Clone MIP14788 Report

Search the DGRC for MIP14788

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:147
Well:88
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG31752-RB
Protein status:MIP14788.pep: gold
Sequenced Size:1585

Clone Sequence Records

MIP14788.complete Sequence

1585 bp assembled on 2009-10-12

GenBank Submission: BT100017.1

> MIP14788.complete
TACGCCTGATCAATCTACTCTAATCTTAGACTATGGAGAAAAAAAACAAA
TGTTGTAAGCACTTTAAGGACCATGGGGCGCAGAAACCATCACAACTCAA
TGAGCACAAGGAGCATAAATTAAGGGACCATTACCGCAAGGAACGAATGA
AGTCTTCAGAGAATGTGCAAAAGTCCTACAAACATAATTATACGACAAAT
CAAAATCAGATACGGCAGGACTATTATTGCGATCATTCGTGGGAGGATCG
TGAGTCTCCTTCTAACCATGAAGACCATGCTCAGTATTTGTTTTCCAAAA
AATGTTTCAATGTTAATTATCACCCGGCACAAAATGAGAAGTGGAAACAC
CAGTCGAAATTAAAGGTGATGATGCAACCCAGTTCAAATTACACACCCAA
GCAAGCAATTGTTCCAGCATATCTCCTTAATGATAGAAAAAGGCAGAAAC
CAGTCATAGAACACAGCTGTGGGGACTACCTTCTCTATAAGAATCAAAAC
TATGAAGCGGACCCATCTAGTAAAAGTGAGCAGTGTGAGGTCGAGGGTGG
TTATAATAACATAACCCCACATCGTTTAAACCACCACCAGAAGCAAAAGA
AAGACTCTGATTTACTTAATGCAGCTAAGGCTCATTGCCAGGCTGCTGCC
GAAAGATTCCAGAATAAGTTTCCTTCATGCAGTAAGTGTTCCTCCTCCAA
CGAATCCCAATCGAAACCATCCAGAATAACCGTGATCAGTGCGAAAAGCG
GAGACGATCTCAGAGCGGCTGTTCGGTCCCAAATAGAGGTCCAAGAGGCC
TTGAATGCGTTTACACTTGAAGTGAAGGATAAGAGGGAGGAAGTACCATC
CGAAGAAGAACGCAGTACCAAGCCCAAAAAGAGCAAACAAATTACGTCTC
ATACGCAAGCCGAGAAAGTGGATCCCACTGCCGAATGCGCCCAATTAGAT
ACCCTAGGGGTTGACGATTTAGAACTCGTGGATCTAAGTGGCAGTCCTAG
TGATGCCGCTATTACCAATGTGGATGTAAGTGACAGTCCTGGTGATGCAG
CTATTACCAAAATGGATCTAAGAGACAGTCCTACTGATGCAGATATTAAC
AAAGTAATTGATCCGGTTATCAGGAACATTCAGCGCATGTATCTGAACAC
TCTGAAAGACGAAATGTCCCTCATGGAGTATCTAGTTACGGTCCCGGAAT
TAATTAAAAAAGCTTTTAAGCGTCCACTCGCTGAAAAAGAGCAAAAAATA
ACAAGGGAGTGTTGAAAGCACATTTAAATTGTATTTATTCAATGTTTATA
TATTTTGATCTTTAAAAAGGCAGTAACAAATTACAAAATGTGCACTTTTA
AATAACGCGCCAAATATGACTCGCCTATAGATGGCGCACTTACACGTTAC
AATCGATGTTACGATATATCCATCTATTCTTTCATTCACAAGTCTATCTG
CGCGGGTTGCCGCTAGATGGCGCCTAACAGAACACTGTTTATTGACTAGT
GTGCACAAACGCTCCACATCTGAAGACTAGAGTTGAAAAACGACAGTGCG
AGACGGCTTCTAGAACAAAAAAAAAAAAAAAAAAA

MIP14788.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG31752.a 1570 CG31752.a 1..1570 1..1570 7850 100 Plus
CG31752-RA 1074 CG31752-RA 254..1074 445..1265 4105 100 Plus
CG31752-RA 1074 CG31752-RA 7..255 93..341 1245 100 Plus
CG10600.a 4441 CG10600.a 1..51 1527..1577 255 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:24:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 18838386..18839614 1566..338 6145 100 Minus
chr2L 23010047 chr2L 18839671..18839919 341..93 1245 100 Minus
chr2L 23010047 chr2L 18839976..18840067 92..1 460 100 Minus
chr2L 23010047 chr2L 18838891..18838974 1103..1020 240 85.7 Minus
chr2L 23010047 chr2L 18838849..18838932 1061..978 240 85.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:17:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18839617..18840856 1577..338 6200 100 Minus
2L 23513712 2L 18840914..18841162 341..93 1245 100 Minus
2L 23513712 2L 18841219..18841310 92..1 460 100 Minus
2L 23513712 2L 18840091..18840174 1061..978 240 85.7 Minus
2L 23513712 2L 18840133..18840216 1103..1020 240 85.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18839617..18840856 1577..338 6200 100 Minus
2L 23513712 2L 18840914..18841162 341..93 1245 100 Minus
2L 23513712 2L 18841219..18841310 92..1 460 100 Minus
Blast to na_te.dros performed 2019-03-16 01:24:49
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 3119..3301 1263..1444 119 53.8 Plus
gypsy7 5486 gypsy7 GYPSY7 5486bp 1912..1964 1325..1273 112 67.9 Minus
Tc1 1666 Tc1 TC1 1666bp 15..118 1243..1341 112 62.3 Plus

MIP14788.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:26:03 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 18839671..18839919 93..341 100 <- Minus
chr2L 18839976..18840067 1..92 100   Minus
chr2L 18838386..18839610 342..1566 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:29 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RA 1..244 89..330 99 == Plus
CG31752-RA 245..1074 437..1265 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:43:02 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RA 1..244 89..330 99 == Plus
CG31752-RA 245..1074 437..1265 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:55:21 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RB 1..1233 33..1265 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:33:11 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RB 1..1233 33..1265 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-12 11:22:37 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RA 1..244 89..330 99 == Plus
CG31752-RA 245..1074 437..1265 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:43:02 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RA 1..244 89..330 99 == Plus
CG31752-RA 245..1074 437..1265 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:55:21 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RB 1..1566 1..1566 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:33:11 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
CG31752-RB 1..1566 1..1566 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18839628..18840852 342..1566 100 <- Minus
2L 18840914..18841162 93..341 100 <- Minus
2L 18841219..18841310 1..92 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18839628..18840852 342..1566 100 <- Minus
2L 18840914..18841162 93..341 100 <- Minus
2L 18841219..18841310 1..92 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18839628..18840852 342..1566 100 <- Minus
2L 18840914..18841162 93..341 100 <- Minus
2L 18841219..18841310 1..92 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:55:21 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18839628..18840852 342..1566 100 <- Minus
arm_2L 18840914..18841162 93..341 100 <- Minus
arm_2L 18841219..18841310 1..92 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:06 Download gff for MIP14788.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18839628..18840852 342..1566 100 <- Minus
2L 18840914..18841162 93..341 100 <- Minus
2L 18841219..18841310 1..92 100   Minus

MIP14788.pep Sequence

Translation from 32 to 1264

> MIP14788.pep
MEKKNKCCKHFKDHGAQKPSQLNEHKEHKLRDHYRKERMKSSENVQKSYK
HNYTTNQNQIRQDYYCDHSWEDRESPSNHEDHAQYLFSKKCFNVNYHPAQ
NEKWKHQSKLKVMMQPSSNYTPKQAIVPAYLLNDRKRQKPVIEHSCGDYL
LYKNQNYEADPSSKSEQCEVEGGYNNITPHRLNHHQKQKKDSDLLNAAKA
HCQAAAERFQNKFPSCSKCSSSNESQSKPSRITVISAKSGDDLRAAVRSQ
IEVQEALNAFTLEVKDKREEVPSEEERSTKPKKSKQITSHTQAEKVDPTA
ECAQLDTLGVDDLELVDLSGSPSDAAITNVDVSDSPGDAAITKMDLRDSP
TDADINKVIDPVIRNIQRMYLNTLKDEMSLMEYLVTVPELIKKAFKRPLA
EKEQKITREC*

MIP14788.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20681-PA 359 GF20681-PA 174..358 201..405 247 35.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:33:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21680-PA 336 GG21680-PA 4..335 22..409 868 53.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG31752-PB 410 CG31752-PB 1..410 1..410 2169 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:34:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17020-PA 446 GI17020-PA 214..427 139..396 177 28.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:34:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17058-PA 340 GM17058-PA 3..336 21..396 1330 72.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21805-PA 343 GD21805-PA 1..339 39..410 1393 75.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24483-PA 364 GJ24483-PA 88..351 85..396 180 28.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23773-PA 446 GK23773-PA 191..435 143..396 156 30.6 Plus

MIP14788.hyp Sequence

Translation from 32 to 1264

> MIP14788.hyp
MEKKNKCCKHFKDHGAQKPSQLNEHKEHKLRDHYRKERMKSSENVQKSYK
HNYTTNQNQIRQDYYCDHSWEDRESPSNHEDHAQYLFSKKCFNVNYHPAQ
NEKWKHQSKLKVMMQPSSNYTPKQAIVPAYLLNDRKRQKPVIEHSCGDYL
LYKNQNYEADPSSKSEQCEVEGGYNNITPHRLNHHQKQKKDSDLLNAAKA
HCQAAAERFQNKFPSCSKCSSSNESQSKPSRITVISAKSGDDLRAAVRSQ
IEVQEALNAFTLEVKDKREEVPSEEERSTKPKKSKQITSHTQAEKVDPTA
ECAQLDTLGVDDLELVDLSGSPSDAAITNVDVSDSPGDAAITKMDLRDSP
TDADINKVIDPVIRNIQRMYLNTLKDEMSLMEYLVTVPELIKKAFKRPLA
EKEQKITREC*

MIP14788.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31752-PB 410 CG31752-PB 1..410 1..410 2169 100 Plus