BDGP Sequence Production Resources |
Search the DGRC for MIP14027
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 140 |
Well: | 27 |
Vector: | pOT2|pOTB7_DraIII |
Associated Gene/Transcript | Hsc20-RA |
Protein status: | MIP14027.pep: gold |
Sequenced Size: | 938 |
938 bp assembled on 2009-10-12
GenBank Submission: BT100022.1
> MIP14027.complete AAGGCTTCGATTGTGTATATCATTCAGTTAAATTTATTGTAGAAAATGAG TAGAGTTATTAATGGCTTTAAAAGTGCTGTAAAAGCTACAAATTATACAC CGCTTGTTAGAAATGCAGCACAATTTAATCAATTCCAGTTGCCAGAAATA CGGAAATTTTCAGTTGAATCTTCGCCGGCTTGTTGGAATTGCCAAAAGAA ATCGGAATTAAAGCAGAATATGATATGTTCGGACTGTGGACACTTGCAGG ATGTTAACTCAGGAATAAATTACTTTAAACTGCTCAGCTTTCCCATTCAA TTTTCTTTGGAGTCCCAGAAGTTGACAAGAAGTTTTCGCCAGTTGCAGAC CATTGTGCATCCCGATAAATATAGTAATAAAACCTCACGGGAGCAAACAA ACTCCTCAGACTGGAGTTCCCTCATCAACAAGGCATATAAAACGCTTTCC ACGCCCATAGATCGTGGTCAGTACCTTCTTCAACTGGAGGGCGAACAGAT GCCGCAGGATAATAGCGCTCTTAACAAAGAGTTTCTCATGGCCATGATGG AGCGGAACGAGGAGGTGGAGGATGCGGAAGACACCCAAACGCTGGAGAAT TTAAATATTCAGCTCATCAAGGAACTGGAGGAGATGGCCCGGAAGTTAAA TGCCCTTTTCGATAGCAAAGATCTTTCGGGAGTCAAAGAAACCCTCGTAG AGATGAAGTACCTGCTGAGTATTCAGAACAGCATTAAACAGAAGCAACAA AGTTTGCTGGGCAGCTGAATTGGCATTAATCGACTTGGCAATCGGTTCTG ATCGCACACACACACGTCCGCCTGTTGCTATCTATCAGCTGTTAAGTAAA CAATAACACAGACTTCGTTTGTTTTATAATGTGAATAAAAATCGCGACTG AACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG34246-RA | 799 | CG34246-RA | 32..799 | 1..768 | 3840 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16223327..16223849 | 381..903 | 2555 | 99.2 | Plus |
chr3L | 24539361 | chr3L | 16222835..16223101 | 1..267 | 1335 | 100 | Plus |
chr3L | 24539361 | chr3L | 16223154..16223266 | 268..380 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16233643..16234166 | 381..904 | 2620 | 100 | Plus |
3L | 28110227 | 3L | 16233151..16233417 | 1..267 | 1335 | 100 | Plus |
3L | 28110227 | 3L | 16233470..16233582 | 268..380 | 565 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16226743..16227266 | 381..904 | 2620 | 100 | Plus |
3L | 28103327 | 3L | 16226251..16226517 | 1..267 | 1335 | 100 | Plus |
3L | 28103327 | 3L | 16226570..16226682 | 268..380 | 565 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16222835..16223101 | 1..267 | 100 | -> | Plus |
chr3L | 16223154..16223266 | 268..380 | 100 | -> | Plus |
chr3L | 16223327..16223849 | 381..903 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34246-RA | 1..723 | 46..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34246-RA | 1..723 | 46..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsc20-RA | 1..723 | 46..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsc20-RA | 1..723 | 46..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34246-RA | 32..799 | 1..768 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34246-RA | 32..934 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsc20-RA | 25..927 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hsc20-RA | 25..927 | 1..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16233151..16233417 | 1..267 | 100 | -> | Plus |
3L | 16233470..16233582 | 268..380 | 100 | -> | Plus |
3L | 16233643..16234165 | 381..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16233151..16233417 | 1..267 | 100 | -> | Plus |
3L | 16233470..16233582 | 268..380 | 100 | -> | Plus |
3L | 16233643..16234165 | 381..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16233151..16233417 | 1..267 | 100 | -> | Plus |
3L | 16233470..16233582 | 268..380 | 100 | -> | Plus |
3L | 16233643..16234165 | 381..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16226251..16226517 | 1..267 | 100 | -> | Plus |
arm_3L | 16226570..16226682 | 268..380 | 100 | -> | Plus |
arm_3L | 16226743..16227265 | 381..903 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16226251..16226517 | 1..267 | 100 | -> | Plus |
3L | 16226570..16226682 | 268..380 | 100 | -> | Plus |
3L | 16226743..16227265 | 381..903 | 100 | Plus |
Translation from 45 to 767
> MIP14027.pep MSRVINGFKSAVKATNYTPLVRNAAQFNQFQLPEIRKFSVESSPACWNCQ KKSELKQNMICSDCGHLQDVNSGINYFKLLSFPIQFSLESQKLTRSFRQL QTIVHPDKYSNKTSREQTNSSDWSSLINKAYKTLSTPIDRGQYLLQLEGE QMPQDNSALNKEFLMAMMERNEEVEDAEDTQTLENLNIQLIKELEEMARK LNALFDSKDLSGVKETLVEMKYLLSIQNSIKQKQQSLLGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24163-PA | 182 | GF24163-PA | 1..182 | 59..240 | 735 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15965-PA | 261 | GG15965-PA | 134..261 | 113..240 | 584 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15859-PA | 174 | GH15859-PA | 8..173 | 75..240 | 649 | 73.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hsc20-PA | 240 | CG34246-PA | 1..240 | 1..240 | 1219 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12642-PA | 179 | GI12642-PA | 1..177 | 59..240 | 673 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17838-PA | 241 | GL17838-PA | 1..240 | 1..240 | 807 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28504-PA | 241 | GA28504-PA | 1..240 | 1..240 | 798 | 66.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25599-PA | 182 | GM25599-PA | 1..182 | 59..240 | 928 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14607-PA | 182 | GD14607-PA | 1..182 | 59..240 | 932 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12761-PA | 184 | GJ12761-PA | 19..184 | 75..240 | 620 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16550-PA | 263 | GK16550-PA | 80..261 | 59..240 | 605 | 64.3 | Plus |
Translation from 45 to 767
> MIP14027.hyp MSRVINGFKSAVKATNYTPLVRNAAQFNQFQLPEIRKFSVESSPACWNCQ KKSELKQNMICSDCGHLQDVNSGINYFKLLSFPIQFSLESQKLTRSFRQL QTIVHPDKYSNKTSREQTNSSDWSSLINKAYKTLSTPIDRGQYLLQLEGE QMPQDNSALNKEFLMAMMERNEEVEDAEDTQTLENLNIQLIKELEEMARK LNALFDSKDLSGVKETLVEMKYLLSIQNSIKQKQQSLLGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hsc20-PA | 240 | CG34246-PA | 1..240 | 1..240 | 1219 | 100 | Plus |