MIP14126.complete Sequence
870 bp assembled on 2009-10-12
GenBank Submission: BT100030.1
> MIP14126.complete
TATAAAATGAATCGATTATTTCGGAGTCACCCATTTTTTAATCAAGCAAC
AGGCTTCCAAATCGAACGTTTCCATTTAGATACTACCCAACCCATCTCTC
ACGCAGACCGAAGCATTCAGGGAAACTAAGCAGCAGAAGAAGCCAGCGAG
AACTGGTGAGGATCTGAGATGGGTACCTCTGTATTGGCCACGATGTGTGC
TGAGCGCCTGACCAAGCTCCTCGTCCGCTACTCCCGTGCTCAGCCTCCCG
TGGGGCGGAATCAGTCCCACTGCGTCGATAATGTGCTAAGTCCTTTGCCA
AGGAGCGAAGCAACTACCGCCTTCCTGAAGCCAATGAACAATGCTGGCCA
GGACCATCCCCCATCGAAGTCGGCCAACAAGTGGCAGCCGATGGGTACCA
TCACGAGCATCGGACAGAGATTCCAGCGTGAGGCCATGGATGAGATTTGT
GCCAGGGCCAAGGACCGCCTGCTGCCAAAGACCGAACCTCGACGCTTGAA
CTTCTCTAGAAATCACGCTTTCTTCCCCAACAAATCGAGAGGCCTTGAAG
ATTGGAAGAAACCGGAGGGTGGGCGGTACTCAGCTCCATTTGTCAGCCTA
TTCCAGGCTCCGAACTGTCCTAGTCTGCCTAAGAAGTCGTTTTCTCATCC
GCTTGCCTTCGATCGTCAAAAACTGTATCGAGACTGCTATTAACCAGAAA
AAAATGAAAGTTTTCGATCCTGATGCCAAACTCATACGCAGACCAATTAC
TCCACGCTCATTTTAGCGTAGTGATTGGGTTGCACTTGCGATTGGCATCA
GGGGTCCAAGATTCTCCACAATTAGCCGTATTAAAGATGTAATGTGTAAA
AAAAAAAAAAAAAAAAAAAA
MIP14126.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:54:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-RA | 869 | whip-RA | 14..863 | 1..850 | 4250 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:00:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 4249882..4250728 | 847..1 | 4205 | 99.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:00:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8362356..8363205 | 850..1 | 4250 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 8363555..8364404 | 850..1 | 4250 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 21:00:50 has no hits.
MIP14126.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:01:47 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 4249882..4250728 | 1..847 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:38 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34218-RA | 1..501 | 193..693 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:43:30 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 1..501 | 193..693 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:34:04 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 1..501 | 193..693 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:40:12 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 1..501 | 193..693 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-12 14:24:08 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34218-RA | 14..860 | 1..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:43:30 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 14..860 | 1..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:34:04 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 14..860 | 1..847 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:12 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
whip-RA | 14..860 | 1..847 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:01:47 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8362359..8363205 | 1..847 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:01:47 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8362359..8363205 | 1..847 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:01:47 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8362359..8363205 | 1..847 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:34:04 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4249864..4250710 | 1..847 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:23 Download gff for
MIP14126.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8363558..8364404 | 1..847 | 100 | | Minus |
MIP14126.hyp Sequence
Translation from 168 to 692
> MIP14126.hyp
MGTSVLATMCAERLTKLLVRYSRAQPPVGRNQSHCVDNVLSPLPRSEATT
AFLKPMNNAGQDHPPSKSANKWQPMGTITSIGQRFQREAMDEICARAKDR
LLPKTEPRRLNFSRNHAFFPNKSRGLEDWKKPEGGRYSAPFVSLFQAPNC
PSLPKKSFSHPLAFDRQKLYRDCY*
MIP14126.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-PA | 166 | CG34218-PA | 1..166 | 9..174 | 899 | 100 | Plus |
MIP14126.pep Sequence
Translation from 168 to 692
> MIP14126.pep
MGTSVLATMCAERLTKLLVRYSRAQPPVGRNQSHCVDNVLSPLPRSEATT
AFLKPMNNAGQDHPPSKSANKWQPMGTITSIGQRFQREAMDEICARAKDR
LLPKTEPRRLNFSRNHAFFPNKSRGLEDWKKPEGGRYSAPFVSLFQAPNC
PSLPKKSFSHPLAFDRQKLYRDCY*
MIP14126.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:33:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF12595-PA | 182 | GF12595-PA | 1..182 | 1..174 | 315 | 42.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:33:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG10653-PA | 166 | GG10653-PA | 1..166 | 9..174 | 806 | 90.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
whip-PA | 166 | CG34218-PA | 1..166 | 9..174 | 899 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20698-PA | 174 | GM20698-PA | 1..174 | 1..174 | 875 | 94.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:33:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15281-PA | 174 | GD15281-PA | 1..174 | 1..174 | 862 | 93.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:34:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE23124-PA | 174 | GE23124-PA | 1..174 | 1..174 | 843 | 89.1 | Plus |