Clone MIP15905 Report

Search the DGRC for MIP15905

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:159
Well:5
Vector:pOT2
Associated Gene/TranscriptCG4019-RE
Protein status:MIP15905.pep: gold
Sequenced Size:1201

Clone Sequence Records

MIP15905.complete Sequence

1201 bp assembled on 2009-12-21

GenBank Submission: BT120066.1

> MIP15905.complete
CCGCAGCAGGCATCGTTTGTCGGATCAGCAGCATAAGTTGTGCTTCCAAA
AAAGGGTGTTTGGAAAATCGATGCCAAGTCAATGAACCTCGAGCAGCAGG
GGATGGATCCGCAAGGGGTGGAAAACCAGCAGGAAATCGTCCAGGCAGCC
GAAGGAGAACAGCAGTTGCAAAGTTGCTGTAAGGTCTTCAAAATGAAGGG
ATCGACGCTGGACAAAATCTCCGCCTTCCTCGGCGAGCTCATCGGCACCG
GCATCCTGGTCTTCCTGGGCTGCATGGGTTGCGTGAAGACGGACCTCTTT
CCCAACAACCATCTGCAGATTGTGCTGAACTTCGGCTTCGCCGTCCTCAT
CGCCATCCAGTGCTTTGGCTGCGTCTCCGGTGCCCATCTGAATCCCGCCG
TGACCGTGGCCGCCTACATCTACGAGATGGTCACCCTGCGCATGGCATTT
GCCTACTTCGCCGCCCAGATGCTGGGCGCCTTCATCGGCTACGGCCTGCT
CATGGTCCTGCTTCCCTCGCCCACACTTACGGTGGGCGCTGGGCTCTGCG
TGACCTTGCCCCACACCAGCGTAACCACGGGCCAGGCCCTCGGCATCGAG
TTCGTAATCACCTCCATCCTGGTCATCGTCTGCTGCGGAGTGTGGGATCC
GCGCAACTCCAAGTTCCATGACTCCGTGGGCATTCGATTTGGCCTGGCCA
TCGCCTGTCTCGCCTGCGCTGCCGGTCCCTTCACCGGCGGCAGCATGAAC
CCGGCCAGGTCGTTCGCCCCCGCCCTGTGGAACAAGCACTTCGAGAGCAA
CTGGATCTACTGGCTGGCCCCGCTGAGCTCCTCCGCCATCACCGCCTACG
CCTACAAGGTCGTCTTCCGCCGCGAGGTGGTTGAGGCGGAGATCACCTCC
AATGAGAAGCTGCGGCAACTGGAGGACGTCCAGCTGTCGTAAGGCCAAAG
ACATTGCTGTAGGAAAAGCCCTAACTAATTTAGTTAATATCTAAGATGCC
GAATTTTAAAATAATGCATTCGTTGTACGCTAATGTTAGCAGTGTCTTCA
CAAAGTGGCTCGAACGTTTCAAAAGGCGAACCAAGTGCACACACTTACAT
AAGCCCTTGAAACGATAAACGTCTTGGTGAAAACACTAATTGCCTTCAGA
AATAAAGAACATCGAGATTTTTAATCTAAAACCAAAAAAAAAAAAAAAAA
A

MIP15905.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019.a 1291 CG4019.a 103..1289 1..1187 5935 100 Plus
CG4019.c 1517 CG4019.c 424..1444 172..1192 5090 99.9 Plus
CG4019-RA 1191 CG4019-RA 98..1118 172..1192 5090 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19494360..19494912 724..172 2750 99.8 Minus
chr2R 21145070 chr2R 19493822..19494280 1182..724 2265 99.6 Minus
chr2R 21145070 chr2R 19495160..19495332 173..1 850 99.4 Minus
chr2R 21145070 chr2R 19490872..19491047 500..325 400 81.8 Minus
chr2R 21145070 chr2R 19492603..19492688 415..330 220 83.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:19:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23608131..23608683 724..172 2765 100 Minus
2R 25286936 2R 23607583..23608051 1192..724 2330 99.8 Minus
2R 25286936 2R 23608931..23609103 173..1 865 100 Minus
2R 25286936 2R 23604625..23604800 500..325 400 81.8 Minus
2R 25286936 2R 23606358..23606443 415..330 205 82.6 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23609330..23609882 724..172 2765 100 Minus
2R 25260384 2R 23608782..23609250 1192..724 2330 99.7 Minus
2R 25260384 2R 23610130..23610302 173..1 865 100 Minus
2R 25260384 2R 23605824..23605999 500..325 400 81.8 Minus
2R 25260384 2R 23607557..23607642 415..330 205 82.5 Minus
Blast to na_te.dros performed on 2019-03-16 20:43:37 has no hits.

MIP15905.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:44:17 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19493821..19494280 724..1183 99 <- Minus
chr2R 19494361..19494910 174..723 99 <- Minus
chr2R 19495160..19495332 1..173 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-12-21 16:17:37 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 14..786 166..942 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:40:37 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RC 14..786 166..942 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:13:46 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RE 1..861 82..942 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:52:46 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RE 1..861 82..942 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-21 16:17:35 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RD 78..1089 172..1183 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:40:37 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RD 78..1089 172..1183 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:13:46 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RE 1..1183 1..1183 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:52:46 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
CG4019-RE 1..1183 1..1183 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:44:17 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23607592..23608051 724..1183 100 <- Minus
2R 23608132..23608681 174..723 100 <- Minus
2R 23608931..23609103 1..173 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:44:17 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23607592..23608051 724..1183 100 <- Minus
2R 23608132..23608681 174..723 100 <- Minus
2R 23608931..23609103 1..173 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:44:17 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23607592..23608051 724..1183 100 <- Minus
2R 23608132..23608681 174..723 100 <- Minus
2R 23608931..23609103 1..173 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:13:46 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19495115..19495574 724..1183 100 <- Minus
arm_2R 19495655..19496204 174..723 100 <- Minus
arm_2R 19496454..19496626 1..173 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:29 Download gff for MIP15905.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23608809..23609268 724..1183 100 <- Minus
2R 23609349..23609898 174..723 100 <- Minus
2R 23610148..23610320 1..173 100   Minus

MIP15905.hyp Sequence

Translation from 81 to 941

> MIP15905.hyp
MNLEQQGMDPQGVENQQEIVQAAEGEQQLQSCCKVFKMKGSTLDKISAFL
GELIGTGILVFLGCMGCVKTDLFPNNHLQIVLNFGFAVLIAIQCFGCVSG
AHLNPAVTVAAYIYEMVTLRMAFAYFAAQMLGAFIGYGLLMVLLPSPTLT
VGAGLCVTLPHTSVTTGQALGIEFVITSILVIVCCGVWDPRNSKFHDSVG
IRFGLAIACLACAAGPFTGGSMNPARSFAPALWNKHFESNWIYWLAPLSS
SAITAYAYKVVFRREVVEAEITSNEKLRQLEDVQLS*

MIP15905.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:41:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG4019-PE 286 CG4019-PE 1..286 1..286 1488 100 Plus
CG4019-PF 297 CG4019-PF 42..297 31..286 1337 100 Plus
CG4019-PC 261 CG4019-PC 7..261 32..286 1333 100 Plus
CG4019-PB 249 CG4019-PB 1..249 38..286 1295 100 Plus
CG4019-PD 249 CG4019-PD 1..249 38..286 1295 100 Plus

MIP15905.pep Sequence

Translation from 81 to 941

> MIP15905.pep
MNLEQQGMDPQGVENQQEIVQAAEGEQQLQSCCKVFKMKGSTLDKISAFL
GELIGTGILVFLGCMGCVKTDLFPNNHLQIVLNFGFAVLIAIQCFGCVSG
AHLNPAVTVAAYIYEMVTLRMAFAYFAAQMLGAFIGYGLLMVLLPSPTLT
VGAGLCVTLPHTSVTTGQALGIEFVITSILVIVCCGVWDPRNSKFHDSVG
IRFGLAIACLACAAGPFTGGSMNPARSFAPALWNKHFESNWIYWLAPLSS
SAITAYAYKVVFRREVVEAEITSNEKLRQLEDVQLS*

MIP15905.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11830-PA 244 GF11830-PA 1..244 38..281 1049 77.5 Plus
Dana\GF11832-PA 266 GF11832-PA 7..262 30..281 710 51.6 Plus
Dana\GF11831-PA 272 GF11831-PA 29..269 46..283 649 52.3 Plus
Dana\GF13068-PA 242 GF13068-PA 12..198 50..236 310 35.6 Plus
Dana\GF12394-PA 245 GF12394-PA 26..244 49..275 307 35.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20010-PA 261 GG20010-PA 7..261 32..286 1253 96.1 Plus
Dere\GG20012-PA 294 GG20012-PA 36..277 30..270 734 54.9 Plus
Dere\GG20011-PA 271 GG20011-PA 17..267 36..283 637 47.4 Plus
Dere\GG22871-PA 238 GG22871-PA 14..234 52..271 313 33 Plus
Dere\GG22646-PA 245 GG22646-PA 26..244 49..275 278 33.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21219-PA 246 GH21219-PA 1..246 38..286 1083 81.5 Plus
Dgri\GH21221-PA 259 GH21221-PA 13..257 37..276 754 57.6 Plus
Dgri\GH21220-PA 267 GH21220-PA 11..267 30..281 643 47.7 Plus
Dgri\GH20503-PA 247 GH20503-PA 26..246 49..275 289 36.4 Plus
Dgri\GH20663-PA 250 GH20663-PA 12..204 50..239 270 34.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Eglp4-PE 286 CG4019-PE 1..286 1..286 1488 100 Plus
Eglp4-PF 297 CG4019-PF 42..297 31..286 1337 100 Plus
Eglp4-PC 261 CG4019-PC 7..261 32..286 1333 100 Plus
Eglp4-PB 249 CG4019-PB 1..249 38..286 1295 100 Plus
Eglp4-PD 249 CG4019-PD 1..249 38..286 1295 100 Plus
Eglp4-PA 249 CG4019-PA 1..249 38..286 1295 100 Plus
Eglp2-PC 290 CG17664-PC 6..274 10..271 725 50.6 Plus
Eglp2-PA 265 CG17664-PA 7..249 30..271 713 53.9 Plus
Eglp3-PB 270 CG17662-PB 17..267 36..283 637 47.8 Plus
Eglp1-PA 238 CG5398-PA 14..196 52..233 347 37.7 Plus
Drip-PF 278 CG9023-PF 27..254 50..285 305 33.5 Plus
Drip-PG 233 CG9023-PG 27..232 50..263 302 35.5 Plus
Drip-PE 239 CG9023-PE 21..226 50..263 302 35.5 Plus
Drip-PD 242 CG9023-PD 24..229 50..263 302 35.5 Plus
Drip-PC 243 CG9023-PC 25..230 50..263 302 35.5 Plus
Drip-PB 245 CG9023-PB 27..232 50..263 302 35.5 Plus
Drip-PA 245 CG9023-PA 27..232 50..263 302 35.5 Plus
Prip-PD 259 CG7777-PD 12..250 37..282 289 30.9 Plus
Prip-PA 264 CG7777-PA 12..250 37..282 289 30.9 Plus
Prip-PB 268 CG7777-PB 12..250 37..282 289 30.9 Plus
Prip-PC 270 CG7777-PC 12..250 37..282 289 30.9 Plus
bib-PA 696 CG4722-PA 61..277 42..262 212 27.4 Plus
bib-PB 737 CG4722-PB 61..277 42..262 212 27.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20504-PA 249 GI20504-PA 1..249 38..286 1040 82.3 Plus
Dmoj\GI20505-PA 274 GI20505-PA 20..274 34..283 651 48.6 Plus
Dmoj\GI20506-PA 247 GI20506-PA 6..234 39..264 574 52 Plus
Dmoj\GI21049-PA 247 GI21049-PA 26..246 49..275 301 38.2 Plus
Dmoj\GI19026-PA 242 GI19026-PA 14..241 52..278 297 33.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17596-PA 249 GL17596-PA 1..249 38..286 1151 85.1 Plus
Dper\GL17598-PA 266 GL17598-PA 14..264 38..281 727 54.6 Plus
Dper\GL17597-PA 272 GL17597-PA 19..271 36..285 660 49 Plus
Dper\GL21483-PA 245 GL21483-PA 3..199 43..236 321 37.7 Plus
Dper\GL18952-PA 691 GL18952-PA 46..285 29..270 190 25.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17871-PA 249 GA17871-PA 1..249 38..286 1149 85.1 Plus
Dpse\GA24838-PA 266 GA24838-PA 14..264 38..281 729 54.6 Plus
Dpse\GA24837-PA 273 GA24837-PA 20..272 36..285 657 49 Plus
Dpse\GA26287-PA 245 GA26287-PA 3..199 43..236 324 37.7 Plus
Dpse\GA24443-PA 244 GA24443-PA 26..240 49..270 317 36.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15522-PA 261 GM15522-PA 7..261 32..286 1306 96.5 Plus
Dsec\GM15524-PA 265 GM15524-PA 7..249 30..271 716 52.7 Plus
Dsec\GM15523-PA 274 GM15523-PA 17..271 36..283 620 47.1 Plus
Dsec\GM20426-PA 245 GM20426-PA 26..244 49..275 288 34.4 Plus
Dsec\GM21291-PA 264 GM21291-PA 12..250 37..282 248 30.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25026-PA 261 GD25026-PA 7..261 32..286 1311 96.9 Plus
Dsim\GD25028-PA 265 GD25028-PA 7..249 30..271 715 52.7 Plus
Dsim\GD25027-PA 265 GD25027-PA 17..262 36..283 623 48.8 Plus
Dsim\GD10798-PA 264 GD10798-PA 12..250 37..282 248 30.9 Plus
Dsim\GD23647-PA 674 GD23647-PA 48..288 29..281 191 26 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22355-PA 252 GJ22355-PA 1..222 38..259 958 80.6 Plus
Dvir\GJ22357-PA 247 GJ22357-PA 7..246 43..277 731 57.3 Plus
Dvir\GJ22356-PA 274 GJ22356-PA 142..274 153..283 332 47 Plus
Dvir\GJ19992-PA 248 GJ19992-PA 12..202 50..239 300 35.1 Plus
Dvir\GJ21971-PA 305 GJ21971-PA 84..304 49..275 284 33 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23174-PA 249 GK23174-PA 1..249 38..286 1066 83.5 Plus
Dwil\GK23178-PA 270 GK23178-PA 11..269 30..285 806 57.3 Plus
Dwil\GK23177-PA 262 GK23177-PA 7..257 36..283 669 49.8 Plus
Dwil\GK23175-PA 238 GK23175-PA 12..235 38..265 458 42.1 Plus
Dwil\GK21884-PA 245 GK21884-PA 26..244 49..275 301 36 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11546-PA 261 GE11546-PA 7..261 32..286 1307 96.1 Plus
Dyak\GE11549-PA 265 GE11549-PA 7..249 30..271 723 53.5 Plus
Dyak\GE11548-PA 271 GE11548-PA 17..267 36..283 629 47 Plus
Dyak\GE14309-PA 238 GE14309-PA 14..202 52..239 340 38.1 Plus
Dyak\GE13520-PA 245 GE13520-PA 26..244 49..275 292 34.4 Plus