Clone MIP15303 Report

Search the DGRC for MIP15303

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:153
Well:3
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG13992-RA
Protein status:MIP15303.pep: gold
Sequenced Size:2340

Clone Sequence Records

MIP15303.complete Sequence

2340 bp assembled on 2010-01-25

GenBank Submission: BT120174.1

> MIP15303.complete
ATTCAGTGATACGATTTTCAAGTGAATAAAACTCCGATTACCAGTGCAAT
ATACCAGAACAACGCGGTTAATAGAGGAAAAACATAATTCAGACAAACGA
GAAAAATTACAAAAGACCGCTTCGAGGAAATCAGTTGGCAGAGTTAAAGA
CTATAAAAGCGCTGCCCATCGGCAAACGGAAGTTAGTGAGCGGAAGAAGA
ACATGGATATCCAACCACAGGCCTTGAAGCTGATCTTCCTTTGGGCATGC
CTGGCCATTGGGCTAACGGTGTTACCAGGAGCAACTGCATCCGGACATGA
GGCCAGTCCAGCTTCGAGGGATCTACTGAATCGCAGCAAACGCACCATGA
CTACCATCTGCGTGGAGATTAGGCCAAGTAGTCCGCAGGATGAGCCGTAT
TATATGTGCCGGGGAGCCAACTTCGGTGGCGACAGTAGCCAGCAAAGTTG
TGTGGAGGTCAGAAGCCAAGGTGGCCAGGGGGAGCCATTCTACATGTGCC
AGGGAGCGAAATCCACAGAACCCGCAATCGAGAATCAACCCTCCATGGAG
CATATGCCTCCGTTTAATCCTCAACCCGCTGAACATCATGATTACGGTCA
CAACTTTCCCGTGTTTCCCGCCTTTGAGGGCGGGTCATATCCCCAGCAGC
CCGTCACAGAAGATCCCACTCGCATTCTCCAAGTCCAGCCAGCGGGTCCG
ACGTCATACCAGGAGAAGCCCCACCAGCAGCCTAATCCTCAGCAGCATCA
GCCCCACGCCCAGTACGGATTCTACGGAGGCCCTATGGCAGCCCCTCCAA
CTGCACCTGCAGCGGAGTCAGCTGGCATGCAAGAATTTCATCACCCAATT
GTGGGCAGCCCGCCAGCAGCTCCACCAGGAGTTCCAGCTGGCCCAAGCCC
AGCGTCCACGGCCGCTTCGTATGATCCTGCAGCATTTGCGAGGTCGTCAA
GTCGCCCCAACGAGAACCCAGTAGCCGGAAATGGTAGACATCGATTCACT
ATCGACGAGGAGGTGCTGGCAGTGCCGGATGTGGGTTTTAGGCGAGAGGA
GCTCCAACAGCAATACCGTAGGCCAGTGAGTCAACCGCGACCAGAAGATC
AGTTGATGTGGGTGCCGTTGTCGCAGACGCAGGATCCCGAAAACGATCCG
GTTATGAAGGCATTCTACAGCAGCCTGGGAGACGAAAGACATCCCACACA
GGAGGCACCGGTGAGCAACCAGGATGAGCCCATGTTGGGACAAATGTCTC
CTGGCTACAGCCCCTACAACAATCAATACCCAGAGGCTCCTGCCCCACCC
ACTCTGCCGCCACCACCTCCAACCTATTCCCAAGCAGATGTAACTCCCTC
TGCCAACACATATTGTAATGGATGTCCTCCCACAGCACCACCAATTCAAT
GTCCAGTGGACAACGGGGTGAGCTACAGTACCACCTGTCCGAGCTTCCAA
CCGGTCATTATAAGCATGCCCTGCTACGCACAACGAGCACCAACTCCCTA
CTTTGGGCTTCCCAGAGCACCACCAGCATTGGCTCCAGCAGGTTCCTTTG
GAGGTGGATTTGGGCTGGGAGCACAGCTGGGAAGCCCTTTTGGCATGTCT
CCCCAGATGGGAGGACAGGGATACGACATGGAGCACCAGGTGGGTGGCCC
CTTTGGCATGGGCATGCAGCTTGGAATGGGAATGAACCCATTCGGACCCT
TCGGAGCCCTCAATCCTTTCAATCCTTTCAACAGAGTTCTGGGAGCACCA
GCTCCCGCTGCTCCAACGCAAAATGGTAACTTTTTCCAGCGCGTCTTCAA
ATTCAACCAGGACGCTGCCTCCACCTCAACAACAGAAGCTGCTCCTACCA
CAGAAGTTCAATCGGAAAGATCGGGCAAGCTGAACTTCTCGAGTAGCACT
CCGGCGCCACCCAGCTCAGAACAGCCAGATACCATTGTGGGTGATGACCA
CGACAGTGATGAGGCTGAGGACTCTGCTGAAGATTTTGACAAGGAAGATG
ATACGGCGATGACCACACCGCTACCAGCCTCCGAGCCAGATGATTCCGCT
GACACATCCGGAGTTCCGGCCATTGTGAGCAAGGCGACGGAACTGCTCAA
GCCAACGGAGAAACGGAAGCGACACCGTCAGCGCTCCAGCGGACGTAGTC
CCCAAAAGCATAGATACCTGCAGCAGTTGTAGCTCGAAGATATGTTAATG
GATCCCTCAAATTGAATAAAGTTTTATTTATATTGTCAAAAGAATAGTAC
TTTAGTACTAGGCAGGTGTAGTTGCGACTCTTTATCAAAATATAAATCAA
AAGTTGAAATATAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP15303.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13992.b 2311 CG13992.b 1..2309 11..2324 11425 99.6 Plus
CG13992.a 2116 CG13992.a 1..2116 70..2182 10510 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:13:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5964441..5966614 2311..138 10870 100 Minus
chr2L 23010047 chr2L 5966666..5966803 138..1 690 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:18:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:13:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5965377..5967563 2324..138 10890 99.9 Minus
2L 23513712 2L 5967615..5967752 138..1 690 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:51:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5965377..5967563 2324..138 10890 99.8 Minus
2L 23513712 2L 5967615..5967752 138..1 690 100 Minus
Blast to na_te.dros performed on 2019-03-15 21:13:50 has no hits.

MIP15303.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:14:30 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5964440..5966613 139..2312 99 <- Minus
chr2L 5966666..5966803 1..138 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-25 10:43:10 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RA 1..1980 203..2182 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:53:37 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RB 1..1980 203..2182 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:41:13 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RA 1..1980 203..2182 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:46:57 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RA 1..1980 203..2182 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-25 10:43:10 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RA 1..1980 203..2182 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:53:37 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RB 1..2062 121..2182 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:41:13 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RB 1..2310 1..2310 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:57 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
CG13992-RB 1..2310 1..2310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:30 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5965389..5967562 139..2312 99 <- Minus
2L 5967615..5967752 1..138 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:30 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5965389..5967562 139..2312 99 <- Minus
2L 5967615..5967752 1..138 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:30 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5965389..5967562 139..2312 99 <- Minus
2L 5967615..5967752 1..138 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:41:13 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5965389..5967562 139..2312 99 <- Minus
arm_2L 5967615..5967752 1..138 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:29:55 Download gff for MIP15303.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5967615..5967752 1..138 100   Minus
2L 5965389..5967562 139..2312 99 <- Minus

MIP15303.hyp Sequence

Translation from 202 to 2181

> MIP15303.hyp
MDIQPQALKLIFLWACLAIGLTVLPGATASGHEASPASRDLLNRSKRTMT
TICVEIRPSSPQDEPYYMCRGANFGGDSSQQSCVEVRSQGGQGEPFYMCQ
GAKSTEPAIENQPSMEHMPPFNPQPAEHHDYGHNFPVFPAFEGGSYPQQP
VTEDPTRILQVQPAGPTSYQEKPHQQPNPQQHQPHAQYGFYGGPMAAPPT
APAAESAGMQEFHHPIVGSPPAAPPGVPAGPSPASTAASYDPAAFARSSS
RPNENPVAGNGRHRFTIDEEVLAVPDVGFRREELQQQYRRPVSQPRPEDQ
LMWVPLSQTQDPENDPVMKAFYSSLGDERHPTQEAPVSNQDEPMLGQMSP
GYSPYNNQYPEAPAPPTLPPPPPTYSQADVTPSANTYCNGCPPTAPPIQC
PVDNGVSYSTTCPSFQPVIISMPCYAQRAPTPYFGLPRAPPALAPAGSFG
GGFGLGAQLGSPFGMSPQMGGQGYDMEHQVGGPFGMGMQLGMGMNPFGPF
GALNPFNPFNRVLGAPAPAAPTQNGNFFQRVFKFNQDAASTSTTEAAPTT
EVQSERSGKLNFSSSTPAPPSSEQPDTIVGDDHDSDEAEDSAEDFDKEDD
TAMTTPLPASEPDDSADTSGVPAIVSKATELLKPTEKRKRHRQRSSGRSP
QKHRYLQQL*

MIP15303.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:25:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13992-PB 659 CG13992-PB 1..659 1..659 3579 100 Plus
CG13992-PC 659 CG13992-PC 1..659 1..659 3579 100 Plus
CG13992-PA 659 CG13992-PA 1..659 1..659 3579 100 Plus
CG15021-PA 420 CG15021-PA 32..328 128..449 165 24 Plus

MIP15303.pep Sequence

Translation from 202 to 2181

> MIP15303.pep
MDIQPQALKLIFLWACLAIGLTVLPGATASGHEASPASRDLLNRSKRTMT
TICVEIRPSSPQDEPYYMCRGANFGGDSSQQSCVEVRSQGGQGEPFYMCQ
GAKSTEPAIENQPSMEHMPPFNPQPAEHHDYGHNFPVFPAFEGGSYPQQP
VTEDPTRILQVQPAGPTSYQEKPHQQPNPQQHQPHAQYGFYGGPMAAPPT
APAAESAGMQEFHHPIVGSPPAAPPGVPAGPSPASTAASYDPAAFARSSS
RPNENPVAGNGRHRFTIDEEVLAVPDVGFRREELQQQYRRPVSQPRPEDQ
LMWVPLSQTQDPENDPVMKAFYSSLGDERHPTQEAPVSNQDEPMLGQMSP
GYSPYNNQYPEAPAPPTLPPPPPTYSQADVTPSANTYCNGCPPTAPPIQC
PVDNGVSYSTTCPSFQPVIISMPCYAQRAPTPYFGLPRAPPALAPAGSFG
GGFGLGAQLGSPFGMSPQMGGQGYDMEHQVGGPFGMGMQLGMGMNPFGPF
GALNPFNPFNRVLGAPAPAAPTQNGNFFQRVFKFNQDAASTSTTEAAPTT
EVQSERSGKLNFSSSTPAPPSSEQPDTIVGDDHDSDEAEDSAEDFDKEDD
TAMTTPLPASEPDDSADTSGVPAIVSKATELLKPTEKRKRHRQRSSGRSP
QKHRYLQQL*

MIP15303.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14291-PA 609 GF14291-PA 1..609 1..659 1223 47.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:41:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24267-PA 687 GG24267-PA 29..687 1..659 2405 82.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10717-PA 658 GH10717-PA 33..658 40..659 502 34.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG13992-PB 659 CG13992-PB 1..659 1..659 3579 100 Plus
CG13992-PC 659 CG13992-PC 1..659 1..659 3579 100 Plus
CG13992-PA 659 CG13992-PA 1..659 1..659 3579 100 Plus
CG15021-PA 420 CG15021-PA 32..328 128..449 165 24 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:41:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11308-PA 722 GI11308-PA 40..74 40..74 156 71.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:41:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19097-PA 929 GL19097-PA 69..638 40..499 671 38.5 Plus
Dper\GL19097-PA 929 GL19097-PA 696..929 453..659 316 41.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12681-PA 912 GA12681-PA 65..641 40..502 695 38.3 Plus
Dpse\GA12681-PA 912 GA12681-PA 679..912 453..659 319 41.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17980-PA 655 GM17980-PA 1..655 1..659 2865 91 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22618-PA 606 GD22618-PA 1..606 1..659 2597 85.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12559-PA 713 GJ12559-PA 34..713 42..659 633 34.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15408-PA 692 GK15408-PA 6..332 6..325 337 35.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18964-PA 663 GE18964-PA 1..663 1..659 2556 84.5 Plus