Clone MIP15829 Report

Search the DGRC for MIP15829

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:158
Well:29
Vector:pOT2
Associated Gene/TranscriptCG8079-RD
Protein status:MIP15829.pep: gold
Sequenced Size:2123

Clone Sequence Records

MIP15829.complete Sequence

2123 bp assembled on 2010-02-01

GenBank Submission: BT120294.1

> MIP15829.complete
AAAGTTGATTTAGATTCGACGGTTGTTAAACAATGTCGTTACCGGCTGAA
GAGGAGGATTTGGCGGACACTGTCGCCAAGTACGATTCCATCGAATTGAA
GAGCATACAGGACCTGGAAACCTGCGAGCAGCAACAACTACTGCAGTACG
TCGAAAAGCTGCACGGGATTATCCGCAAATACGACACCAAACTGGCGTCC
TATAAACAAAAACTCCTACACTACGTAAGCCGGGAAGAAAAGGTTTCGTG
TGACAAAGCCAGCCAAGCAACTGAATCGGAATTACAAGAATGCCAGTATT
CCATGGAAAACGATGAGGATACTAACAAAAAAGACCAGCCCAACGATTTA
TCGGCGACGGACGCCTTCAGTTTTGTGGACGAAATGAGGCAGGCAGCCAA
GCACGCCGAAAACCTGAACAACTTCGTTTACGAGCACACCTCTGGCATGT
ACTACGATCCCAAGACGGGATACTACTATAACGCGGAGTACGGGCTGTAC
TACGATGGTAACAACGGCTGCTACTACAGCTATGATCACGCCAAAGACTC
GTACGAGTTCCACTCTCAGGCCCAGGTACAGCCTTTGAGCGACTGCGCCT
ATAGTAGTCTTTTAGCGGGGTTTCACAAACTCCGCATAGACCGAATGCGT
AGCAATGCATTAGGTAAGAGTCAAGGTCCAGAATGTGCGATAAAAACGCG
GATTTCTTTTCTTAACTTGGTTGCAGGCGAACGATGCGGCCAAACCGGAA
TCGGAGGACGAGGATTTGGAGGTGCAGTTCGATGAGCTGGGAGGCGTCAT
TACGGACCACGAAACGCTGAAGAAGATTAAGGCCGAGAAGCAAAAGGCCA
AAGATCAAGCTGAAAAATCCAAGCGCAAAGCCAAGAAAAAGAAGAGTAAA
AAGCACAGCAAGAAGAGATCCAAGAAGGAGCGCCGTCACAAGTCCAAGAA
GCGTCACAGGCATTCTGATGATGAGCGGTCTAATGATGCCGAGGAGGGCG
AGCTGTCGCAAAGCAGCGACTCCAGTTCCGACTCTAGCAACGAGGATAGC
AGCAGCAACACGGAAGACAGCAGTGTTCCAGTTTTCAAGGCTGCCGGACG
CTTTCAAGACATTGCTAAAAAGTATCCACCCTCCCTCCGCATCATTGTCC
AGGAGACTAACGTAGAGTCGCTGAAAGTGGGAAGCCTGCATCTAATCACA
TACAAAGGTGGATCTCTTGGACGGGAGGGCGCTCACGATGTTATCATTCC
GGACGTGAACGTCAGCAAGTGCCACTTAAAGTTTAAGTATGAGAACAAGT
TGGGAATCTACCAATGTCTTGATCTGGGCTCCCGAAACGGTACCATTCTC
AATGGATCCCCAATGTCCAGCGACGCCATGGATCTCGTTCACGGCAGTGT
TATCACTCTGGGCCAAACAAGACTACTGTGTCATGTCCACGAGGGTAACA
GTACCTGCGGTTTGTGCGAGCCGGGCCTTTTGATAGAGAATTCTCCGCCG
GTAGTGGCCGCTGTTGCCTCATCCACCGCATCCGTATTATCTCACAAGGA
GCAGTTAAAAAAACTGCAGCGCAAATATGGACTAGAAAACGAAAAATTCG
TTGATACTAGCGGCAATGGGCAGTCCAACTACAATGATCGTGCCGCAACA
AGGAGAGTCCAGGTGGGCAGCAGTACAGATAAAGAAAAGACTGAGGTGGC
TTGTGTGAACACTGAAATCGGTAGCTCTAATAAGGGTTTTAAAATGCTGA
GTAAATTGGGCTGGCAAAAGGGCGAAAAACTGGGCAAAACAAATGCCAGT
GCTGGACTTTTGGAGCCGATCAATGTGGTAGCCAATGAGGGCACTAGCGG
TCTGGGAAACAGTGACCCAGTGCTGTCCAGCTCCAGAACCATTGACAAAC
GGAAGCTGGCCAACTTGAAGATCACTCAGGCGCGATATCAGCGCGCCAGT
GATATGTTTGGACAATCGGATGATAGTGATTAGAAAGACATTTTGAATGA
TGTTGGAAACACATTTAATTAACAATTACTCAAACATATTTATAAGTGTA
TGTAAATATATATGTATGTATATACACATAGATTCTATGTATGTATATAT
TAATTCAAAAAAAAAAAAAAAAA

MIP15829.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG8079-RA 2282 CG8079-RA 723..2110 724..2111 6940 100 Plus
CG8079-RB 2272 CG8079-RB 717..2104 724..2111 6940 100 Plus
CG8079-RA 2282 CG8079-RA 145..725 1..581 2905 100 Plus
CG8079-RB 2272 CG8079-RB 145..720 1..576 2880 100 Plus
Fs.a 3056 Fs.a 2936..3056 2111..1991 605 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:49:41
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 11109106..11109635 579..1108 2650 100 Plus
chr2R 21145070 chr2R 11109705..11110192 1107..1594 2440 100 Plus
chr2R 21145070 chr2R 11110593..11110881 1818..2106 1445 100 Plus
chr2R 21145070 chr2R 11105642..11105867 1..226 1130 100 Plus
chr2R 21145070 chr2R 11108639..11108776 349..486 690 100 Plus
chr2R 21145070 chr2R 11105923..11106046 225..348 620 100 Plus
chr2R 21145070 chr2R 11110252..11110369 1595..1712 590 100 Plus
chr2R 21145070 chr2R 11110431..11110536 1713..1818 530 100 Plus
chr2R 21145070 chr2R 11108937..11109033 485..581 485 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:19:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15221896..15222425 579..1108 2650 100 Plus
2R 25286936 2R 15222495..15222982 1107..1594 2440 100 Plus
2R 25286936 2R 15223383..15223676 1818..2111 1470 100 Plus
2R 25286936 2R 15218432..15218657 1..226 1130 100 Plus
2R 25286936 2R 15221429..15221566 349..486 690 100 Plus
2R 25286936 2R 15218713..15218836 225..348 620 100 Plus
2R 25286936 2R 15223042..15223159 1595..1712 590 100 Plus
2R 25286936 2R 15223221..15223326 1713..1818 530 100 Plus
2R 25286936 2R 15221727..15221823 485..581 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:39:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 15223095..15223624 579..1108 2650 100 Plus
2R 25260384 2R 15223694..15224181 1107..1594 2440 100 Plus
2R 25260384 2R 15224582..15224875 1818..2111 1470 100 Plus
2R 25260384 2R 15219631..15219856 1..226 1130 100 Plus
2R 25260384 2R 15222628..15222765 349..486 690 100 Plus
2R 25260384 2R 15219912..15220035 225..348 620 100 Plus
2R 25260384 2R 15224241..15224358 1595..1712 590 100 Plus
2R 25260384 2R 15224420..15224525 1713..1818 530 100 Plus
2R 25260384 2R 15222926..15223022 485..581 485 100 Plus
Blast to na_te.dros performed on 2019-03-15 18:49:40 has no hits.

MIP15829.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:50:50 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 11105642..11105865 1..224 100 -> Plus
chr2R 11105923..11106046 225..348 100 -> Plus
chr2R 11108639..11108775 349..485 100 -> Plus
chr2R 11108938..11109033 486..581 100 -> Plus
chr2R 11109109..11109635 582..1108 100 -> Plus
chr2R 11109707..11110192 1109..1594 100 -> Plus
chr2R 11110252..11110369 1595..1712 100 -> Plus
chr2R 11110431..11110536 1713..1818 100 -> Plus
chr2R 11110594..11110881 1819..2106 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-02-03 11:20:47 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 1..536 33..568 100 == Plus
CG8079-RB 537..1800 719..1983 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:17:02 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 1..536 33..568 100 == Plus
CG8079-RB 537..1800 719..1983 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:32:58 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 1..536 33..568 100 == Plus
CG8079-RB 537..1800 719..1983 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:17 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 1..536 33..568 100 == Plus
CG8079-RB 537..1800 719..1983 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-03 11:20:47 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 52..619 1..568 100 == Plus
CG8079-RB 620..2006 719..2106 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:17:02 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RB 52..619 1..568 100 == Plus
CG8079-RB 620..2006 719..2106 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:32:58 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RD 54..2159 1..2106 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:17 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
CG8079-RD 54..2159 1..2106 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:50:50 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15218432..15218655 1..224 100 -> Plus
2R 15218713..15218836 225..348 100 -> Plus
2R 15221429..15221565 349..485 100 -> Plus
2R 15221728..15221823 486..581 100 -> Plus
2R 15221899..15222425 582..1108 100 -> Plus
2R 15222497..15222982 1109..1594 100 -> Plus
2R 15223042..15223159 1595..1712 100 -> Plus
2R 15223221..15223326 1713..1818 100 -> Plus
2R 15223384..15223671 1819..2106 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:50:50 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15218432..15218655 1..224 100 -> Plus
2R 15218713..15218836 225..348 100 -> Plus
2R 15221429..15221565 349..485 100 -> Plus
2R 15221728..15221823 486..581 100 -> Plus
2R 15221899..15222425 582..1108 100 -> Plus
2R 15222497..15222982 1109..1594 100 -> Plus
2R 15223042..15223159 1595..1712 100 -> Plus
2R 15223221..15223326 1713..1818 100 -> Plus
2R 15223384..15223671 1819..2106 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:50:50 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15218432..15218655 1..224 100 -> Plus
2R 15218713..15218836 225..348 100 -> Plus
2R 15221429..15221565 349..485 100 -> Plus
2R 15221728..15221823 486..581 100 -> Plus
2R 15221899..15222425 582..1108 100 -> Plus
2R 15222497..15222982 1109..1594 100 -> Plus
2R 15223042..15223159 1595..1712 100 -> Plus
2R 15223221..15223326 1713..1818 100 -> Plus
2R 15223384..15223671 1819..2106 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:32:58 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11110726..11110831 1713..1818 100 -> Plus
arm_2R 11110889..11111176 1819..2106 100   Plus
arm_2R 11105937..11106160 1..224 100 -> Plus
arm_2R 11106218..11106341 225..348 100 -> Plus
arm_2R 11108934..11109070 349..485 100 -> Plus
arm_2R 11109233..11109328 486..581 100 -> Plus
arm_2R 11109404..11109930 582..1108 100 -> Plus
arm_2R 11110002..11110487 1109..1594 100 -> Plus
arm_2R 11110547..11110664 1595..1712 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:06:37 Download gff for MIP15829.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15219631..15219854 1..224 100 -> Plus
2R 15219912..15220035 225..348 100 -> Plus
2R 15222628..15222764 349..485 100 -> Plus
2R 15222927..15223022 486..581 100 -> Plus
2R 15223098..15223624 582..1108 100 -> Plus
2R 15223696..15224181 1109..1594 100 -> Plus
2R 15224241..15224358 1595..1712 100 -> Plus
2R 15224420..15224525 1713..1818 100 -> Plus
2R 15224583..15224870 1819..2106 100   Plus

MIP15829.pep Sequence

Translation from 32 to 784

> MIP15829.pep
MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY
DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK
DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN
AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQPLSDCAYSSLLAGFHKL
RIDRMRSNALGKSQGPECAIKTRISFLNLVAGERCGQTGIGGRGFGGAVR
*

MIP15829.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12318-PA 611 GF12318-PA 17..179 17..178 575 68.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:00:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20505-PA 604 GG20505-PA 1..183 1..183 889 90.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20421-PA 636 GH20421-PA 17..200 15..183 563 62.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8079-PD 250 CG8079-PD 1..250 1..250 1323 100 Plus
CG8079-PE 229 CG8079-PE 1..229 1..250 1185 91.6 Plus
CG8079-PC 501 CG8079-PC 1..210 1..210 1112 100 Plus
CG8079-PA 601 CG8079-PA 1..183 1..183 974 100 Plus
CG8079-PB 599 CG8079-PB 1..181 1..181 965 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:00:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19605-PA 502 GI19605-PA 1..66 118..183 336 90.9 Plus
Dmoj\GI19604-PA 74 GI19604-PA 12..66 11..65 187 61.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11084-PA 606 GL11084-PA 1..179 1..183 595 64.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:00:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20808-PA 616 GA20808-PA 1..188 1..183 592 62.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:00:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21598-PA 603 GM21598-PA 1..183 1..183 936 95.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Hex-C-PA 601 GD11104-PA 1..183 1..183 941 96.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14969-PA 623 GJ14969-PA 19..182 17..189 569 66.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21767-PA 615 GK21767-PA 30..190 14..183 574 65.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13639-PA 602 GE13639-PA 1..183 1..183 908 92.3 Plus

MIP15829.hyp Sequence

Translation from 32 to 784

> MIP15829.hyp
MSLPAEEEDLADTVAKYDSIELKSIQDLETCEQQQLLQYVEKLHGIIRKY
DTKLASYKQKLLHYVSREEKVSCDKASQATESELQECQYSMENDEDTNKK
DQPNDLSATDAFSFVDEMRQAAKHAENLNNFVYEHTSGMYYDPKTGYYYN
AEYGLYYDGNNGCYYSYDHAKDSYEFHSQAQVQPLSDCAYSSLLAGFHKL
RIDRMRSNALGKSQGPECAIKTRISFLNLVAGERCGQTGIGGRGFGGAVR
*

MIP15829.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:00:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG8079-PD 250 CG8079-PD 1..250 1..250 1323 100 Plus
CG8079-PE 229 CG8079-PE 1..229 1..250 1185 91.6 Plus
CG8079-PC 501 CG8079-PC 1..210 1..210 1112 100 Plus
CG8079-PA 601 CG8079-PA 1..183 1..183 974 100 Plus
CG8079-PB 599 CG8079-PB 1..181 1..181 965 100 Plus