Clone Sequence Records
MIP14788.complete Sequence
1585 bp assembled on 2009-10-12
GenBank Submission: BT100017.1
> MIP14788.complete
TACGCCTGATCAATCTACTCTAATCTTAGACTATGGAGAAAAAAAACAAA
TGTTGTAAGCACTTTAAGGACCATGGGGCGCAGAAACCATCACAACTCAA
TGAGCACAAGGAGCATAAATTAAGGGACCATTACCGCAAGGAACGAATGA
AGTCTTCAGAGAATGTGCAAAAGTCCTACAAACATAATTATACGACAAAT
CAAAATCAGATACGGCAGGACTATTATTGCGATCATTCGTGGGAGGATCG
TGAGTCTCCTTCTAACCATGAAGACCATGCTCAGTATTTGTTTTCCAAAA
AATGTTTCAATGTTAATTATCACCCGGCACAAAATGAGAAGTGGAAACAC
CAGTCGAAATTAAAGGTGATGATGCAACCCAGTTCAAATTACACACCCAA
GCAAGCAATTGTTCCAGCATATCTCCTTAATGATAGAAAAAGGCAGAAAC
CAGTCATAGAACACAGCTGTGGGGACTACCTTCTCTATAAGAATCAAAAC
TATGAAGCGGACCCATCTAGTAAAAGTGAGCAGTGTGAGGTCGAGGGTGG
TTATAATAACATAACCCCACATCGTTTAAACCACCACCAGAAGCAAAAGA
AAGACTCTGATTTACTTAATGCAGCTAAGGCTCATTGCCAGGCTGCTGCC
GAAAGATTCCAGAATAAGTTTCCTTCATGCAGTAAGTGTTCCTCCTCCAA
CGAATCCCAATCGAAACCATCCAGAATAACCGTGATCAGTGCGAAAAGCG
GAGACGATCTCAGAGCGGCTGTTCGGTCCCAAATAGAGGTCCAAGAGGCC
TTGAATGCGTTTACACTTGAAGTGAAGGATAAGAGGGAGGAAGTACCATC
CGAAGAAGAACGCAGTACCAAGCCCAAAAAGAGCAAACAAATTACGTCTC
ATACGCAAGCCGAGAAAGTGGATCCCACTGCCGAATGCGCCCAATTAGAT
ACCCTAGGGGTTGACGATTTAGAACTCGTGGATCTAAGTGGCAGTCCTAG
TGATGCCGCTATTACCAATGTGGATGTAAGTGACAGTCCTGGTGATGCAG
CTATTACCAAAATGGATCTAAGAGACAGTCCTACTGATGCAGATATTAAC
AAAGTAATTGATCCGGTTATCAGGAACATTCAGCGCATGTATCTGAACAC
TCTGAAAGACGAAATGTCCCTCATGGAGTATCTAGTTACGGTCCCGGAAT
TAATTAAAAAAGCTTTTAAGCGTCCACTCGCTGAAAAAGAGCAAAAAATA
ACAAGGGAGTGTTGAAAGCACATTTAAATTGTATTTATTCAATGTTTATA
TATTTTGATCTTTAAAAAGGCAGTAACAAATTACAAAATGTGCACTTTTA
AATAACGCGCCAAATATGACTCGCCTATAGATGGCGCACTTACACGTTAC
AATCGATGTTACGATATATCCATCTATTCTTTCATTCACAAGTCTATCTG
CGCGGGTTGCCGCTAGATGGCGCCTAACAGAACACTGTTTATTGACTAGT
GTGCACAAACGCTCCACATCTGAAGACTAGAGTTGAAAAACGACAGTGCG
AGACGGCTTCTAGAACAAAAAAAAAAAAAAAAAAA
MIP14788.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:54:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31752.a | 1570 | CG31752.a | 1..1570 | 1..1570 | 7850 | 100 | Plus |
CG31752-RA | 1074 | CG31752-RA | 254..1074 | 445..1265 | 4105 | 100 | Plus |
CG31752-RA | 1074 | CG31752-RA | 7..255 | 93..341 | 1245 | 100 | Plus |
CG10600.a | 4441 | CG10600.a | 1..51 | 1527..1577 | 255 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:24:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18838386..18839614 | 1566..338 | 6145 | 100 | Minus |
chr2L | 23010047 | chr2L | 18839671..18839919 | 341..93 | 1245 | 100 | Minus |
chr2L | 23010047 | chr2L | 18839976..18840067 | 92..1 | 460 | 100 | Minus |
chr2L | 23010047 | chr2L | 18838891..18838974 | 1103..1020 | 240 | 85.7 | Minus |
chr2L | 23010047 | chr2L | 18838849..18838932 | 1061..978 | 240 | 85.7 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:17:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:24:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18839617..18840856 | 1577..338 | 6200 | 100 | Minus |
2L | 23513712 | 2L | 18840914..18841162 | 341..93 | 1245 | 100 | Minus |
2L | 23513712 | 2L | 18841219..18841310 | 92..1 | 460 | 100 | Minus |
2L | 23513712 | 2L | 18840091..18840174 | 1061..978 | 240 | 85.7 | Minus |
2L | 23513712 | 2L | 18840133..18840216 | 1103..1020 | 240 | 85.7 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18839617..18840856 | 1577..338 | 6200 | 100 | Minus |
2L | 23513712 | 2L | 18840914..18841162 | 341..93 | 1245 | 100 | Minus |
2L | 23513712 | 2L | 18841219..18841310 | 92..1 | 460 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 01:24:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 3119..3301 | 1263..1444 | 119 | 53.8 | Plus |
gypsy7 | 5486 | gypsy7 GYPSY7 5486bp | 1912..1964 | 1325..1273 | 112 | 67.9 | Minus |
Tc1 | 1666 | Tc1 TC1 1666bp | 15..118 | 1243..1341 | 112 | 62.3 | Plus |
MIP14788.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:26:03 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18839671..18839919 | 93..341 | 100 | <- | Minus |
chr2L | 18839976..18840067 | 1..92 | 100 | | Minus |
chr2L | 18838386..18839610 | 342..1566 | 100 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:29 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RA | 1..244 | 89..330 | 99 | == | Plus |
CG31752-RA | 245..1074 | 437..1265 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:43:02 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RA | 1..244 | 89..330 | 99 | == | Plus |
CG31752-RA | 245..1074 | 437..1265 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:55:21 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RB | 1..1233 | 33..1265 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:33:11 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RB | 1..1233 | 33..1265 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-12 11:22:37 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RA | 1..244 | 89..330 | 99 | == | Plus |
CG31752-RA | 245..1074 | 437..1265 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:43:02 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RA | 1..244 | 89..330 | 99 | == | Plus |
CG31752-RA | 245..1074 | 437..1265 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:55:21 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RB | 1..1566 | 1..1566 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:33:11 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31752-RB | 1..1566 | 1..1566 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18839628..18840852 | 342..1566 | 100 | <- | Minus |
2L | 18840914..18841162 | 93..341 | 100 | <- | Minus |
2L | 18841219..18841310 | 1..92 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18839628..18840852 | 342..1566 | 100 | <- | Minus |
2L | 18840914..18841162 | 93..341 | 100 | <- | Minus |
2L | 18841219..18841310 | 1..92 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:26:03 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18839628..18840852 | 342..1566 | 100 | <- | Minus |
2L | 18840914..18841162 | 93..341 | 100 | <- | Minus |
2L | 18841219..18841310 | 1..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:55:21 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18839628..18840852 | 342..1566 | 100 | <- | Minus |
arm_2L | 18840914..18841162 | 93..341 | 100 | <- | Minus |
arm_2L | 18841219..18841310 | 1..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:06 Download gff for
MIP14788.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18839628..18840852 | 342..1566 | 100 | <- | Minus |
2L | 18840914..18841162 | 93..341 | 100 | <- | Minus |
2L | 18841219..18841310 | 1..92 | 100 | | Minus |
MIP14788.pep Sequence
Translation from 32 to 1264
> MIP14788.pep
MEKKNKCCKHFKDHGAQKPSQLNEHKEHKLRDHYRKERMKSSENVQKSYK
HNYTTNQNQIRQDYYCDHSWEDRESPSNHEDHAQYLFSKKCFNVNYHPAQ
NEKWKHQSKLKVMMQPSSNYTPKQAIVPAYLLNDRKRQKPVIEHSCGDYL
LYKNQNYEADPSSKSEQCEVEGGYNNITPHRLNHHQKQKKDSDLLNAAKA
HCQAAAERFQNKFPSCSKCSSSNESQSKPSRITVISAKSGDDLRAAVRSQ
IEVQEALNAFTLEVKDKREEVPSEEERSTKPKKSKQITSHTQAEKVDPTA
ECAQLDTLGVDDLELVDLSGSPSDAAITNVDVSDSPGDAAITKMDLRDSP
TDADINKVIDPVIRNIQRMYLNTLKDEMSLMEYLVTVPELIKKAFKRPLA
EKEQKITREC*
MIP14788.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20681-PA | 359 | GF20681-PA | 174..358 | 201..405 | 247 | 35.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21680-PA | 336 | GG21680-PA | 4..335 | 22..409 | 868 | 53.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31752-PB | 410 | CG31752-PB | 1..410 | 1..410 | 2169 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:34:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI17020-PA | 446 | GI17020-PA | 214..427 | 139..396 | 177 | 28.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:34:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17058-PA | 340 | GM17058-PA | 3..336 | 21..396 | 1330 | 72.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:34:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21805-PA | 343 | GD21805-PA | 1..339 | 39..410 | 1393 | 75.3 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:34:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ24483-PA | 364 | GJ24483-PA | 88..351 | 85..396 | 180 | 28.9 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:34:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK23773-PA | 446 | GK23773-PA | 191..435 | 143..396 | 156 | 30.6 | Plus |
MIP14788.hyp Sequence
Translation from 32 to 1264
> MIP14788.hyp
MEKKNKCCKHFKDHGAQKPSQLNEHKEHKLRDHYRKERMKSSENVQKSYK
HNYTTNQNQIRQDYYCDHSWEDRESPSNHEDHAQYLFSKKCFNVNYHPAQ
NEKWKHQSKLKVMMQPSSNYTPKQAIVPAYLLNDRKRQKPVIEHSCGDYL
LYKNQNYEADPSSKSEQCEVEGGYNNITPHRLNHHQKQKKDSDLLNAAKA
HCQAAAERFQNKFPSCSKCSSSNESQSKPSRITVISAKSGDDLRAAVRSQ
IEVQEALNAFTLEVKDKREEVPSEEERSTKPKKSKQITSHTQAEKVDPTA
ECAQLDTLGVDDLELVDLSGSPSDAAITNVDVSDSPGDAAITKMDLRDSP
TDADINKVIDPVIRNIQRMYLNTLKDEMSLMEYLVTVPELIKKAFKRPLA
EKEQKITREC*
MIP14788.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:14:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31752-PB | 410 | CG31752-PB | 1..410 | 1..410 | 2169 | 100 | Plus |