Clone MIP14241 Report

Search the DGRC for MIP14241

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:142
Well:41
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG34436-RA
Protein status:MIP14241.pep: gold
Sequenced Size:937

Clone Sequence Records

MIP14241.complete Sequence

937 bp assembled on 2011-05-03

GenBank Submission: BT126408.1

> MIP14241.complete
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTGGAATAATGAATTTCGCATCTTGTCTTGCTGTGT
TATCATGGATGCTGGCTAATCAGGGATCGGCACAGCTTCTTGACCAGAAC
TGTGCCGAAGTTTCACGTCTTTCTAATGATATAATATTTAGTAGACCGTG
GATGGCACTGGTCTTATTGCCCAATAAAACCTGCAGTGGCGCCCTGATTC
ACAAATACTTTGTGATAACATCAGCAAGCTGTGTTTTCAATCAAGAGAGA
GCCATCGTCCGCTTGGGGCAGTTGAGCATTAAACAAGAGCATATTGTTAG
TTATAGCAGTGATGATTACCATGTGCAAAGTGCCTACATTCATAGGTTCT
ATGAGAAAAGCAATTTCGAGCATGACATAGCTTTGCTGGAACTTCAGAAC
GATGTGCTCTACAAGGCCCACATACGTCCAATTTGCCTTTGGTTAGACAA
ATCTGATATCGACACACAAATGTTTAAAAGATATGAAACATTCCGCTGGG
GCATAGATGAGAAGTACATATTGCCTGCGGCCAAGACAAGCAAAATAAAA
CACATCAGCCAAGTCAAGTGCGAAAATGCCTTCAAATTGTATCCGCAGAA
TTCGCATATCTGTGCTGGCTATAAGAACAAAAGCAAGTGCGTGGAAACAG
GAAGTCCCTTGTTTAAAAAGATACGCTATTACACAAAAATTCGTTACACT
CTATTCGGAATTCAGAGTTATGGCGAATCGAGGACGTGTTTATATACCGA
TGTGACGAAATACATTGACTGGATTATGGGAGTCATTCAAAATGTTAATG
TGATAGTGTCGAATGGGGAAAATAGCTACGCTTAAGATTCTTTAATAAAC
TGATTCAAAATGCAATGACAAAAAAAAAAAAAAAAAA

MIP14241.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:36:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 24105866..24106482 303..919 3040 99.5 Plus
chr3R 27901430 chr3R 24105514..24105703 67..256 920 98.9 Plus
chr3R 27901430 chr3R 24105764..24105809 257..302 230 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:36:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 28282932..28283549 303..920 3090 100 Plus
3R 32079331 3R 28282580..28282769 67..256 950 100 Plus
3R 32079331 3R 28282830..28282875 257..302 230 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:32
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 28023763..28024380 303..920 3090 100 Plus
3R 31820162 3R 28023411..28023600 67..256 950 100 Plus
3R 31820162 3R 28023661..28023706 257..302 230 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:36:10 has no hits.

MIP14241.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:12 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 24105508..24105703 60..256 97 -> Plus
chr3R 24105764..24105809 257..302 100 -> Plus
chr3R 24105866..24106482 303..919 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-05-03 14:29:37 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..813 73..885 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:21:11 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..813 73..885 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:07:52 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..813 73..885 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-05-03 14:29:36 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..819 67..885 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:21:11 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..853 67..919 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:52 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
CG34436-RA 1..853 67..919 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:12 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28282574..28282769 60..256 98 -> Plus
3R 28282830..28282875 257..302 100 -> Plus
3R 28282932..28283548 303..919 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:12 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28282574..28282769 60..256 98 -> Plus
3R 28282830..28282875 257..302 100 -> Plus
3R 28282932..28283548 303..919 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:12 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28282574..28282769 60..256 98 -> Plus
3R 28282830..28282875 257..302 100 -> Plus
3R 28282932..28283548 303..919 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:21:11 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 24108296..24108491 60..256 98 -> Plus
arm_3R 24108552..24108597 257..302 100 -> Plus
arm_3R 24108654..24109270 303..919 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:06:49 Download gff for MIP14241.complete
Subject Subject Range Query Range Percent Splice Strand
3R 28023405..28023600 60..256 98 -> Plus
3R 28023661..28023706 257..302 100 -> Plus
3R 28023763..28024379 303..919 100   Plus

MIP14241.pep Sequence

Translation from 0 to 884

> MIP14241.pep
LSLSLSLSLSLSLSLSLSLSLSGIMNFASCLAVLSWMLANQGSAQLLDQN
CAEVSRLSNDIIFSRPWMALVLLPNKTCSGALIHKYFVITSASCVFNQER
AIVRLGQLSIKQEHIVSYSSDDYHVQSAYIHRFYEKSNFEHDIALLELQN
DVLYKAHIRPICLWLDKSDIDTQMFKRYETFRWGIDEKYILPAAKTSKIK
HISQVKCENAFKLYPQNSHICAGYKNKSKCVETGSPLFKKIRYYTKIRYT
LFGIQSYGESRTCLYTDVTKYIDWIMGVIQNVNVIVSNGENSYA*

MIP14241.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23282-PA 376 GF23282-PA 134..376 64..280 235 28.2 Plus
Dana\GF11497-PA 284 GF11497-PA 7..268 30..275 233 28.9 Plus
Dana\GF12720-PA 554 GF12720-PA 297..552 50..283 231 27.9 Plus
Dana\GF11318-PA 308 GF11318-PA 12..219 78..284 228 29.3 Plus
Dana\GF12631-PA 271 GF12631-PA 33..268 64..279 218 31.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24239-PA 298 GG24239-PA 22..267 42..279 268 31 Plus
Dere\GG18032-PA 282 GG18032-PA 18..279 39..281 267 29.7 Plus
Dere\GG20771-PA 275 GG20771-PA 15..274 40..281 260 29 Plus
Dere\GG20543-PA 280 GG20543-PA 49..276 61..280 259 29.2 Plus
Dere\GG16934-PA 251 GG16934-PA 10..247 31..280 249 28.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20292-PA 242 GH20292-PA 1..235 63..275 268 31.5 Plus
Dgri\GH23917-PA 235 GH23917-PA 5..228 57..275 259 31.8 Plus
Dgri\GH20291-PA 237 GH20291-PA 1..230 68..275 238 31.5 Plus
Dgri\GH20262-PA 564 GH20262-PA 298..560 40..281 227 27.8 Plus
Dgri\GH20624-PA 374 GH20624-PA 125..364 64..275 217 29.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:12:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG34436-PA 270 CG34436-PA 1..270 25..294 1429 100 Plus
CG34437-PA 266 CG34437-PA 1..259 25..292 535 42.9 Plus
CG33465-PC 488 CG33465-PC 7..267 31..281 318 33.5 Plus
CG30087-PA 277 CG30087-PA 49..270 61..275 297 32.3 Plus
CG30187-PE 489 CG30187-PE 8..269 31..284 284 31.4 Plus
CG30187-PF 500 CG30187-PF 8..269 31..284 284 31.4 Plus
CG30091-PA 526 CG30091-PA 6..284 31..286 284 30 Plus
CG30083-PB 279 CG30083-PB 18..264 44..284 274 28.3 Plus
CG30090-PA 291 CG30090-PA 6..278 28..280 272 30.3 Plus
CG43335-PA 281 CG43335-PA 6..276 27..279 270 28.3 Plus
CG43742-PB 474 CG43742-PB 7..257 31..279 256 30 Plus
CG43125-PA 258 CG43125-PA 7..251 31..287 255 29.8 Plus
CG30286-PB 277 CG30286-PB 18..277 43..284 255 28 Plus
CG10764-PA 523 CG10764-PA 51..264 67..279 254 28.6 Plus
CG30082-PB 280 CR30082-PB 21..274 44..278 253 30.4 Plus
CG18420-PA 299 CG18420-PA 5..272 24..283 247 29.9 Plus
CG33461-PB 287 CG33461-PB 24..282 43..279 243 27.6 Plus
CG43110-PA 483 CG43110-PA 61..260 78..281 241 31.9 Plus
CG43110-PB 483 CG43110-PB 61..260 78..281 241 31.9 Plus
CG33462-PA 300 CG33462-PA 3..274 26..280 237 28.1 Plus
CG30283-PB 273 CG30283-PB 13..273 31..285 236 29.3 Plus
CG4650-PB 299 CG4650-PB 8..271 31..292 232 28.2 Plus
CG30287-PA 284 CG30287-PA 20..277 41..275 227 30.2 Plus
CG33459-PA 284 CG33459-PA 1..272 25..275 222 30.8 Plus
CG33226-PC 292 CG33226-PC 31..288 46..281 221 29.2 Plus
CG8172-PD 371 CG8172-PD 71..370 7..283 219 27.8 Plus
CG43336-PA 279 CG43336-PA 11..274 36..278 216 26.7 Plus
CG33225-PB 292 CG33225-PB 18..282 39..283 216 29.9 Plus
CG33225-PC 307 CG33225-PC 33..297 39..283 216 29.9 Plus
CG8172-PE 545 CG8172-PE 290..544 51..283 214 28.4 Plus
CG8172-PF 561 CG8172-PF 306..560 51..283 214 28.4 Plus
CG30098-PA 264 CG30098-PA 16..255 38..275 211 27.8 Plus
CG43124-PA 245 CG43124-PA 1..236 25..284 210 27 Plus
CG30288-PC 282 CG30288-PC 53..276 64..281 210 31.4 Plus
CG5909-PA 381 CG5909-PA 142..381 66..280 210 25.8 Plus
CG30289-PA 316 CG30289-PA 3..271 24..275 209 26.4 Plus
CG9372-PA 408 CG9372-PA 186..403 66..276 208 27.7 Plus
CG14227-PB 286 CG14227-PB 19..285 39..283 207 29.7 Plus
CG30088-PB 281 CG30088-PB 1..278 15..281 203 25.1 Plus
CG33458-PA 281 CG33458-PA 20..271 42..275 203 26.8 Plus
CG1773-PA 317 CG1773-PA 40..302 45..276 203 26.4 Plus
CG18636-PA 349 CG18636-PA 4..281 20..278 203 27.6 Plus
CG30414-PC 305 CG30414-PC 10..296 31..281 196 25.8 Plus
CG30414-PB 305 CG30414-PB 10..296 31..281 196 25.8 Plus
CG30002-PB 311 CG30002-PB 70..302 62..276 190 27.6 Plus
CG14088-PB 289 CG14088-PB 5..256 25..283 185 27.1 Plus
grass-PA 335 CG5896-PA 87..334 64..289 184 27.1 Plus
CG9294-PB 352 CG9294-PB 113..334 66..275 184 28.3 Plus
grass-PB 377 CG5896-PB 129..376 64..289 184 27.1 Plus
CG10232-PD 509 CG10232-PD 269..503 66..275 181 27.1 Plus
CG11670-PD 404 CG11670-PD 173..393 78..279 177 29.1 Plus
CG30091-PA 526 CG30091-PA 291..520 46..275 164 28.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19431-PA 551 GI19431-PA 285..549 40..283 225 27.9 Plus
Dmoj\GI22268-PA 380 GI22268-PA 150..379 63..282 217 28.4 Plus
Dmoj\GI23202-PA 376 GI23202-PA 107..371 48..279 208 27.8 Plus
Dmoj\GI16575-PA 596 GI16575-PA 365..574 78..275 191 29.8 Plus
Dmoj\GI11319-PA 240 GI11319-PA 2..238 66..281 185 25.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11858-PA 345 GL11858-PA 6..283 28..280 330 32.3 Plus
Dper\GL11857-PA 283 GL11857-PA 8..277 31..280 322 32.5 Plus
Dper\GL17488-PA 282 GL17488-PA 20..279 41..281 322 31.1 Plus
Dper\GL11321-PA 284 GL11321-PA 17..283 41..285 285 31.4 Plus
Dper\GL16656-PA 282 GL16656-PA 18..281 42..285 281 31.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24176-PA 282 GA24176-PA 20..279 41..281 324 32 Plus
Dpse\GA25145-PA 345 GA25145-PA 6..283 28..280 323 31.9 Plus
Dpse\GA15642-PA 283 GA15642-PA 8..277 31..280 322 32.5 Plus
Dpse\GA24468-PA 278 GA24468-PA 5..274 31..280 286 30.1 Plus
Dpse\GA24685-PA 284 GA24685-PA 1..283 25..285 285 30.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16374-PA 304 GM16374-PA 4..80 211..287 334 77.9 Plus
Dsec\GM16374-PA 304 GM16374-PA 102..250 125..279 306 40.6 Plus
Dsec\GM20123-PA 263 GM20123-PA 2..248 44..284 294 30.2 Plus
Dsec\GM21633-PA 279 GM21633-PA 49..270 61..275 285 30.4 Plus
Dsec\GM21631-PA 291 GM21631-PA 15..278 37..280 278 32 Plus
Dsec\GM15715-PA 277 GM15715-PA 11..272 34..279 277 30.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21367-PA 377 GD21367-PA 135..329 98..292 795 71.8 Plus
Dsim\GD19032-PA 401 GD19032-PA 100..396 7..279 291 29.6 Plus
Dsim\GD25600-PA 263 GD25600-PA 2..248 44..284 289 29.7 Plus
Dsim\GD11268-PA 509 GD11268-PA 51..261 67..276 281 30.4 Plus
Dsim\GD11133-PA 295 GD11133-PA 15..278 37..280 280 32.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21214-PA 280 GJ21214-PA 38..273 62..275 306 34.2 Plus
Dvir\GJ21212-PA 268 GJ21212-PA 26..261 62..275 274 33.3 Plus
Dvir\GJ21978-PA 296 GJ21978-PA 55..292 64..279 245 29.4 Plus
Dvir\GJ21185-PA 560 GJ21185-PA 294..558 40..283 227 27.6 Plus
Dvir\GJ22863-PA 372 GJ22863-PA 103..363 26..275 214 28.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17814-PA 616 GK17814-PA 359..614 50..283 233 27.9 Plus
Dwil\GK23933-PA 280 GK23933-PA 15..250 62..272 231 32.5 Plus
Dwil\GK11885-PA 388 GK11885-PA 110..383 35..275 203 25.9 Plus
Dwil\GK19259-PA 386 GK19259-PA 164..381 66..276 190 27.8 Plus
Dwil\GK12860-PA 601 GK12860-PA 388..596 78..275 189 29.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:50:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24321-PA 309 GE24321-PA 38..300 31..275 297 30.4 Plus
Dyak\GE11663-PA 516 GE11663-PA 51..265 67..279 288 32.3 Plus
Dyak\GE11725-PA 296 GE11725-PA 5..275 27..280 281 28.5 Plus
Dyak\GE11723-PA 522 GE11723-PA 2..260 40..275 278 31.4 Plus
Dyak\GE11729-PA 289 GE11729-PA 1..285 13..280 264 28.8 Plus
Dyak\GE11723-PA 522 GE11723-PA 278..506 46..275 155 29.4 Plus

MIP14241.hyp Sequence

Translation from 60 to 884

> MIP14241.hyp
SVGIMNFASCLAVLSWMLANQGSAQLLDQNCAEVSRLSNDIIFSRPWMAL
VLLPNKTCSGALIHKYFVITSASCVFNQERAIVRLGQLSIKQEHIVSYSS
DDYHVQSAYIHRFYEKSNFEHDIALLELQNDVLYKAHIRPICLWLDKSDI
DTQMFKRYETFRWGIDEKYILPAAKTSKIKHISQVKCENAFKLYPQNSHI
CAGYKNKSKCVETGSPLFKKIRYYTKIRYTLFGIQSYGESRTCLYTDVTK
YIDWIMGVIQNVNVIVSNGENSYA*

MIP14241.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG34436-PA 270 CG34436-PA 1..270 5..274 1429 100 Plus
CG34437-PA 266 CG34437-PA 1..259 5..272 535 42.9 Plus
CG33465-PC 488 CG33465-PC 7..267 11..261 318 33.5 Plus
CG30087-PA 277 CG30087-PA 49..270 41..255 297 32.3 Plus
CG30091-PA 526 CG30091-PA 6..284 11..266 284 30 Plus