Clone MIP14304 Report

Search the DGRC for MIP14304

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:143
Well:4
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14440-RA
Protein status:MIP14304.pep: gold
Sequenced Size:1820

Clone Sequence Records

MIP14304.complete Sequence

1820 bp assembled on 2009-12-11

GenBank Submission: BT120023.1

> MIP14304.complete
CTTCCGCGAAATTATTGAAAGCTATTTTTAAAGCTATTTTGGACCAGCTC
TGCAGCTTTTTTCCATATTGATTAGTTATGTCGCTTTTGTTGTTTACTCG
CCACATTTTTTTTGCCCAGGCCAGTTAATTGTGTTAATTCCCGGCGCGCG
GGAAAAGAAAAAGAAAAGTAACGAACGACGGTGGAACCACGGAAGGACAT
AACTTCCGTCAAAAAATAACCATCACAAGCACCACCAACCGGATCCCAAA
GGCGAGTCGCGAGCGAGCGCACAAATCCCCCGATGTCAGCGGGTGTGGGT
GGCGGAGGGAGCATTACCACCGAGCACCACAGTCGCCTCTACTTCCTCAA
CTCGCCGACGGCGCCGCTCACCGCCCGCGATCCGTTCTTCATCAAGCCGG
AGTATCTCAGCTATGAGAGTCCCATGCACCATGCCCTCTACTCGGGCAAT
CGGGGCCTCTTAGAGTACAACAACTATACCAGTTCGGCGGCCGCGGCGGC
AGCCGTTGCCTCATCCGTAGCCACCTCCGTATCTGTGTCCGGTTCGGGTT
CGGGATCAGGATCCGCGGGAACCGCAGCCAGTGCCTCAGCAAGTGCAGCG
AACAGCGGTGGCAGTGCGTCTGGAACGGCGGTGCTGAGCCTCGAGAACAA
TTTCGCACAGCAGGGTAATCCCCACCAGCAGCAGCAGCAGCAGCAACAGC
AGGGCAATCCCCACCAGGAGGTACTCCAGCAGCAGCAGCAGCAGCACCCC
CTGCATCATCATTTGTCCGCTGGCGTTGTGGTCGAGGCCAGTCAACTTGG
TGGCGTTCCGGGTCTTGCCAATCTTGGCGTGCCACATCTCAGCGCCCAGC
AGTCAGTGACGCAGCAGGGCCAATCCTCGAGAGCGCAAAAGGCCGCCCGC
CGGAGAAGCAACGAATCGATTGAGGCCAGGGAAAGGCGGCTGGAGAGAAA
CGCCGCCCGGATGCGGGACAAACGGGCCAAGGAATCGGAGGCCGAGTACC
GCGTGCGTTTGGCCAAGAATGCGGAGGCGAATCGAGTGCGACGCCAGAAC
GAAACGGAAGTACAAAGAACCCTAAGACTGATGAAGAATGCAGCGCGGCA
GCGACTGCGCCGCGCCTCGGAAACCGTCGAGGAGCGTAAGAAGCGGCTGG
CCAAGGCCGCCGAACGGATGCGAATCGCCCGGGCCAGTGCGCCCAAGGTC
ATCAAGCCGCCGCTGGCCGACAGGCTAAAGGGTTACTAATGGAGGATCGT
ATAATCGGTTAGCCTGGATTCAGGCAAATACGCCCATTTGGAGCTGGCTC
TCCGGCAGAGCAGCTTGGCCGAGCAGCCCTAAAAGCTGGCCAGGATCGGC
AGAGGAACACAGACACATCTACAAATTATATATATATATAAACATATATA
TATATTGTATACAGCCTATAAGAAAAAAGTTTGAGATAAGGAAACCAGTC
CGAAACCAGAAGGATTCTTGAGGACTTGCAAATGAATGGGCAGCAGGCAC
TCTAGGATTAAAGCCAGGCAATTTTTTTTTTTAAGTTAAAAATTAACAAG
ATGAAGTAACGTAATGTAATCATAAAGTAAAGTATTTTTATAATGCATGC
ATTATATTCGTACGATATGTATACACACACGACACAAAAACCAATCACAC
ACACACAGACACACACACACCCCCAACCCCCACACACACATGCACTAGCA
TAGTCATTGCCACACATATAGAGCCCCCAAAAAAGGGCAGTAATATCCCC
CACTCCCCCAGGAAAAAGGAAGCTTACAGCGCCAGGGTGCCTCACTGTAA
ATAAAAAAAAAAAAAAAAAA

MIP14304.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:46:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14440-RA 1801 CG14440-RA 1..1754 65..1818 8770 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:37:51
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6589460..6590708 1249..1 6215 99.8 Minus
chrX 22417052 chrX 6588945..6589459 1802..1286 2505 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:37:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6696750..6698567 1818..1 9090 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:44:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 6704848..6706665 1818..1 9090 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:37:50 has no hits.

MIP14304.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:38:35 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6588950..6589051 1696..1797 100 == Minus
chrX 6589101..6589453 1292..1644 91 == Minus
chrX 6589454..6590708 1..1258 95   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-12-11 16:48:26 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..957 283..1239 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:27:48 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..957 283..1239 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:58:45 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..957 283..1239 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:26:10 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..957 283..1239 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-11 16:48:25 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..1738 65..1802 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:27:48 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RA 1..1738 65..1802 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:58:45 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RB 1..1802 1..1802 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:26:10 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
CG14440-RB 1..1802 1..1802 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:35 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
X 6696766..6698567 1..1802 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:35 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
X 6696766..6698567 1..1802 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:38:35 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
X 6696766..6698567 1..1802 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:58:45 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6590799..6592600 1..1802 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:13:56 Download gff for MIP14304.complete
Subject Subject Range Query Range Percent Splice Strand
X 6704864..6706665 1..1802 100   Minus

MIP14304.hyp Sequence

Translation from 282 to 1238

> MIP14304.hyp
MSAGVGGGGSITTEHHSRLYFLNSPTAPLTARDPFFIKPEYLSYESPMHH
ALYSGNRGLLEYNNYTSSAAAAAAVASSVATSVSVSGSGSGSGSAGTAAS
ASASAANSGGSASGTAVLSLENNFAQQGNPHQQQQQQQQQGNPHQEVLQQ
QQQQHPLHHHLSAGVVVEASQLGGVPGLANLGVPHLSAQQSVTQQGQSSR
AQKAARRRSNESIEARERRLERNAARMRDKRAKESEAEYRVRLAKNAEAN
RVRRQNETEVQRTLRLMKNAARQRLRRASETVEERKKRLAKAAERMRIAR
ASAPKVIKPPLADRLKGY*

MIP14304.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:15:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14440-PB 318 CG14440-PB 1..318 1..318 1582 100 Plus
CG14440-PA 318 CG14440-PA 1..318 1..318 1582 100 Plus
CG14442-PD 529 CG14442-PD 51..240 118..302 391 49 Plus
CG14442-PB 952 CG14442-PB 51..240 118..302 391 49 Plus
CG14442-PE 958 CG14442-PE 51..240 118..302 391 49 Plus

MIP14304.pep Sequence

Translation from 282 to 1238

> MIP14304.pep
MSAGVGGGGSITTEHHSRLYFLNSPTAPLTARDPFFIKPEYLSYESPMHH
ALYSGNRGLLEYNNYTSSAAAAAAVASSVATSVSVSGSGSGSGSAGTAAS
ASASAANSGGSASGTAVLSLENNFAQQGNPHQQQQQQQQQGNPHQEVLQQ
QQQQHPLHHHLSAGVVVEASQLGGVPGLANLGVPHLSAQQSVTQQGQSSR
AQKAARRRSNESIEARERRLERNAARMRDKRAKESEAEYRVRLAKNAEAN
RVRRQNETEVQRTLRLMKNAARQRLRRASETVEERKKRLAKAAERMRIAR
ASAPKVIKPPLADRLKGY*

MIP14304.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20844-PA 365 GF20844-PA 215..365 171..318 635 88.2 Plus
Dana\GF20845-PA 1057 GF20845-PA 153..264 191..302 271 59.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:10:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17662-PA 265 GG17662-PA 1..265 48..318 1293 96.3 Plus
Dere\GG17663-PA 1030 GG17663-PA 154..248 208..302 265 67.4 Plus
Dere\GG17663-PA 1030 GG17663-PA 199..283 207..291 167 55.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:10:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24235-PA 327 GH24235-PA 206..327 197..318 543 90.2 Plus
Dgri\GH24236-PA 1042 GH24236-PA 169..263 208..302 258 66.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG14440-PB 318 CG14440-PB 1..318 1..318 1582 100 Plus
CG14440-PA 318 CG14440-PA 1..318 1..318 1582 100 Plus
CG14442-PD 529 CG14442-PD 51..240 118..302 391 49 Plus
CG14442-PB 952 CG14442-PB 51..240 118..302 391 49 Plus
CG14442-PE 958 CG14442-PE 51..240 118..302 391 49 Plus
CG14442-PC 1008 CG14442-PC 51..240 118..302 391 49 Plus
CG14442-PA 1034 CG14442-PA 51..240 118..302 391 49 Plus
SoxN-PB 761 CG18024-PB 626..761 54..181 160 30.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:10:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21429-PA 346 GI21429-PA 225..346 197..318 556 92.6 Plus
Dmoj\GI21431-PA 1084 GI21431-PA 160..254 208..302 262 67.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:10:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13366-PA 317 GL13366-PA 1..317 1..318 937 71.8 Plus
Dper\GL13367-PA 1050 GL13367-PA 157..253 206..302 263 66 Plus
Dper\GL13367-PA 1050 GL13367-PA 203..304 206..308 153 45.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:11:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12988-PA 317 GA12988-PA 1..317 1..318 953 70.1 Plus
Dpse\GA22844-PA 1048 GA22844-PA 155..251 206..302 263 66 Plus
Dpse\GA22844-PA 1048 GA22844-PA 201..302 206..308 153 45.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:11:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12556-PA 316 GM12556-PA 1..316 1..318 1608 99.1 Plus
Dsec\GM12557-PA 1033 GM12557-PA 156..252 206..302 249 66 Plus
Dsec\GM12557-PA 1033 GM12557-PA 202..287 206..291 168 54.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:11:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24584-PA 317 GD24584-PA 1..317 1..318 1613 99.4 Plus
Dsim\GD24585-PA 691 GD24585-PA 166..260 208..302 243 67.4 Plus
Dsim\GD24585-PA 691 GD24585-PA 211..295 207..291 161 55.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:11:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16448-PA 334 GJ16448-PA 195..334 157..318 574 75.3 Plus
Dvir\GJ16449-PA 1102 GJ16449-PA 165..259 208..302 264 68.4 Plus
Dvir\GJ16990-PA 52 GJ16990-PA 1..52 267..318 225 86.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:11:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25001-PA 304 GK25001-PA 1..304 1..318 877 67.3 Plus
Dwil\GK25002-PA 356 GK25002-PA 161..255 208..302 246 67.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16451-PA 315 GE16451-PA 1..315 1..318 1551 96.2 Plus
Dyak\GE16452-PA 1043 GE16452-PA 158..252 208..302 265 67.4 Plus