PA | 257 | GI11628-PA | 1..257 | 1..246 | 597 | 55.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:53:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA28026-PA | 259 | GA28026-PA | 3..259 | 2..246 | 548 | 55 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:53:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16160-PA | 246 | GM16160-PA | 1..246 | 1..246 | 1146 | 93.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:53:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ12947-PA | 1715 | GJ12947-PA | 1466..1715 | 9..246 | 528 | 54.8 | Plus |
MIP14022.hyp Sequence
Translation from 1137 to 1877
> MIP14022.hyp
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*
MIP14022.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:56:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34137-PB | 246 | CG34137-PB | 1..246 | 1..246 | 1277 | 100 | Plus |
CG34137-PA | 246 | CG34137-PA | 1..246 | 1..246 | 1277 | 100 | Plus |