Clone MIP14339 Report

Search the DGRC for MIP14339

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:143
Well:39
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG34427-RB
Protein status:MIP14339.pep: gold
Sequenced Size:884

Clone Sequence Records

MIP14339.complete Sequence

884 bp assembled on 2010-01-04

GenBank Submission: BT120084.1

> MIP14339.complete
CAGTTCGGAAGTCCAAAAATGACCCAAAGGATTGAAAATGTAGTGAAAGG
ACTAGTGATGGTGGTTCTGGCTTTTATGGTGGCACAAACGGTGTCCGATT
GCAATGTCTGTCAATCAAATCAAGTGGCCTGCATCAACTCCACGTCCTTT
TACTTGTGTTTTGGAGATGGAACTCCACATCGTGATCAGCTATACCATTG
CTTAGAAGGATTTGACTGCACCAATCTCACGGCGATTTGTGTTCAGAAGA
GCAGCCAGCGGCCTCCCAGTTGCGGGGATACCTCTCAATGTGGCCAATGT
AGTGCCAATCGGAATTATCTATTCGCGTGCCAGAGTCGTGGTATCTTTCA
GATGTGCTATGGAGCCACTAGACCCACTGGGCAATTTGGTTACTGCCCCA
CGGGTACGGTTTGTGATGCCAGCAGCACTGCGATTTGTGTGCCTGAGGTC
GCGGGTCAAACGCTGACCTGTGACATAAATGACGAACTGGTGGACACCAC
CACTGCAGCGTCCGTGACCACCGAAACTACTGGCGGTACCACTGAAAGTA
GCACTGAGAGCACAACTGAAAGCAGCACCGATTCAACTGTAACCACCGAG
ACGCCCACTACAGTGACGCCTCTAACTCCTGCCCAGATGTGTGCCCAAAG
GAATGCCACTGGTCTTTTTCCCGTCATTCCTGCGGATCCCTATTGCCAGC
GCTACATTAGTTGTTACTTTCAAAAGAACGTTCTTATCAAATCTGCCGAA
TATAACTGTCCCACAGATTCCTGGTTTGTTGCTCAAACTCAGAGTTGCGT
CTACGTAAATCCCGGCTACTGTCTTTAATGTTCAGCTCATTATAAATAAA
CCGTCAAATACTCTTTGCAAAAAAAAAAAAAAAA

MIP14339.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:44:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG34427.a 878 CG34427.a 20..878 1..859 4295 100 Plus
CG34427-RA 909 CG34427-RA 113..909 60..856 3985 100 Plus
CG34427-RA 909 CG34427-RA 1..57 6..62 285 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:29:20
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8796986..8797522 165..701 2580 98.7 Plus
chr3L 24539361 chr3L 8797588..8797755 701..868 795 98.2 Plus
chr3L 24539361 chr3L 8796823..8796927 62..166 510 99 Plus
chr3L 24539361 chr3L 8796704..8796765 1..62 310 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:16:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:29:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8805043..8805579 165..701 2685 100 Plus
3L 28110227 3L 8805645..8805813 701..869 845 100 Plus
3L 28110227 3L 8804878..8804984 60..166 535 100 Plus
3L 28110227 3L 8804761..8804822 1..62 310 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:41:29
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8798143..8798679 165..701 2685 100 Plus
3L 28103327 3L 8798745..8798913 701..869 845 100 Plus
3L 28103327 3L 8797978..8798084 60..166 535 100 Plus
3L 28103327 3L 8797861..8797922 1..62 310 100 Plus
Blast to na_te.dros performed on 2019-03-16 17:29:18 has no hits.

MIP14339.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:30:13 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8796704..8796763 1..60 100 -> Plus
chr3L 8796822..8796927 61..166 98 -> Plus
chr3L 8796988..8797522 167..701 98 -> Plus
chr3L 8797589..8797755 702..868 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-04 10:47:32 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RA 1..753 76..828 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:21:44 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..810 19..828 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:34:22 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..810 19..828 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:59:56 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..810 19..828 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-04 10:47:32 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RA 5..777 53..828 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:21:44 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..825 4..828 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:34:22 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..865 4..868 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:59:56 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
CG34427-RB 1..865 4..868 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:30:13 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8804761..8804820 1..60 100 -> Plus
3L 8804879..8804984 61..166 100 -> Plus
3L 8805045..8805579 167..701 100 -> Plus
3L 8805646..8805812 702..868 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:30:13 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8804761..8804820 1..60 100 -> Plus
3L 8804879..8804984 61..166 100 -> Plus
3L 8805045..8805579 167..701 100 -> Plus
3L 8805646..8805812 702..868 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:30:13 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8804761..8804820 1..60 100 -> Plus
3L 8804879..8804984 61..166 100 -> Plus
3L 8805045..8805579 167..701 100 -> Plus
3L 8805646..8805812 702..868 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:34:22 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8797861..8797920 1..60 100 -> Plus
arm_3L 8797979..8798084 61..166 100 -> Plus
arm_3L 8798145..8798679 167..701 100 -> Plus
arm_3L 8798746..8798912 702..868 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:09:50 Download gff for MIP14339.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8798145..8798679 167..701 100 -> Plus
3L 8798746..8798912 702..868 100   Plus
3L 8797861..8797920 1..60 100 -> Plus
3L 8797979..8798084 61..166 100 -> Plus

MIP14339.hyp Sequence

Translation from 0 to 827

> MIP14339.hyp
QFGSPKMTQRIENVVKGLVMVVLAFMVAQTVSDCNVCQSNQVACINSTSF
YLCFGDGTPHRDQLYHCLEGFDCTNLTAICVQKSSQRPPSCGDTSQCGQC
SANRNYLFACQSRGIFQMCYGATRPTGQFGYCPTGTVCDASSTAICVPEV
AGQTLTCDINDELVDTTTAASVTTETTGGTTESSTESTTESSTDSTVTTE
TPTTVTPLTPAQMCAQRNATGLFPVIPADPYCQRYISCYFQKNVLIKSAE
YNCPTDSWFVAQTQSCVYVNPGYCL*

MIP14339.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:47:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG34427-PB 269 CG34427-PB 1..269 7..275 1460 100 Plus
CG14958-PA 145 CG14958-PA 6..145 17..160 359 46.5 Plus
CG34426-PA 296 CG34426-PA 1..289 18..273 252 30.2 Plus
CG13312-PA 342 CG13312-PA 14..244 18..274 216 26.5 Plus
CG13308-PB 233 CG13308-PB 12..221 21..274 212 28.5 Plus

MIP14339.pep Sequence

Translation from 0 to 827

> MIP14339.pep
QFGSPKMTQRIENVVKGLVMVVLAFMVAQTVSDCNVCQSNQVACINSTSF
YLCFGDGTPHRDQLYHCLEGFDCTNLTAICVQKSSQRPPSCGDTSQCGQC
SANRNYLFACQSRGIFQMCYGATRPTGQFGYCPTGTVCDASSTAICVPEV
AGQTLTCDINDELVDTTTAASVTTETTGGTTESSTESTTESSTDSTVTTE
TPTTVTPLTPAQMCAQRNATGLFPVIPADPYCQRYISCYFQKNVLIKSAE
YNCPTDSWFVAQTQSCVYVNPGYCL*

MIP14339.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24357-PA 272 GF24357-PA 1..272 7..275 1004 72.8 Plus
Dana\GF10121-PA 147 GF10121-PA 1..147 11..160 309 41.3 Plus
Dana\GF24358-PA 233 GF24358-PA 16..213 25..266 163 29.1 Plus
Dana\GF20111-PA 145 GF20111-PA 3..124 20..146 158 34.6 Plus
Dana\GF10145-PA 151 GF10145-PA 6..148 14..158 145 34.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14349-PA 505 GG14349-PA 261..505 54..275 910 80 Plus
Dere\GG15111-PA 148 GG15111-PA 16..148 25..160 310 47.1 Plus
Dere\GG15057-PA 154 GG15057-PA 6..154 14..163 169 36.8 Plus
Dere\GG14351-PA 230 GG14351-PA 9..218 21..274 164 27.3 Plus
Dere\GG15056-PA 158 GG15056-PA 13..151 20..158 157 35 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15329-PA 430 GH15329-PA 240..404 55..234 453 52.2 Plus
Dgri\GH10924-PA 155 GH10924-PA 7..148 19..160 309 43.4 Plus
Dgri\GH16137-PA 150 GH16137-PA 2..141 18..158 162 34 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:21:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG34427-PB 269 CG34427-PB 1..269 7..275 1460 100 Plus
CG14958-PA 145 CG14958-PA 6..145 17..160 359 46.5 Plus
CG34426-PA 296 CG34426-PA 1..289 18..273 252 30.2 Plus
CG13312-PA 342 CG13312-PA 14..244 18..274 216 26.5 Plus
CG13308-PB 233 CG13308-PB 12..221 21..274 212 28.5 Plus
CG13309-PA 229 CG13309-PA 4..214 19..274 208 25.6 Plus
CG13311-PA 153 CG13311-PA 6..153 14..163 195 32.9 Plus
CG32023-PA 160 CG32023-PA 13..140 20..149 194 36.6 Plus
CG42525-PB 377 CG42525-PB 220..377 134..274 153 31.9 Plus
CG42525-PA 419 CG42525-PA 262..419 134..274 153 31.9 Plus
CG32024-PA 209 CG32024-PA 21..208 95..274 147 25 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:18:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12931-PA 304 GI12931-PA 40..300 26..274 628 52.2 Plus
Dmoj\GI13368-PA 149 GI13368-PA 10..149 19..160 310 45.5 Plus
Dmoj\GI12405-PA 343 GI12405-PA 12..245 20..274 186 30.5 Plus
Dmoj\GI12406-PA 156 GI12406-PA 7..137 18..147 154 32.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10343-PA 228 GL10343-PA 1..226 7..237 759 67.1 Plus
Dper\GL24894-PA 143 GL24894-PA 13..142 32..164 303 47.4 Plus
Dper\GL10345-PA 237 GL10345-PA 12..222 21..274 183 27 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28198-PA 466 GA28198-PA 256..464 21..237 739 69.1 Plus
Dpse\GA13383-PA 150 GA13383-PA 20..149 32..164 302 47.4 Plus
Dpse\GA12188-PA 237 GA12188-PA 12..222 21..274 178 27 Plus
Dpse\GA12192-PA 156 GA12192-PA 12..142 19..149 157 35.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25094-PA 245 GM25094-PA 1..245 26..275 1078 87.6 Plus
Dsec\GM14547-PA 145 GM14547-PA 4..145 15..160 314 45.9 Plus
Dsec\GM24913-PA 168 GM24913-PA 13..138 20..147 163 36.6 Plus
Dsec\GM25097-PA 229 GM25097-PA 4..124 19..146 157 33.3 Plus
Dsec\GM24914-PA 153 GM24914-PA 27..148 34..158 153 36.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:18:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14128-PA 473 GD14128-PA 267..473 69..275 831 94.2 Plus
Dsim\GD13738-PA 145 GD13738-PA 4..145 15..160 317 45.9 Plus
Dsim\GD12960-PA 160 GD12960-PA 13..138 20..147 163 37.4 Plus
Dsim\GD14131-PA 229 GD14131-PA 4..124 19..146 158 33.3 Plus
Dsim\GD12961-PA 153 GD12961-PA 27..148 34..158 153 36.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:18:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13074-PA 420 GJ13074-PA 236..411 38..237 459 48 Plus
Dvir\GJ12008-PA 149 GJ12008-PA 10..149 19..160 311 44.8 Plus
Dvir\GJ13819-PA 251 GJ13819-PA 8..249 18..274 149 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:18:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16739-PA 488 GK16739-PA 275..488 57..275 631 58.4 Plus
Dwil\GK13204-PA 148 GK13204-PA 1..148 11..160 312 44.4 Plus
Dwil\GK17468-PA 151 GK17468-PA 6..147 14..158 191 34.9 Plus
Dwil\GK16739-PA 488 GK16739-PA 33..260 34..253 152 32.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20782-PA 266 GE20782-PA 1..266 7..275 1162 91.8 Plus
Dyak\GE21338-PA 148 GE21338-PA 23..147 32..159 290 46.9 Plus
Dyak\GE21280-PA 160 GE21280-PA 4..138 8..147 168 36.2 Plus
Dyak\GE20784-PA 232 GE20784-PA 12..220 21..274 164 27.3 Plus
Dyak\GE21281-PA 154 GE21281-PA 27..149 34..158 151 38.8 Plus