MIP14517.complete Sequence
317 bp assembled on 2009-09-28
GenBank Submission: BT099870.1
> MIP14517.complete
AATATATCTAAAATGCGTTTATATAAAATATTTTGCCTAATTTGTTCCAT
ATTTGGCTGTGTTTCAGCTTTAAAAGATCCGAGCTGTGCTGTTGAGTTGT
TTGGCCAAGGTGCTTGCAACACTTTGATTACTCGAATCGGCTATTTACGT
TGGGAAAACATGTGTACATCAAAGAACTTTGTTGCATGCGACACCGATGG
AACTTCATTTGAGAGCATTAAGGAATGCGAAGATAAATGCAAAGAGTAGT
CTTATGGCTGTAAAATAAAAAAACAATATTAAATATTTCAAAAAGTCACA
AAAAAAAAAAAAAAAAA
MIP14517.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:50:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-RA | 376 | Sfp23F-RA | 71..370 | 1..300 | 1500 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:10:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 3386994..3387213 | 299..80 | 1100 | 100 | Minus |
chr2L | 23010047 | chr2L | 3387282..3387360 | 79..1 | 365 | 97.5 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:17:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3387353..3387573 | 300..80 | 1105 | 100 | Minus |
2L | 23513712 | 2L | 3387642..3387720 | 79..1 | 395 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:47:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3387353..3387573 | 300..80 | 1105 | 100 | Minus |
2L | 23513712 | 2L | 3387642..3387720 | 79..1 | 395 | 100 | Minus |
2L | 23513712 | 2L | 3388336..3388371 | 75..40 | 135 | 91.6 | Minus |
Blast to na_te.dros performed 2019-03-16 07:10:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cr1a | 4470 | Cr1a DMCR1A 4470bp | 4309..4362 | 287..230 | 110 | 69 | Minus |
MIP14517.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:11:10 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 3387282..3387360 | 1..79 | 97 | | Minus |
chr2L | 3387036..3387213 | 80..257 | 100 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:55:44 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 1..237 | 13..249 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:34:33 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 1..237 | 13..249 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:35:07 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 1..237 | 13..249 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:27:16 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 1..237 | 13..249 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-09-28 11:18:45 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 24..284 | 1..261 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:34:33 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 24..284 | 1..261 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:35:07 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 24..322 | 1..299 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:27:16 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 24..322 | 1..299 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:10 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387354..3387573 | 80..299 | 100 | <- | Minus |
2L | 3387642..3387720 | 1..79 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:10 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387354..3387573 | 80..299 | 100 | <- | Minus |
2L | 3387642..3387720 | 1..79 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:11:10 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387354..3387573 | 80..299 | 100 | <- | Minus |
2L | 3387642..3387720 | 1..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:35:07 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3387354..3387573 | 80..299 | 100 | <- | Minus |
arm_2L | 3387642..3387720 | 1..79 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:18:29 Download gff for
MIP14517.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387354..3387573 | 80..299 | 100 | <- | Minus |
2L | 3387642..3387720 | 1..79 | 100 | | Minus |
MIP14517.hyp Sequence
Translation from 0 to 248
> MIP14517.hyp
NISKMRLYKIFCLICSIFGCVSALKDPSCAVELFGQGACNTLITRIGYLR
WENMCTSKNFVACDTDGTSFESIKECEDKCKE*
MIP14517.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:22:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-PA | 78 | CG42459-PA | 1..78 | 5..82 | 430 | 100 | Plus |
CG42460-PB | 79 | CG42460-PB | 1..78 | 5..82 | 212 | 52.6 | Plus |
CG42460-PA | 79 | CG42460-PA | 1..78 | 5..82 | 212 | 52.6 | Plus |
MIP14517.pep Sequence
Translation from 0 to 248
> MIP14517.pep
NISKMRLYKIFCLICSIFGCVSALKDPSCAVELFGQGACNTLITRIGYLR
WENMCTSKNFVACDTDGTSFESIKECEDKCKE*
MIP14517.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-PA | 78 | CG42459-PA | 1..78 | 5..82 | 430 | 100 | Plus |
CG42460-PB | 79 | CG42460-PB | 1..78 | 5..82 | 212 | 52.6 | Plus |
CG42460-PA | 79 | CG42460-PA | 1..78 | 5..82 | 212 | 52.6 | Plus |