Clone MIP14129 Report

Search the DGRC for MIP14129

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:141
Well:29
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG44005-RA
Protein status:MIP14129.pep: gold
Sequenced Size:1424

Clone Sequence Records

MIP14129.complete Sequence

1424 bp assembled on 2010-02-01

GenBank Submission: BT120290.1

> MIP14129.complete
TTTTGCACCAGTCTTGCGTTTGGCCTTCGCTCTCGAGGGTATGGGGTACC
TGCAATGAGAAATCAACGGACTATAACCGATTTGCCATTCGAAGTGCTCG
ATATCATATTTAGTAACTTACGAAATCTAAGGGACAAACTTCGACTGGCG
CAGGTTGATGATTATCTGGGAAAAGCGTTTTCGTACCACAGCCGCAGTGA
TTACAAGAAGTTCTCACCAAAAATACATTTTCCCGTTCGACTTTATCGAG
TTCTGCTGGCGAATTGTGGCCCTTCCATTGTGGAATTTACCTGTGGATCG
GACACCTGGAGCGATCTGTTGGCCAAATCGATTGCGAAGTACTGTCCCAA
CCTGGAGTCGGTGAACATCAGTGCTACATTAAGAAATAGTCACAGTCTTC
AATTTTTTCTATTGAATTTGGCGAATTCTTTAATATCGGTCGAACTGAAG
CTCAACGATAGTTGCCAATCGCCGAGGATACTTAATGCCGTCGCCGAGCT
GAAACACTTGAAAAAATTCTTGTATGAAGGATACATTGACCGGGGAGTTA
ATCAGCTGTGCAAACTGGTTGATCTGGAGGAGCTGCAACTCATCTATCAA
GGTAGAGGATATAGATGCAGAGCAGTTAATCTTCTTCAAATTTGCGGAAA
TATGACAAATCTTCGGCGTTTGACTGTGAGCAATATATCGATATCTCAAC
CAGAAAGCTTCCATCCCATGATATGGCCAAACTTAAAAGATTTGAAAATG
CAAAATTGCGAAATCTCCACAGTGATGCCCGATTGTCCCAAGCTGAAAAC
CTTATATATCAAATTCTGCAAATGTAGAATCAAAGGATATGTATGCAGTT
TTATTTTGAAAAACGGCAATAATATCGAGGAAATCGATGAAAGCTGTGAA
CCGGCACCATTTGATGGCCAGAGTTTCCTTCAAGTCATTCGAAGCTGTCC
AAAATTGCAAGTGTTGTCCACTCAAATGGGGGGTATCAAGATCTACCAAG
CTTTTGTTACATCCGTAGTGGATATTCTCAAGGAGACTGCATCAACGCGA
AAAGAACCCTTCGAGCTGATATTGTACTGCCGAGACAAGCTTAGATGGTT
TCGACGATTTTTACAACGGACTTCTAATCCTGAAGTGATTCATACGCTTT
ACCTGTACAAGTTTTAAGGACTGGCAAATTGTATATCAGAAAACACAAAA
CAATTAATTATAAATATATTTTAATTTTTATTTAACCTGTATAGAACGAT
TGTACAATTTGTAAAACTTAGAAAATATTTGATTTTTATTTTTTAAATTG
TATTGAATTAGAACTGAATAACAATAATTGCATATATCTATCTAATGTTA
CTAATATAAATTTATAAATTTATTTAAACTACATTAAACTTATAATATTT
ATAAATAAAAAAAAAAAAAAAAAA

MIP14129.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG34252.a 2492 CG34252.a 1077..2484 1..1408 7040 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:22:01
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18060340..18060904 1110..546 2825 100 Minus
chr3L 24539361 chr3L 18061253..18061803 551..1 2740 99.8 Minus
chr3L 24539361 chr3L 18059980..18060275 1406..1111 1480 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18070660..18071224 1110..546 2825 100 Minus
3L 28110227 3L 18071573..18072123 551..1 2740 99.8 Minus
3L 28110227 3L 18070298..18070595 1408..1111 1490 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18063760..18064324 1110..546 2825 100 Minus
3L 28103327 3L 18064673..18065223 551..1 2740 99.8 Minus
3L 28103327 3L 18063398..18063695 1408..1111 1490 100 Minus
Blast to na_te.dros performed 2019-03-16 10:22:00
Subject Length Description Subject Range Query Range Score Percent Strand
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6932..7136 1208..1395 142 56.3 Plus
Stalker2 7672 Stalker2 STALKER2 7672bp 1380..1538 1375..1212 133 57.2 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 1..98 1299..1395 127 61.6 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 6919..7145 1162..1392 127 55.5 Plus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 31..107 1317..1392 121 65.4 Plus

MIP14129.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:23:10 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18060340..18060902 548..1110 100 <- Minus
chr3L 18061257..18061803 1..547 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-02-03 11:20:45 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG34252-RA 619..1785 1..1167 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:28 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG34252-RA 619..1785 1..1167 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:35:40 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG44005-RA 1..1113 55..1167 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:05:48 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG44005-RA 1..1113 55..1167 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:20:45 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG34252-RA 619..2024 1..1406 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:28 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG34252-RA 619..2024 1..1406 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:35:40 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG44005-RB 1..1406 1..1406 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:05:48 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
CG44005-RB 1..1406 1..1406 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18070300..18070595 1111..1406 100 <- Minus
3L 18070660..18071222 548..1110 100 <- Minus
3L 18071577..18072123 1..547 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18070300..18070595 1111..1406 100 <- Minus
3L 18070660..18071222 548..1110 100 <- Minus
3L 18071577..18072123 1..547 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18070300..18070595 1111..1406 100 <- Minus
3L 18070660..18071222 548..1110 100 <- Minus
3L 18071577..18072123 1..547 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:35:40 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18063400..18063695 1111..1406 100 <- Minus
arm_3L 18063760..18064322 548..1110 100 <- Minus
arm_3L 18064677..18065223 1..547 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:57 Download gff for MIP14129.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18063400..18063695 1111..1406 100 <- Minus
3L 18063760..18064322 548..1110 100 <- Minus
3L 18064677..18065223 1..547 100   Minus

MIP14129.pep Sequence

Translation from 0 to 1166

> MIP14129.pep
FCTSLAFGLRSRGYGVPAMRNQRTITDLPFEVLDIIFSNLRNLRDKLRLA
QVDDYLGKAFSYHSRSDYKKFSPKIHFPVRLYRVLLANCGPSIVEFTCGS
DTWSDLLAKSIAKYCPNLESVNISATLRNSHSLQFFLLNLANSLISVELK
LNDSCQSPRILNAVAELKHLKKFLYEGYIDRGVNQLCKLVDLEELQLIYQ
GRGYRCRAVNLLQICGNMTNLRRLTVSNISISQPESFHPMIWPNLKDLKM
QNCEISTVMPDCPKLKTLYIKFCKCRIKGYVCSFILKNGNNIEEIDESCE
PAPFDGQSFLQVIRSCPKLQVLSTQMGGIKIYQAFVTSVVDILKETASTR
KEPFELILYCRDKLRWFRRFLQRTSNPEVIHTLYLYKF*

MIP14129.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:58:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25219-PA 388 GF25219-PA 1..331 19..368 391 28.5 Plus
Dana\GF23620-PA 400 GF23620-PA 7..246 25..271 206 26.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:58:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15760-PA 398 GG15760-PA 25..398 12..388 1807 90.7 Plus
Dere\GG15761-PA 348 GG15761-PA 83..276 198..385 463 47.2 Plus
Dere\GG15761-PA 348 GG15761-PA 1..182 19..184 327 42.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG44005-PB 370 CG44005-PB 1..370 19..388 1940 100 Plus
CG44005-PA 370 CG44005-PA 1..370 19..388 1940 100 Plus
CG44006-PA 374 CG44006-PA 1..372 19..388 860 47.2 Plus
CG44004-PC 368 CG44004-PC 1..365 19..385 655 39.2 Plus
CG44004-PB 368 CG44004-PB 1..365 19..385 655 39.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22727-PA 638 GL22727-PA 1..382 16..384 500 31.1 Plus
Dper\GL22727-PA 638 GL22727-PA 445..528 287..370 176 36.9 Plus
Dper\GL21697-PA 428 GL21697-PA 4..243 25..271 166 25.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:58:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23397-PA 383 GA23397-PA 1..375 16..380 517 31.1 Plus
Dpse\GA26373-PA 429 GA26373-PA 4..243 25..271 154 24.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14957-PA 370 GM14957-PA 1..370 19..388 1917 97 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:58:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12355-PA 135 GD12355-PA 1..112 19..127 284 47.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:58:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22093-PA 295 GE22093-PA 1..295 19..388 938 57.6 Plus
Dyak\GE22092-PA 368 GE22092-PA 1..361 19..380 646 39.2 Plus
Dyak\GE22095-PA 287 GE22095-PA 88..283 175..371 487 47.7 Plus
Dyak\GE22095-PA 287 GE22095-PA 1..105 19..120 267 48.6 Plus

MIP14129.hyp Sequence

Translation from 0 to 1166

> MIP14129.hyp
FCTSLAFGLRSRGYGVPAMRNQRTITDLPFEVLDIIFSNLRNLRDKLRLA
QVDDYLGKAFSYHSRSDYKKFSPKIHFPVRLYRVLLANCGPSIVEFTCGS
DTWSDLLAKSIAKYCPNLESVNISATLRNSHSLQFFLLNLANSLISVELK
LNDSCQSPRILNAVAELKHLKKFLYEGYIDRGVNQLCKLVDLEELQLIYQ
GRGYRCRAVNLLQICGNMTNLRRLTVSNISISQPESFHPMIWPNLKDLKM
QNCEISTVMPDCPKLKTLYIKFCKCRIKGYVCSFILKNGNNIEEIDESCE
PAPFDGQSFLQVIRSCPKLQVLSTQMGGIKIYQAFVTSVVDILKETASTR
KEPFELILYCRDKLRWFRRFLQRTSNPEVIHTLYLYKF*

MIP14129.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:51:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG44005-PB 370 CG44005-PB 1..370 19..388 1940 100 Plus
CG44005-PA 370 CG44005-PA 1..370 19..388 1940 100 Plus
CG44006-PA 374 CG44006-PA 1..372 19..388 860 47.2 Plus
CG44004-PC 368 CG44004-PC 1..365 19..385 655 39.2 Plus
CG44004-PB 368 CG44004-PB 1..365 19..385 655 39.2 Plus