Clone MIP14022 Report

Search the DGRC for MIP14022

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:140
Well:22
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG34137-RA
Protein status:MIP14022.pep: gold
Sequenced Size:1973

Clone Sequence Records

MIP14022.complete Sequence

1973 bp assembled on 2009-11-04

GenBank Submission: BT100243.1

> MIP14022.complete
CCACACAAGCGATACATCGTAAAGCGTCTAAATGTAAACAGCGTTGCGTA
TGACGTAGATGAATTGGACGCAGAGGTTAAACCCTCGCCTGGTGGAATGG
CATCCGTACGCAGGCCGCACAAGAGTATGGAATTTCTGCTGGACAAGGAG
AACCAGAAAAATATTCTGCGCATTGCCAGCAAATGGAAACAAAAAATTGA
TTGTTGGCCTTTGTTGAAATGGTAAGGTTCGATGAACTTCCTCTGACCGA
GTGTCCCCAAAGGAACACTTTTATACCGACTTCCAATTACTTATCTTCGC
GAAAGCAATTTCTTTATTTGCCGCTCACCACAAATAGTTTAATGGTTTAA
TGGCTAAAATGGGAGGCGTCGTTGTTGGCGTGTTGCCCAGGGCTAATTCA
AAAACAAAAGAAAGGAACTGAAATGCAAACTTTTTAATTTTAATTTTTAT
GTTTGGTCTGAAATACGCGTGGATTGACACCTTAATTATCCCAAAAAATG
TTTTTTTTTTATAAAAATATAATGCTGCGAAATAATTTTTAGTGGGCATG
TTTACAATGACACTTGTCGTTTCGTTTTTGTCGCTGAAAAATTCGAGATA
ATATATTCAAGTGAAAGTTATTAAATTCGACATTTTATATTATTTTCTTG
CTGTGAAACGTATTATTTAGTTCATAAATAATAATTGTCGATAAATGGCA
GGAAATAGAAAATGTTATGCCAATATAACTTTATAGCCTATTATTTTTCA
CGTACCTCTTCTTTTAGATTAAGTGAGTGCACCAGGTGTGCTCGGTAGCA
TATGGTAAACGCCAAACAGGTAGCTTTAATGGATTTGCCGGGTGTGCAAC
ATTTTGATTCTGAGTAGGCCCCCTTGGGACATATGGATTAGGGAAAACCT
ATCATTAAAACGGATTTAAAGAAATTCCATTAGGTTCCCGTTATTTGCTA
CCTGTTACAAAACATTTTGGTGTCCAGGTATGTAGGCATATAAACCGCGT
AATGAGAGAAACAATTTGTCTACCTGTTACATATGTATAAATAAGATTGG
GGCGCTGAAAACCAGCATCAGTTTTTAAAAGACTATCCTACCGACAAGAG
CACTTCTTCAATCAGCATTCTAAAACATCTGAGCAGTATGTCAGCATTCA
CCTGCACACAGTACCTAAACCTCAATTCGAAGGACGTTTCGTCAATGTCC
ACCACCGTTACATTAAACGCAGCCTGCTTTGGGCGGCAGGACTTGAACCT
ATTTATTGAGAGTCTAGAAACCATATCTCGCCTGGAAAGGGAGAGACACG
AGCGACGCCAGCTTCGGCGCGAGCAAAGACTACACCAGGCGCGAATTACT
GAGTTGGCGGACGAACGATGCTCCAGTCCGACACCCACAGCCGAGGAAGC
CGTAGACGAGCCGCTCTTATATCTGGAGGCCAAGTGCATACCGTATGCGG
TTTCTGGCCATATTTTTGCACAGGGCGACAACACACCTTGTCCCGAATAC
CATATGTGTGACGACGAAGCGTACGGAAGTGCTTCTTATTCAGCACGCAG
CAGCGTCACCTACTGTAGCTGTGGCGGAATCTCCAATCTGGATTCAGACA
GCGGAGAATCCGAAGGGAAGATGAAACCGTTTGTGCATCCGAGCTCCCAG
GCCAAACCAAAGAATAGGTATTCTTCAACGCGATCCCGCATAATTAACTT
GATGTTAAAGAGAAATAGGGCTAAGCCCGCTCTCATCGAGCATCTGCAGC
GACAGGGACACGGTGACACGTTATCCAGCGAGAACATCAGTCACCAGTTC
CCACGGCTTACTTCTAGCCAAAAAAGGTCGGCTGAGCATAGTTTTCTGGA
TAAGGCCCTTCGATATCTTACATTATAATAAGCTTCTTTGTGTAAATATA
ATGTTTTAGGTTTGTTTATAAAATATTTCAATACATTAAAGTTAATTGCC
ACAAAAAAAAAAAAAAAAAAAAA

MIP14022.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RA 818 CG34137-RA 6..818 1066..1878 4050 99.8 Plus
CG6448-RB 6738 CG6448-RB 4392..4560 1..169 845 100 Plus
CG6448-RA 7030 CG6448-RA 4834..5002 1..169 845 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:59:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22149393..22151177 168..1952 8910 99.9 Plus
chr2L 23010047 chr2L 22145366..22145533 1..168 840 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:15:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:59:39
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22150856..22152643 168..1955 8925 99.9 Plus
2L 23513712 2L 22146829..22146996 1..168 840 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:23
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22150856..22152643 168..1955 8925 99.9 Plus
2L 23513712 2L 22146829..22146996 1..168 840 100 Plus
Blast to na_te.dros performed 2019-03-16 01:59:40
Subject Length Description Subject Range Query Range Score Percent Strand
mdg3 5519 mdg3 DMMDG3 5519bp Derived from X95908 (e990667) (Rel. 49, Last updated, Version 3). 2998..3155 644..485 129 59.6 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6866..7065 485..685 121 53.4 Plus

MIP14022.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:00:23 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22145366..22145533 1..168 100 -> Plus
chr2L 22149394..22151177 169..1952 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 10:04:14 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 1..741 1138..1878 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:06 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RB 1..741 1138..1878 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:57:56 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 1..741 1138..1878 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:54:12 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 1..741 1138..1878 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 10:04:14 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 3..818 1063..1878 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:06 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 3..892 1063..1952 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:57:56 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 3..892 1063..1952 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:54:12 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 3..892 1063..1952 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22146829..22146996 1..168 100 -> Plus
2L 22150857..22152640 169..1952 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22146829..22146996 1..168 100 -> Plus
2L 22150857..22152640 169..1952 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:23 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22146829..22146996 1..168 100 -> Plus
2L 22150857..22152640 169..1952 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:57:56 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22146829..22146996 1..168 100 -> Plus
arm_2L 22150857..22152640 169..1952 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:41 Download gff for MIP14022.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22150857..22152640 169..1952 99   Plus
2L 22146829..22146996 1..168 100 -> Plus

MIP14022.pep Sequence

Translation from 1137 to 1877

> MIP14022.pep
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*

MIP14022.pep Blast Records

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10755-PA 248 GH10755-PA 1..248 1..246 549 55.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
dunk-PB 246 CG34137-PB 1..246 1..246 1277 100 Plus
dunk-PA 246 CG34137-PA 1..246 1..246 1277 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:53:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11628-PA 257 GI11628-PA 1..257 1..246 597 55.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28026-PA 259 GA28026-PA 3..259 2..246 548 55 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:53:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16160-PA 246 GM16160-PA 1..246 1..246 1146 93.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:53:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12947-PA 1715 GJ12947-PA 1466..1715 9..246 528 54.8 Plus

MIP14022.hyp Sequence

Translation from 1137 to 1877

> MIP14022.hyp
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*

MIP14022.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:56:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-PB 246 CG34137-PB 1..246 1..246 1277 100 Plus
CG34137-PA 246 CG34137-PA 1..246 1..246 1277 100 Plus