Clone MIP14133 Report

Search the DGRC for MIP14133

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:141
Well:33
Vector:pOT2|pOTB7_DraIII
Protein status:MIP14133.pep: Imported from assembly
Sequenced Size:1298

Clone Sequence Records

MIP14133.complete Sequence

1298 bp assembled on 2009-11-04

GenBank Submission: BT100260.1

> MIP14133.complete
GCTGTTCAAAATATCGTGTCTCCTCATTCTTTTGGTCTTCTGTCTGCAGC
AGAGTTATTCGATCAAACGCAGATGCCTTCAGCCACTGGATGTGGGCAAA
GGCAAGGCCTATCTGCGCAATTGGTTCTACAACTCCACATCGCAGAGGTG
CCAAAGGTTCATCTTCTATGGAGGCGCGAGCAATGGCAACAACTTCAATA
CCCAAGCTCGATGTCACAAAATTTGCCTAGCCCAAGTCTCTTTGCCAATT
AATTTCAACTCCACTGCCGCTTAAAAAGAACAACGATTCGAATCAAACAA
TAACTAATAAATGAGACTTAAATACGTTAAGGCCAGTCGAGCTAATTGCA
TTTTGTGTGAAATCGCTGAGAAAATCAAGTTGATGCTGCGCCCATATTCG
CTGGCAAGAAATATTTCCTATAATTTAAGCTCATACTATTATATATTTAT
TCTTGTTTTTTTTTTCTTTGTAAAACTTGTCAGCGCCACCCACTTTCTAG
GCAGCGCCGGCTAGTTCCACAGTGGGTGTCTATTTGCCCAGGAGGTGTTA
GGCGGGTGCGCTGACAACCCAATGGAGCTGCAGCAACAATTGCAGCCACA
TTGCAGCCACAACAACAATTGCAACAGCAGCACCATCAACGTTTTGCTAA
ATCAAAATTGACACTATGCAAAAAGCCAACCCACAGATCGGCAATTGCTG
GAGGAAAACGGTAGCCGCACACACATAGCCACACCGTGGAGCACATGCCT
CTGGGCCAAGACTTGGGGCCAGGCGCTCAGCATGCCAAGCCATGGAGGCC
AAAAGGTGCCCGCTGTCCGTGGCGCCAAGATGTGGCCGCTGTTGTTGCTA
TTGCCACTCGGCGTTAGATTTCAACCATGTGCAGACAACGGTCGCCACAC
ACAAACGTTGAAAATAGCAGTTATTAGTTTGACACAGCGCACAGTGTGCT
AAATGTGATTACAAAAGAGAATTAAAGTAATCAGGAAGGTGATAAAATTA
AGATTTTCATTAACGAGAAAGTGATCAAAAAGATGACACTATCAAAAAGG
TACACACTCAGTTAATAACAGTCGTTAAAAGATGTCTATTGCATTTATTT
AAATTTCACACTCCGCGCAGTTCCTAGTTTAATTGAATATTTTTATGTTA
ATTAAACATTTTGCCCACTGTGCCGAGGCAGTCATGCCATGTTCGAGTGC
ACTGTGGGCACCACGATGGCGACATTTGCTCATTAAGCATATTAAATAAT
TAGTACTTGTTGTTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP14133.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:42:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG34276-RA 579 CG34276-RA 162..579 1..418 2090 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:44:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 11750962..11752160 63..1267 5820 99.3 Plus
chr3R 27901430 chr3R 11750830..11750891 1..62 310 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:44:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15926373..15927578 63..1268 6030 100 Plus
3R 32079331 3R 15926241..15926302 1..62 310 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 15667204..15668409 63..1268 6030 100 Plus
3R 31820162 3R 15667072..15667133 1..62 310 100 Plus
Blast to na_te.dros performed 2019-03-15 18:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6751..6824 564..640 161 71.4 Plus
roo 9092 roo DM_ROO 9092bp 1066..1130 574..640 159 73.1 Plus
Dyak\TART 8444 Dyak\TART TARTYAK 8444bp 6011..6105 559..647 155 67.7 Plus
roo 9092 roo DM_ROO 9092bp 1090..1151 574..640 152 74.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6798..6860 576..640 149 72.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2357..2424 574..640 148 70.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6830..6893 575..640 145 71.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2750..2823 564..640 143 68.8 Plus
TART-C 11124 TART-C TARTC 11124bp 7466..7560 559..647 137 65.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2382 581..640 133 71.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6791 576..640 133 72.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6812 576..640 133 72.3 Plus
roo 9092 roo DM_ROO 9092bp 1080..1142 576..640 131 69.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2296..2361 570..640 127 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1528..1587 576..634 126 70 Plus
gypsy5 7369 gypsy5 GYPSY5 7369bp 5306..5372 482..419 120 68.7 Minus

MIP14133.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:45:41 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 11750830..11750891 1..62 100 -> Plus
chr3R 11750962..11751471 63..578 98 == Plus
chr3R 11751551..11752160 658..1267 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-11-04 14:31:00 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 3..276 1..274 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:45 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 3..276 1..274 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:28:51 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 3..276 1..274 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 3..276 1..274 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-11-04 14:30:59 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 137..425 1..289 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:45 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RA 137..425 1..289 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:28:51 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RB 553..1819 1..1267 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:58:26 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
CG34276-RB 553..1819 1..1267 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15926241..15926302 1..62 100 -> Plus
3R 15926373..15927577 63..1267 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15926241..15926302 1..62 100 -> Plus
3R 15926373..15927577 63..1267 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:45:41 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15926241..15926302 1..62 100 -> Plus
3R 15926373..15927577 63..1267 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:28:51 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11751963..11752024 1..62 100 -> Plus
arm_3R 11752095..11753299 63..1267 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:07:09 Download gff for MIP14133.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15667204..15668408 63..1267 100   Plus
3R 15667072..15667133 1..62 100 -> Plus

MIP14133.hyp Sequence

Translation from 0 to 273

> MIP14133.hyp
LFKISCLLILLVFCLQQSYSIKRRCLQPLDVGKGKAYLRNWFYNSTSQRC
QRFIFYGGASNGNNFNTQARCHKICLAQVSLPINFNSTAA*

MIP14133.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG34276-PB 91 CG34276-PB 2..91 1..90 482 100 Plus
CG34276-PA 91 CG34276-PA 2..91 1..90 482 100 Plus

MIP14133.pep Sequence

Translation from 1 to 273

> MIP14133.pep
LFKISCLLILLVFCLQQSYSIKRRCLQPLDVGKGKAYLRNWFYNSTSQRC
QRFIFYGGASNGNNFNTQARCHKICLAQVSLPINFNSTAA*

MIP14133.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG34276-PB 91 CG34276-PB 2..91 1..90 482 100 Plus
CG34276-PA 91 CG34276-PA 2..91 1..90 482 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22079-PA 53 GL22079-PA 2..53 1..50 140 55.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27371-PA 93 GA27371-PA 2..86 1..83 270 60 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24269-PA 91 GM24269-PA 2..91 1..90 423 90 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:54:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19057-PA 91 GD19057-PA 20..91 19..90 350 91.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:54:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24350-PA 78 GE24350-PA 2..78 1..77 328 83.1 Plus