Clone Sequence Records
MIP14282.complete Sequence
656 bp assembled on 2009-09-28
GenBank Submission: BT099873.1
> MIP14282.complete
ACTAAGTTTACATAAGTCACTAATATGCATAATTTTCAACTGACCGTCGT
TTTCCTGGCACTGTTCACTTTTACCAGTTCCTTTGGATACCGTTCTGAAC
ATCCGCACAGAAAACCAATACATAGCAACCGTCCATCTCCAACTACTACA
ATGACAACAGATTCAACTTCAACTAGCTTTATGACAACAGATTCAACCCC
AAGTGAAACGGAATCCACTTCGGATACATCTACTGAAGAAAGTACACAGA
TTTCTGACTTCACCGAAAGTTCAACCGAAAGTTCGACGACAGCAAAGATA
TTTTTAAAGGACAATGAGATTTCAAAACCAGAAAACAGCAACACTTTACT
TATCAGTGTGTATGGCATTGTAATTACCTTGGCTATTTTAGTTGCTCTAA
TATACTGCATTCGACGCCATTATGGTTCATATTCTGTGAAAGAGCAATGC
AAGCCCATTGAAAGTACCGCATATTTTAATAATATTAAATATTAAAATCA
TATTTAAATAATATTATCTAAAAACAAGGATTTAAATAATAACTTTCTTA
AAAACAAATTTGCATCCACTAAGTATTAAAATAATTTTTGGCACGAATCT
TAAAATATTTGAAATAAACATGACTCATTTATTTCCGACAAAAAAAAAAA
AAAAAA
MIP14282.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:50:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-RB | 819 | He-RB | 179..819 | 1..641 | 3205 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:58:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 13970846..13971361 | 639..124 | 2580 | 100 | Minus |
chr2L | 23010047 | chr2L | 13971541..13971663 | 123..1 | 615 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:58:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13972094..13972611 | 641..124 | 2590 | 100 | Minus |
2L | 23513712 | 2L | 13972791..13972913 | 123..1 | 615 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:46:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13972094..13972611 | 641..124 | 2590 | 100 | Minus |
2L | 23513712 | 2L | 13972791..13972913 | 123..1 | 615 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 01:58:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
S-element | 1736 | S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). | 1446..1657 | 614..405 | 108 | 52.6 | Minus |
MIP14282.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:00:02 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 13971541..13971663 | 1..123 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:55:47 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 1..471 | 25..495 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:33:56 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 1..471 | 25..495 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:12:47 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 1..471 | 25..495 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:53:24 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 1..471 | 25..495 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 11:27:53 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 35..673 | 1..639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:33:56 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 35..673 | 1..639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:12:47 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 35..673 | 1..639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:53:24 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 35..673 | 1..639 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:02 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13972096..13972611 | 124..639 | 100 | <- | Minus |
2L | 13972791..13972913 | 1..123 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:02 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13972096..13972611 | 124..639 | 100 | <- | Minus |
2L | 13972791..13972913 | 1..123 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:00:02 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13972096..13972611 | 124..639 | 100 | <- | Minus |
2L | 13972791..13972913 | 1..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:12:47 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13972096..13972611 | 124..639 | 100 | <- | Minus |
arm_2L | 13972791..13972913 | 1..123 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:04 Download gff for
MIP14282.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13972096..13972611 | 124..639 | 100 | <- | Minus |
2L | 13972791..13972913 | 1..123 | 100 | | Minus |
MIP14282.hyp Sequence
Translation from 24 to 494
> MIP14282.hyp
MHNFQLTVVFLALFTFTSSFGYRSEHPHRKPIHSNRPSPTTTMTTDSTST
SFMTTDSTPSETESTSDTSTEESTQISDFTESSTESSTTAKIFLKDNEIS
KPENSNTLLISVYGIVITLAILVALIYCIRRHYGSYSVKEQCKPIESTAY
FNNIKY*
MIP14282.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:18:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-PC | 156 | CG31770-PC | 1..156 | 1..156 | 798 | 100 | Plus |
He-PB | 156 | CG31770-PB | 1..156 | 1..156 | 798 | 100 | Plus |
MIP14282.pep Sequence
Translation from 24 to 494
> MIP14282.pep
MHNFQLTVVFLALFTFTSSFGYRSEHPHRKPIHSNRPSPTTTMTTDSTST
SFMTTDSTPSETESTSDTSTEESTQISDFTESSTESSTTAKIFLKDNEIS
KPENSNTLLISVYGIVITLAILVALIYCIRRHYGSYSVKEQCKPIESTAY
FNNIKY*
MIP14282.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-PC | 156 | CG31770-PC | 1..156 | 1..156 | 798 | 100 | Plus |
He-PB | 156 | CG31770-PB | 1..156 | 1..156 | 798 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19546-PA | 159 | GM19546-PA | 1..157 | 1..154 | 332 | 70.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:52:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22024-PA | 159 | GD22024-PA | 1..157 | 1..154 | 332 | 70.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:52:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25225-PA | 165 | GE25225-PA | 1..160 | 1..156 | 203 | 45.6 | Plus |