Clone Sequence Records
MIP14266.complete Sequence
1411 bp assembled on 2009-10-08
GenBank Submission: BT099986.1
> MIP14266.complete
TATCAGACTAGTGACTGTCGAATCGTGGAGACTCAAAGAAGAAAATGAAA
TCCCAGTACACCCGAAAAGCCAAACCAGAGCCAGCAAAAACACCTACAGC
ACTAGAGCCCAAGACTAATACTAAACTGGCGGGTCCAAAATCGAGATCCA
CGACGGTGGTGGTGAAGCGCCGGAATCGCCGAAATTCCATTGATGGAGCA
GCAGGAGGCTCCACTAGCGGCAATTCCGAGGGGGGTAATTCCAGAGCAGC
TTTCTCCGGAAGTGGTTATTCGGCAGGAAATAATTCCGAAGGAGGTACAT
CGACTGGACGCAAGTCCATTGGTAGTAAATCCAGAGGAACTTATTTCCGA
GCAAGTTATACCGGTGCTGGTAGTTCCGGATCTGAGAATAGGTCGCCGCC
CCAGCTTGTTCCGGTGCGGCGTAAGCCCCTCAGTGATTACATGATGCTGG
AGGAACAGCCATCTACCTCCAGTCGTCCAACCACATCCTCTTCCTATTTA
TCGGACCAGGATCGTCCGATGAGTTATGCCGCTGCGGTGGAATCACTCCC
CATATCTAGGCTCAAGGTCAAGGTGGTGCTATCCCCACGTCTCAAGCGGT
CCGGCAATCAGCCGCCGATCAAGCGGCCGAACCGTAAAAATTCACCCAAC
GCCAAGGTCAAATCGATCCCACCGACGCAGTCTAAGACACACAATATCCA
GCTAAATCCGAAGCGCAATATGGCCCAGGTCCCGCCCCAATCCCGCGATG
CCACCGTGAGTAACAAGTCGAATAACTTAGCGCCACCTGGCGGAAACAAA
AAGAAACCCAAGTCGAAGAAATCCCAAAAGCTAAAGCAAAATCAACCACG
ATCAGAAGCTACTTCTCCGGAGCAGCCAGCCTCACCAAAGTCTTTATCAC
CTTGTGATAATCAAAGTTCTCCGCCGAAGTTCTCCGATTCCAACGCCTAT
CTGGACCATCACCATGAGAAAATGCAGCGCTTTCTGGCTGAGCAAACGGC
TGGTCAAAAGCCGTATCCCAACCGTGGCCAAGTGAAGACCTGCAAACAAA
ATGTCCAGCTGCCAACCAATCGATCCCTCTTCGACTTCGATGAGCGACTA
TTCAGACGCGGGGATCTCGAGTCGGCCGCATTTTTGGCCCAGAACCAGGC
CATGATACGCATGTGGCTGAACCCTAATATGCTGATCTCCTAGGCAGCTC
AATCAATTAACAATCAAAAATTGATCATTTAGTTTTATATGTGTTTGAAC
TTGTTATGTTGCATCAAAATTCTAATTCAAATCTTATGAGCAATCTCTGT
GGCACGTAGACTTACGACCTAAACTATGGAAGCCCCTGGAGATTGAACTG
TATTTTGAATATACATTGGCAAATAAAAAAGTTATTTGATTTCAAAAAAA
AAAAAAAAAAA
MIP14266.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:53:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9692-RB | 1464 | CG9692-RB | 66..1460 | 1..1395 | 6975 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:01:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 16694837..16696155 | 75..1393 | 6580 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 16694700..16694773 | 1..74 | 370 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16705110..16706430 | 75..1395 | 6605 | 100 | Plus |
3L | 28110227 | 3L | 16704973..16705046 | 1..74 | 370 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 16698210..16699530 | 75..1395 | 6605 | 100 | Plus |
3L | 28103327 | 3L | 16698073..16698146 | 1..74 | 370 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 02:01:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib1 | 2167 | transib1 TRANSIB1 2167bp | 650..691 | 1342..1384 | 122 | 79.1 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3760..3831 | 1274..1199 | 117 | 67.1 | Minus |
MIP14266.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:02:08 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 16694700..16694773 | 1..74 | 100 | -> | Plus |
chr3L | 16694837..16696155 | 75..1393 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:07 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1149 | 45..1193 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:52 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1149 | 45..1193 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:13:57 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1149 | 45..1193 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:55:27 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1149 | 45..1193 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-08 17:22:06 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1349 | 45..1393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:52 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1349 | 45..1393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:13:57 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1393 | 1..1393 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:55:27 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9692-RB | 1..1393 | 1..1393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:02:08 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16704973..16705046 | 1..74 | 100 | -> | Plus |
3L | 16705110..16706428 | 75..1393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:02:08 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16704973..16705046 | 1..74 | 100 | -> | Plus |
3L | 16705110..16706428 | 75..1393 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:02:08 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16704973..16705046 | 1..74 | 100 | -> | Plus |
3L | 16705110..16706428 | 75..1393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:13:57 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16698073..16698146 | 1..74 | 100 | -> | Plus |
arm_3L | 16698210..16699528 | 75..1393 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:23:22 Download gff for
MIP14266.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16698210..16699528 | 75..1393 | 100 | | Plus |
3L | 16698073..16698146 | 1..74 | 100 | -> | Plus |
MIP14266.hyp Sequence
Translation from 44 to 1192
> MIP14266.hyp
MKSQYTRKAKPEPAKTPTALEPKTNTKLAGPKSRSTTVVVKRRNRRNSID
GAAGGSTSGNSEGGNSRAAFSGSGYSAGNNSEGGTSTGRKSIGSKSRGTY
FRASYTGAGSSGSENRSPPQLVPVRRKPLSDYMMLEEQPSTSSRPTTSSS
YLSDQDRPMSYAAAVESLPISRLKVKVVLSPRLKRSGNQPPIKRPNRKNS
PNAKVKSIPPTQSKTHNIQLNPKRNMAQVPPQSRDATVSNKSNNLAPPGG
NKKKPKSKKSQKLKQNQPRSEATSPEQPASPKSLSPCDNQSSPPKFSDSN
AYLDHHHEKMQRFLAEQTAGQKPYPNRGQVKTCKQNVQLPTNRSLFDFDE
RLFRRGDLESAAFLAQNQAMIRMWLNPNMLIS*
MIP14266.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:50:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9692-PB | 382 | CG9692-PB | 1..382 | 1..382 | 1973 | 100 | Plus |
CG9692-PC | 250 | CG9692-PC | 1..250 | 133..382 | 1299 | 100 | Plus |
MIP14266.pep Sequence
Translation from 44 to 1192
> MIP14266.pep
MKSQYTRKAKPEPAKTPTALEPKTNTKLAGPKSRSTTVVVKRRNRRNSID
GAAGGSTSGNSEGGNSRAAFSGSGYSAGNNSEGGTSTGRKSIGSKSRGTY
FRASYTGAGSSGSENRSPPQLVPVRRKPLSDYMMLEEQPSTSSRPTTSSS
YLSDQDRPMSYAAAVESLPISRLKVKVVLSPRLKRSGNQPPIKRPNRKNS
PNAKVKSIPPTQSKTHNIQLNPKRNMAQVPPQSRDATVSNKSNNLAPPGG
NKKKPKSKKSQKLKQNQPRSEATSPEQPASPKSLSPCDNQSSPPKFSDSN
AYLDHHHEKMQRFLAEQTAGQKPYPNRGQVKTCKQNVQLPTNRSLFDFDE
RLFRRGDLESAAFLAQNQAMIRMWLNPNMLIS*
MIP14266.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:31:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11772-PA | 286 | GF11772-PA | 16..286 | 159..382 | 274 | 33.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:31:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG13571-PA | 386 | GG13571-PA | 1..386 | 1..382 | 1369 | 76.2 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:31:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH21556-PA | 318 | GH21556-PA | 55..318 | 116..382 | 152 | 26.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9692-PB | 382 | CG9692-PB | 1..382 | 1..382 | 1973 | 100 | Plus |
CG9692-PC | 250 | CG9692-PC | 1..250 | 133..382 | 1299 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM25650-PA | 384 | GM25650-PA | 1..384 | 1..382 | 1629 | 90.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:31:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD14654-PA | 386 | GD14654-PA | 1..386 | 1..382 | 1611 | 88.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:31:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE19868-PA | 385 | GE19868-PA | 1..385 | 1..382 | 1280 | 74.3 | Plus |