MIP14133.complete Sequence
1298 bp assembled on 2009-11-04
GenBank Submission: BT100260.1
> MIP14133.complete
GCTGTTCAAAATATCGTGTCTCCTCATTCTTTTGGTCTTCTGTCTGCAGC
AGAGTTATTCGATCAAACGCAGATGCCTTCAGCCACTGGATGTGGGCAAA
GGCAAGGCCTATCTGCGCAATTGGTTCTACAACTCCACATCGCAGAGGTG
CCAAAGGTTCATCTTCTATGGAGGCGCGAGCAATGGCAACAACTTCAATA
CCCAAGCTCGATGTCACAAAATTTGCCTAGCCCAAGTCTCTTTGCCAATT
AATTTCAACTCCACTGCCGCTTAAAAAGAACAACGATTCGAATCAAACAA
TAACTAATAAATGAGACTTAAATACGTTAAGGCCAGTCGAGCTAATTGCA
TTTTGTGTGAAATCGCTGAGAAAATCAAGTTGATGCTGCGCCCATATTCG
CTGGCAAGAAATATTTCCTATAATTTAAGCTCATACTATTATATATTTAT
TCTTGTTTTTTTTTTCTTTGTAAAACTTGTCAGCGCCACCCACTTTCTAG
GCAGCGCCGGCTAGTTCCACAGTGGGTGTCTATTTGCCCAGGAGGTGTTA
GGCGGGTGCGCTGACAACCCAATGGAGCTGCAGCAACAATTGCAGCCACA
TTGCAGCCACAACAACAATTGCAACAGCAGCACCATCAACGTTTTGCTAA
ATCAAAATTGACACTATGCAAAAAGCCAACCCACAGATCGGCAATTGCTG
GAGGAAAACGGTAGCCGCACACACATAGCCACACCGTGGAGCACATGCCT
CTGGGCCAAGACTTGGGGCCAGGCGCTCAGCATGCCAAGCCATGGAGGCC
AAAAGGTGCCCGCTGTCCGTGGCGCCAAGATGTGGCCGCTGTTGTTGCTA
TTGCCACTCGGCGTTAGATTTCAACCATGTGCAGACAACGGTCGCCACAC
ACAAACGTTGAAAATAGCAGTTATTAGTTTGACACAGCGCACAGTGTGCT
AAATGTGATTACAAAAGAGAATTAAAGTAATCAGGAAGGTGATAAAATTA
AGATTTTCATTAACGAGAAAGTGATCAAAAAGATGACACTATCAAAAAGG
TACACACTCAGTTAATAACAGTCGTTAAAAGATGTCTATTGCATTTATTT
AAATTTCACACTCCGCGCAGTTCCTAGTTTAATTGAATATTTTTATGTTA
ATTAAACATTTTGCCCACTGTGCCGAGGCAGTCATGCCATGTTCGAGTGC
ACTGTGGGCACCACGATGGCGACATTTGCTCATTAAGCATATTAAATAAT
TAGTACTTGTTGTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP14133.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:42:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34276-RA | 579 | CG34276-RA | 162..579 | 1..418 | 2090 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:44:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 11750962..11752160 | 63..1267 | 5820 | 99.3 | Plus |
chr3R | 27901430 | chr3R | 11750830..11750891 | 1..62 | 310 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:44:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15926373..15927578 | 63..1268 | 6030 | 100 | Plus |
3R | 32079331 | 3R | 15926241..15926302 | 1..62 | 310 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 15667204..15668409 | 63..1268 | 6030 | 100 | Plus |
3R | 31820162 | 3R | 15667072..15667133 | 1..62 | 310 | 100 | Plus |
Blast to na_te.dros performed 2019-03-15 18:44:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6751..6824 | 564..640 | 161 | 71.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1066..1130 | 574..640 | 159 | 73.1 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6011..6105 | 559..647 | 155 | 67.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1090..1151 | 574..640 | 152 | 74.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6860 | 576..640 | 149 | 72.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2357..2424 | 574..640 | 148 | 70.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6830..6893 | 575..640 | 145 | 71.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2750..2823 | 564..640 | 143 | 68.8 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 7466..7560 | 559..647 | 137 | 65.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2382 | 581..640 | 133 | 71.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6791 | 576..640 | 133 | 72.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6753..6812 | 576..640 | 133 | 72.3 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1080..1142 | 576..640 | 131 | 69.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2296..2361 | 570..640 | 127 | 69 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1528..1587 | 576..634 | 126 | 70 | Plus |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5306..5372 | 482..419 | 120 | 68.7 | Minus |
MIP14133.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:41 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 11750830..11750891 | 1..62 | 100 | -> | Plus |
chr3R | 11750962..11751471 | 63..578 | 98 | == | Plus |
chr3R | 11751551..11752160 | 658..1267 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 14:31:00 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 3..276 | 1..274 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:45 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 3..276 | 1..274 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:51 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 3..276 | 1..274 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 3..276 | 1..274 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 14:30:59 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 137..425 | 1..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:45 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RA | 137..425 | 1..289 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:51 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RB | 553..1819 | 1..1267 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34276-RB | 553..1819 | 1..1267 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15926241..15926302 | 1..62 | 100 | -> | Plus |
3R | 15926373..15927577 | 63..1267 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15926241..15926302 | 1..62 | 100 | -> | Plus |
3R | 15926373..15927577 | 63..1267 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15926241..15926302 | 1..62 | 100 | -> | Plus |
3R | 15926373..15927577 | 63..1267 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:51 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11751963..11752024 | 1..62 | 100 | -> | Plus |
arm_3R | 11752095..11753299 | 63..1267 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:07:09 Download gff for
MIP14133.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15667204..15668408 | 63..1267 | 100 | | Plus |
3R | 15667072..15667133 | 1..62 | 100 | -> | Plus |
MIP14133.hyp Sequence
Translation from 0 to 273
> MIP14133.hyp
LFKISCLLILLVFCLQQSYSIKRRCLQPLDVGKGKAYLRNWFYNSTSQRC
QRFIFYGGASNGNNFNTQARCHKICLAQVSLPINFNSTAA*
MIP14133.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34276-PB | 91 | CG34276-PB | 2..91 | 1..90 | 482 | 100 | Plus |
CG34276-PA | 91 | CG34276-PA | 2..91 | 1..90 | 482 | 100 | Plus |
MIP14133.pep Sequence
Translation from 1 to 273
> MIP14133.pep
LFKISCLLILLVFCLQQSYSIKRRCLQPLDVGKGKAYLRNWFYNSTSQRC
QRFIFYGGASNGNNFNTQARCHKICLAQVSLPINFNSTAA*
MIP14133.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34276-PB | 91 | CG34276-PB | 2..91 | 1..90 | 482 | 100 | Plus |
CG34276-PA | 91 | CG34276-PA | 2..91 | 1..90 | 482 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:54:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL22079-PA | 53 | GL22079-PA | 2..53 | 1..50 | 140 | 55.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:54:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA27371-PA | 93 | GA27371-PA | 2..86 | 1..83 | 270 | 60 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:54:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM24269-PA | 91 | GM24269-PA | 2..91 | 1..90 | 423 | 90 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:54:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD19057-PA | 91 | GD19057-PA | 20..91 | 19..90 | 350 | 91.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:54:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE24350-PA | 78 | GE24350-PA | 2..78 | 1..77 | 328 | 83.1 | Plus |