Clone MIP14842 Report

Search the DGRC for MIP14842

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:148
Well:42
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG5171-RD
Protein status:MIP14842.pep: gold
Sequenced Size:1204

Clone Sequence Records

MIP14842.complete Sequence

1204 bp assembled on 2009-10-12

GenBank Submission: BT100029.1

> MIP14842.complete
ATTTACCAGAAACTTGGAAACAAGAATCAAATTGACAGTTTTTCAGTTGG
AAAATAAGCCAAATTAAGATTGTGACCCATCAATAAGAGCAATTCGTTGG
AAAATGAAATCTATCGTATTTTTATTGGCATTACTTCTAAACGCGACAAG
GAGTTATCGGGAAATTGTGAAAATGCCTGAGAAACAAGTGGCACCTGTAA
TTAGTAATCTCGAGGATTTTGCGAATAATTTACCTGGGTATCTAATTTCT
GAAAGTCCAGTTGCCGTACTCCTGGACTACGATGGCACCCTAGCTCCCAT
TGCGGATAATCCAGCGAAGACCAAAATGCCCGTGGAACTGGAGGCCATAC
TGCACAAGATAGCCAAGCATCCCAAAGTTTTTCTCGCTGTGATCTCGGGT
CGCGGACTGAAAGATGTGCAAAAACAAGTAAATATCGATGGCATTACATA
TGCTGGTAATCATGGACTGGAAATCGAGTATCCCGATGGCTCCAGGCACG
ATTACGAGCTACCCACGGAGATCCAGAAAAACTACACACAAATGGTTAGG
GAGCTCAAGGAGAAGGTGGAGAAGAATGGAGCCTGGGTGGAGGATAAGAA
GGTGTCACTCACCTACCACTACAGAGATACGCCCGCAGCCCTGAAGGATC
AGCAAAAGCAGTTGGCTTCGGAGATCTGCACAAAGTTCGGATTCCGTGCG
AATCAGGCCCATGAAGCCATCGAAGCTAAGCCCCCAGTGAATTGGAACAA
GGGAGAGGCTGCCGTGTATATTCTGAAGCAGAAATTCGGGGATAATTGGT
CGCAGAAAGTGAGTGTGGTCTTTGCGGGCGATGACACCACCGATGAAGAT
GCCATGAGAGTGCTTCGAGGCTTGGGTCGCTCGTTTAGAATTTCTGCTGA
TGCCCAGATTCAAACTTATGCGGATTTCCGGTTGCCCAAGCAGGCTGTAA
TGACCGATCTTCTCAAATGGATAGCCAATGTGTATGTTTCTTAGATGTAA
TCGAATTTATAAAATCTAAAAAGTTTGTTGATTTGTTACATACATATAAT
ATAATTTGAAATTCTGTTTTTGCATAAGCAATATTGAAATTTAATATAAA
ATGTATATGTATTTGATTAGTTAGTGGCATTAGAATAAATTATATGCTTT
TAATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA

MIP14842.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:54:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG5171-RC 1255 CG5171-RC 87..1136 105..1154 5250 100 Plus
CG5171-RA 1296 CG5171-RA 128..1177 105..1154 5250 100 Plus
CG5171-RB 1543 CG5171-RB 375..1424 105..1154 5250 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:41:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7402588..7403213 237..862 3085 99.5 Plus
chr2L 23010047 chr2L 7403277..7403571 860..1154 1460 99.7 Plus
chr2L 23010047 chr2L 7402274..7402409 105..240 680 100 Plus
chr2L 23010047 chr2L 7400380..7400483 1..104 520 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:17:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:41:34
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7403541..7404166 237..862 3130 100 Plus
2L 23513712 2L 7404230..7404524 860..1154 1475 100 Plus
2L 23513712 2L 7403229..7403364 105..240 680 100 Plus
2L 23513712 2L 7401335..7401438 1..104 520 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7403541..7404166 237..862 3130 100 Plus
2L 23513712 2L 7404230..7404524 860..1154 1475 100 Plus
2L 23513712 2L 7403229..7403364 105..240 680 100 Plus
2L 23513712 2L 7401335..7401438 1..104 520 100 Plus
Blast to na_te.dros performed 2019-03-16 20:41:35
Subject Length Description Subject Range Query Range Score Percent Strand
17.6 7439 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). 2397..2477 1036..1118 139 69.4 Plus
roo 9092 roo DM_ROO 9092bp 1187..1276 1139..1053 128 62.2 Minus

MIP14842.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:42:22 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7400380..7400483 1..104 100 -> Plus
chr2L 7402274..7402406 105..237 100 -> Plus
chr2L 7402589..7403210 238..859 99 -> Plus
chr2L 7403277..7403573 860..1157 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:37 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RC 1..822 173..994 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:43:28 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..891 104..994 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:13:10 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..891 104..994 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:51:13 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..891 104..994 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-12 13:20:37 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RC 82..1138 97..1157 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:43:28 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..1156 1..1156 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:13:10 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..1156 1..1156 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:51:13 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
CG5171-RD 1..1156 1..1156 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:22 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7401335..7401438 1..104 100 -> Plus
2L 7403229..7403361 105..237 100 -> Plus
2L 7403542..7404163 238..859 100 -> Plus
2L 7404230..7404526 860..1157 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:22 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7401335..7401438 1..104 100 -> Plus
2L 7403229..7403361 105..237 100 -> Plus
2L 7403542..7404163 238..859 100 -> Plus
2L 7404230..7404526 860..1157 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:22 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7401335..7401438 1..104 100 -> Plus
2L 7403229..7403361 105..237 100 -> Plus
2L 7403542..7404163 238..859 100 -> Plus
2L 7404230..7404526 860..1157 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:13:10 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7401335..7401438 1..104 100 -> Plus
arm_2L 7403229..7403361 105..237 100 -> Plus
arm_2L 7403542..7404163 238..859 100 -> Plus
arm_2L 7404230..7404526 860..1157 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:22 Download gff for MIP14842.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7403542..7404163 238..859 100 -> Plus
2L 7404230..7404526 860..1157 99   Plus
2L 7401335..7401438 1..104 100 -> Plus
2L 7403229..7403361 105..237 100 -> Plus

MIP14842.pep Sequence

Translation from 103 to 993

> MIP14842.pep
MKSIVFLLALLLNATRSYREIVKMPEKQVAPVISNLEDFANNLPGYLISE
SPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGR
GLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRE
LKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRAN
QAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDA
MRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS*

MIP14842.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:33:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15857-PA 273 GF15857-PA 1..273 24..296 1279 85.7 Plus
Dana\GF21145-PA 809 GF21145-PA 513..768 35..290 671 45.7 Plus
Dana\GF15858-PA 276 GF15858-PA 1..270 24..294 581 41.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10474-PA 273 GG10474-PA 1..273 24..296 1349 92.7 Plus
Dere\GG24998-PA 809 GG24998-PA 513..768 35..290 667 45.3 Plus
Dere\GG10475-PA 276 GG10475-PA 1..270 24..294 580 41.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:33:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13732-PA 275 GH13732-PA 1..273 24..296 1183 76.9 Plus
Dgri\GH13731-PA 273 GH13731-PA 1..273 24..296 1137 73.6 Plus
Dgri\GH13210-PA 809 GH13210-PA 513..768 35..290 674 45.7 Plus
Dgri\GH13733-PA 275 GH13733-PA 1..270 24..294 571 40.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:50:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG5171-PD 296 CG5171-PD 1..296 1..296 1523 100 Plus
CG5171-PF 273 CG5171-PF 1..273 24..296 1417 100 Plus
CG5171-PE 273 CG5171-PE 1..273 24..296 1417 100 Plus
CG5171-PA 273 CG5171-PA 1..273 24..296 1417 100 Plus
CG5171-PB 273 CG5171-PB 1..273 24..296 1417 100 Plus
Tps1-PA 809 CG4104-PA 513..768 35..290 651 45.3 Plus
CG5177-PB 276 CG5177-PB 1..270 24..294 585 41.5 Plus
CG5177-PA 276 CG5177-PA 1..270 24..294 585 41.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:33:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23729-PA 273 GI23729-PA 1..273 24..296 1190 78 Plus
Dmoj\GI22062-PA 809 GI22062-PA 513..768 35..290 663 45.3 Plus
Dmoj\GI23740-PA 276 GI23740-PA 1..253 24..277 583 42.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15110-PA 809 GL15110-PA 513..768 35..290 675 46.5 Plus
Dper\GL25814-PA 276 GL25814-PA 1..270 24..294 619 43.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:33:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18709-PA 273 GA18709-PA 1..273 24..296 1221 79.9 Plus
Dpse\GA17960-PA 809 GA17960-PA 513..768 35..290 675 46.5 Plus
Dpse\GA18712-PA 276 GA18712-PA 1..270 24..294 572 40.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16411-PA 273 GM16411-PA 1..273 24..296 1434 97.8 Plus
Dsec\GM18467-PA 796 GM18467-PA 500..755 35..290 672 45.7 Plus
Dsec\GM16422-PA 276 GM16422-PA 1..270 24..294 580 41.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:33:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23468-PA 273 GD23468-PA 1..273 24..296 1436 97.8 Plus
Dsim\GD23282-PA 809 GD23282-PA 513..768 35..290 672 45.7 Plus
Dsim\GD23469-PA 276 GD23469-PA 1..270 24..294 580 41.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20926-PA 273 GJ20926-PA 1..273 24..296 1173 76.6 Plus
Dvir\GJ16123-PA 809 GJ16123-PA 513..768 35..290 662 45.3 Plus
Dvir\GJ20937-PA 276 GJ20937-PA 1..270 24..294 570 40.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:33:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24303-PA 272 GK24303-PA 1..272 24..295 1219 80.5 Plus
Dwil\GK24698-PA 809 GK24698-PA 513..768 35..290 663 44.9 Plus
Dwil\GK24304-PA 276 GK24304-PA 1..270 24..294 579 40.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:33:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14513-PA 273 GE14513-PA 1..273 24..296 1386 94.1 Plus
Dyak\GE18284-PA 809 GE18284-PA 513..768 35..290 667 45.3 Plus
Dyak\GE14524-PA 276 GE14524-PA 1..270 24..294 580 41.2 Plus

MIP14842.hyp Sequence

Translation from 103 to 993

> MIP14842.hyp
MKSIVFLLALLLNATRSYREIVKMPEKQVAPVISNLEDFANNLPGYLISE
SPVAVLLDYDGTLAPIADNPAKTKMPVELEAILHKIAKHPKVFLAVISGR
GLKDVQKQVNIDGITYAGNHGLEIEYPDGSRHDYELPTEIQKNYTQMVRE
LKEKVEKNGAWVEDKKVSLTYHYRDTPAALKDQQKQLASEICTKFGFRAN
QAHEAIEAKPPVNWNKGEAAVYILKQKFGDNWSQKVSVVFAGDDTTDEDA
MRVLRGLGRSFRISADAQIQTYADFRLPKQAVMTDLLKWIANVYVS*

MIP14842.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG5171-PD 296 CG5171-PD 1..296 1..296 1523 100 Plus
CG5171-PF 273 CG5171-PF 1..273 24..296 1417 100 Plus
CG5171-PE 273 CG5171-PE 1..273 24..296 1417 100 Plus
CG5171-PA 273 CG5171-PA 1..273 24..296 1417 100 Plus
CG5171-PB 273 CG5171-PB 1..273 24..296 1417 100 Plus