Clone Sequence Records
MIP14129.complete Sequence
1424 bp assembled on 2010-02-01
GenBank Submission: BT120290.1
> MIP14129.complete
TTTTGCACCAGTCTTGCGTTTGGCCTTCGCTCTCGAGGGTATGGGGTACC
TGCAATGAGAAATCAACGGACTATAACCGATTTGCCATTCGAAGTGCTCG
ATATCATATTTAGTAACTTACGAAATCTAAGGGACAAACTTCGACTGGCG
CAGGTTGATGATTATCTGGGAAAAGCGTTTTCGTACCACAGCCGCAGTGA
TTACAAGAAGTTCTCACCAAAAATACATTTTCCCGTTCGACTTTATCGAG
TTCTGCTGGCGAATTGTGGCCCTTCCATTGTGGAATTTACCTGTGGATCG
GACACCTGGAGCGATCTGTTGGCCAAATCGATTGCGAAGTACTGTCCCAA
CCTGGAGTCGGTGAACATCAGTGCTACATTAAGAAATAGTCACAGTCTTC
AATTTTTTCTATTGAATTTGGCGAATTCTTTAATATCGGTCGAACTGAAG
CTCAACGATAGTTGCCAATCGCCGAGGATACTTAATGCCGTCGCCGAGCT
GAAACACTTGAAAAAATTCTTGTATGAAGGATACATTGACCGGGGAGTTA
ATCAGCTGTGCAAACTGGTTGATCTGGAGGAGCTGCAACTCATCTATCAA
GGTAGAGGATATAGATGCAGAGCAGTTAATCTTCTTCAAATTTGCGGAAA
TATGACAAATCTTCGGCGTTTGACTGTGAGCAATATATCGATATCTCAAC
CAGAAAGCTTCCATCCCATGATATGGCCAAACTTAAAAGATTTGAAAATG
CAAAATTGCGAAATCTCCACAGTGATGCCCGATTGTCCCAAGCTGAAAAC
CTTATATATCAAATTCTGCAAATGTAGAATCAAAGGATATGTATGCAGTT
TTATTTTGAAAAACGGCAATAATATCGAGGAAATCGATGAAAGCTGTGAA
CCGGCACCATTTGATGGCCAGAGTTTCCTTCAAGTCATTCGAAGCTGTCC
AAAATTGCAAGTGTTGTCCACTCAAATGGGGGGTATCAAGATCTACCAAG
CTTTTGTTACATCCGTAGTGGATATTCTCAAGGAGACTGCATCAACGCGA
AAAGAACCCTTCGAGCTGATATTGTACTGCCGAGACAAGCTTAGATGGTT
TCGACGATTTTTACAACGGACTTCTAATCCTGAAGTGATTCATACGCTTT
ACCTGTACAAGTTTTAAGGACTGGCAAATTGTATATCAGAAAACACAAAA
CAATTAATTATAAATATATTTTAATTTTTATTTAACCTGTATAGAACGAT
TGTACAATTTGTAAAACTTAGAAAATATTTGATTTTTATTTTTTAAATTG
TATTGAATTAGAACTGAATAACAATAATTGCATATATCTATCTAATGTTA
CTAATATAAATTTATAAATTTATTTAAACTACATTAAACTTATAATATTT
ATAAATAAAAAAAAAAAAAAAAAA
MIP14129.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:42:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34252.a | 2492 | CG34252.a | 1077..2484 | 1..1408 | 7040 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:22:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 18060340..18060904 | 1110..546 | 2825 | 100 | Minus |
chr3L | 24539361 | chr3L | 18061253..18061803 | 551..1 | 2740 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 18059980..18060275 | 1406..1111 | 1480 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:21:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18070660..18071224 | 1110..546 | 2825 | 100 | Minus |
3L | 28110227 | 3L | 18071573..18072123 | 551..1 | 2740 | 99.8 | Minus |
3L | 28110227 | 3L | 18070298..18070595 | 1408..1111 | 1490 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 18063760..18064324 | 1110..546 | 2825 | 100 | Minus |
3L | 28103327 | 3L | 18064673..18065223 | 551..1 | 2740 | 99.8 | Minus |
3L | 28103327 | 3L | 18063398..18063695 | 1408..1111 | 1490 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 10:22:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6932..7136 | 1208..1395 | 142 | 56.3 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1380..1538 | 1375..1212 | 133 | 57.2 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 1..98 | 1299..1395 | 127 | 61.6 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6919..7145 | 1162..1392 | 127 | 55.5 | Plus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 31..107 | 1317..1392 | 121 | 65.4 | Plus |
MIP14129.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:23:10 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 18060340..18060902 | 548..1110 | 100 | <- | Minus |
chr3L | 18061257..18061803 | 1..547 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-02-03 11:20:45 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34252-RA | 619..1785 | 1..1167 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:28 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34252-RA | 619..1785 | 1..1167 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:35:40 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44005-RA | 1..1113 | 55..1167 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:05:48 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44005-RA | 1..1113 | 55..1167 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:20:45 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34252-RA | 619..2024 | 1..1406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:28 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34252-RA | 619..2024 | 1..1406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:35:40 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44005-RB | 1..1406 | 1..1406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:05:48 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44005-RB | 1..1406 | 1..1406 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18070300..18070595 | 1111..1406 | 100 | <- | Minus |
3L | 18070660..18071222 | 548..1110 | 100 | <- | Minus |
3L | 18071577..18072123 | 1..547 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18070300..18070595 | 1111..1406 | 100 | <- | Minus |
3L | 18070660..18071222 | 548..1110 | 100 | <- | Minus |
3L | 18071577..18072123 | 1..547 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:23:10 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18070300..18070595 | 1111..1406 | 100 | <- | Minus |
3L | 18070660..18071222 | 548..1110 | 100 | <- | Minus |
3L | 18071577..18072123 | 1..547 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:35:40 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18063400..18063695 | 1111..1406 | 100 | <- | Minus |
arm_3L | 18063760..18064322 | 548..1110 | 100 | <- | Minus |
arm_3L | 18064677..18065223 | 1..547 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:57 Download gff for
MIP14129.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18063400..18063695 | 1111..1406 | 100 | <- | Minus |
3L | 18063760..18064322 | 548..1110 | 100 | <- | Minus |
3L | 18064677..18065223 | 1..547 | 100 | | Minus |
MIP14129.pep Sequence
Translation from 0 to 1166
> MIP14129.pep
FCTSLAFGLRSRGYGVPAMRNQRTITDLPFEVLDIIFSNLRNLRDKLRLA
QVDDYLGKAFSYHSRSDYKKFSPKIHFPVRLYRVLLANCGPSIVEFTCGS
DTWSDLLAKSIAKYCPNLESVNISATLRNSHSLQFFLLNLANSLISVELK
LNDSCQSPRILNAVAELKHLKKFLYEGYIDRGVNQLCKLVDLEELQLIYQ
GRGYRCRAVNLLQICGNMTNLRRLTVSNISISQPESFHPMIWPNLKDLKM
QNCEISTVMPDCPKLKTLYIKFCKCRIKGYVCSFILKNGNNIEEIDESCE
PAPFDGQSFLQVIRSCPKLQVLSTQMGGIKIYQAFVTSVVDILKETASTR
KEPFELILYCRDKLRWFRRFLQRTSNPEVIHTLYLYKF*
MIP14129.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:58:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF25219-PA | 388 | GF25219-PA | 1..331 | 19..368 | 391 | 28.5 | Plus |
Dana\GF23620-PA | 400 | GF23620-PA | 7..246 | 25..271 | 206 | 26.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:58:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15760-PA | 398 | GG15760-PA | 25..398 | 12..388 | 1807 | 90.7 | Plus |
Dere\GG15761-PA | 348 | GG15761-PA | 83..276 | 198..385 | 463 | 47.2 | Plus |
Dere\GG15761-PA | 348 | GG15761-PA | 1..182 | 19..184 | 327 | 42.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44005-PB | 370 | CG44005-PB | 1..370 | 19..388 | 1940 | 100 | Plus |
CG44005-PA | 370 | CG44005-PA | 1..370 | 19..388 | 1940 | 100 | Plus |
CG44006-PA | 374 | CG44006-PA | 1..372 | 19..388 | 860 | 47.2 | Plus |
CG44004-PC | 368 | CG44004-PC | 1..365 | 19..385 | 655 | 39.2 | Plus |
CG44004-PB | 368 | CG44004-PB | 1..365 | 19..385 | 655 | 39.2 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL22727-PA | 638 | GL22727-PA | 1..382 | 16..384 | 500 | 31.1 | Plus |
Dper\GL22727-PA | 638 | GL22727-PA | 445..528 | 287..370 | 176 | 36.9 | Plus |
Dper\GL21697-PA | 428 | GL21697-PA | 4..243 | 25..271 | 166 | 25.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA23397-PA | 383 | GA23397-PA | 1..375 | 16..380 | 517 | 31.1 | Plus |
Dpse\GA26373-PA | 429 | GA26373-PA | 4..243 | 25..271 | 154 | 24.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:58:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14957-PA | 370 | GM14957-PA | 1..370 | 19..388 | 1917 | 97 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:58:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD12355-PA | 135 | GD12355-PA | 1..112 | 19..127 | 284 | 47.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:58:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE22093-PA | 295 | GE22093-PA | 1..295 | 19..388 | 938 | 57.6 | Plus |
Dyak\GE22092-PA | 368 | GE22092-PA | 1..361 | 19..380 | 646 | 39.2 | Plus |
Dyak\GE22095-PA | 287 | GE22095-PA | 88..283 | 175..371 | 487 | 47.7 | Plus |
Dyak\GE22095-PA | 287 | GE22095-PA | 1..105 | 19..120 | 267 | 48.6 | Plus |
MIP14129.hyp Sequence
Translation from 0 to 1166
> MIP14129.hyp
FCTSLAFGLRSRGYGVPAMRNQRTITDLPFEVLDIIFSNLRNLRDKLRLA
QVDDYLGKAFSYHSRSDYKKFSPKIHFPVRLYRVLLANCGPSIVEFTCGS
DTWSDLLAKSIAKYCPNLESVNISATLRNSHSLQFFLLNLANSLISVELK
LNDSCQSPRILNAVAELKHLKKFLYEGYIDRGVNQLCKLVDLEELQLIYQ
GRGYRCRAVNLLQICGNMTNLRRLTVSNISISQPESFHPMIWPNLKDLKM
QNCEISTVMPDCPKLKTLYIKFCKCRIKGYVCSFILKNGNNIEEIDESCE
PAPFDGQSFLQVIRSCPKLQVLSTQMGGIKIYQAFVTSVVDILKETASTR
KEPFELILYCRDKLRWFRRFLQRTSNPEVIHTLYLYKF*
MIP14129.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:51:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44005-PB | 370 | CG44005-PB | 1..370 | 19..388 | 1940 | 100 | Plus |
CG44005-PA | 370 | CG44005-PA | 1..370 | 19..388 | 1940 | 100 | Plus |
CG44006-PA | 374 | CG44006-PA | 1..372 | 19..388 | 860 | 47.2 | Plus |
CG44004-PC | 368 | CG44004-PC | 1..365 | 19..385 | 655 | 39.2 | Plus |
CG44004-PB | 368 | CG44004-PB | 1..365 | 19..385 | 655 | 39.2 | Plus |