Clone MIP16231 Report

Search the DGRC for MIP16231

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:162
Well:31
Vector:pOT2|pOTB7_DraIII
Associated Gene/Transcripttko-RC
Protein status:MIP16231.pep: gold
Sequenced Size:1590

Clone Sequence Records

MIP16231.complete Sequence

1590 bp assembled on 2010-01-26

GenBank Submission: BT120214.1

> MIP16231.complete
CTGATTGTCACATTAGAATTGAATTGGAATTAGATTATTAAATATTTTAG
CGCTTTTATAACACAAAAGGCCGACTAAATAGCTTCCGAGCAAGCGCCAC
CAATCCGAGCGACGGCTGGTACTACAAACTGAACAAAAAACTACTGAACA
AAACTCCAAGAGCATGAATTTTCTGCGGCAATCCTTTGGCATTACGAAAC
AGTTGGCTTCGCAGGCTGCTCCTAAGCAGGAACTGGCCCTCAGGAGTCCG
TGACTTGGCGCATTTAGCCACCCTTCCGCTGCGAAGCGAAAACCAAATAA
ACCGGGAGCGCATAAGTGTTTGTTTTCCCCCCGACTTTCGTGCATTTCCC
CCAGGTTTTACCAACTCTTTTTGAGTTGGCCGCGCGTGGCGGCCGCACTT
TTCGCCTGCGAATATTTTCATTGCCAGTTTCACATGCACATCAACATGCA
CATTCCGCAGCTCCCCCGCTTTAGATTGGAAAAATAATTGAAAACCTGTC
ACCCCGAAAAAGAAGGAAAAGCGCGGAAACAATGGAAATGTTCAACCGCA
AAAAAAAGGTCGCAGTTTAGGAGACAATAGGTGCCGGATTTGTTTGTCCG
GCAATCCTGCATATGGAAATTATTACCTGCCGCTTGTGTTGTGTGTGGCA
TTTGGCATATTTATAATTGAAAACGCTGCTACGTCGCTTTGTTTCTGGCC
AAAAAGGCTTGACAGGATTCGGAGCGAGTACTTCCATGCTTGCGCGTCAT
TTGGCCGCAATTATTGTCGCCAGCCGCCAACTCCGTTCCACAATTCTCGA
TTTCCACAGAGATTAGCCGTATGACAAAGGAGCCAGCACAGAACCAGCGG
GCATTGTCAATCACTGACCAACTGTCCGTGGAAGTGACCCTTTTGTCCGC
ATTTCGAAGCCGGTACAGTCGTGCTTTATTGATTTCGAGCGATCTCTTTC
GCTCCCATCATTGCATTCTCAATCGAGTCGATCGATGGCCGAACCCTTGT
GTGTTTATAGTCTAGCCACTTTCTCATAATCAACTAGGAGTGTTACCTCT
AAAAATGATCATGATTGCAATCTCAAACTTGGAGCAGTTAATTTTGTTGT
ACTGGTTTTCTTTAAGCGACATATCTAACTCTTTCACTTCTTTGCCAGCC
ATCCAGTGCAGCTATGAGACCGCCGTCCGTGGAATGGCATCGCTGCAGCA
GATGCACCGCAGCGGACCGCACATAAAGACGCGTCCGCCGCGCCAGCCGC
TGGATGGAAAGCCCTTCGCCAAGGGCGTTGTCCTGAAGACGCTGATAAAG
AAGCCCAAGAAGCCGAACTCGGCCAATCGAAAGTGCGTGCTGGTGCGCCT
CTCCACCGGCAAGGAGATGGTGGCCTACATCCCCGGCATCGGGCACAACC
TGCAAGAGCACAACATTGTACTGTGCCGCGTGGGGCGTCTGCAGGACGTG
CCCGGCGTTAAGCTGAAGGCTGTGCGCGGAGTCTACGACTTGGCGCACGT
CGTCAAGAAGAGCCAATAGTTAATAACCACTTCCTAATCACGTTGTTCAA
ATGCATTGCTTCACAATCAAAAAAAAAAAAAAAAAAAAAA

MIP16231.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:40
Subject Length Description Subject Range Query Range Score Percent Strand
tko-RB 913 tko-RB 249..671 1148..1570 2115 100 Plus
tko-RB 913 tko-RB 35..250 1..216 1080 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:24:17
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 2336201..2337556 1568..215 6550 99 Minus
chrX 22417052 chrX 2337624..2337838 215..1 1045 99.1 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:19:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:24:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2442311..2443666 1570..215 6780 100 Minus
X 23542271 X 2443734..2443948 215..1 1075 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 2450409..2451764 1570..215 6780 100 Minus
X 23527363 X 2451832..2452046 215..1 1075 100 Minus
Blast to na_te.dros performed on 2019-03-16 11:24:16 has no hits.

MIP16231.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:25:01 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 2336201..2337555 216..1568 99 <- Minus
chrX 2337624..2337838 1..215 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2010-01-26 13:07:19 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 14:08:23 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:30:33 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
tko-RC 1..465 1055..1519 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:53 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
tko-RC 1..465 1055..1519 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-01-26 13:07:17 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 14:08:23 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:30:33 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
tko-RC 29..1596 1..1568 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:53 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
tko-RC 29..1596 1..1568 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:25:01 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
X 2442313..2443665 216..1568 100 <- Minus
X 2443734..2443948 1..215 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:25:01 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
X 2442313..2443665 216..1568 100 <- Minus
X 2443734..2443948 1..215 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:25:01 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
X 2442313..2443665 216..1568 100 <- Minus
X 2443734..2443948 1..215 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:30:33 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 2336346..2337698 216..1568 100 <- Minus
arm_X 2337767..2337981 1..215 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:38 Download gff for MIP16231.complete
Subject Subject Range Query Range Percent Splice Strand
X 2450411..2451763 216..1568 100 <- Minus
X 2451832..2452046 1..215 100   Minus

MIP16231.pep Sequence

Translation from 1054 to 1518

> MIP16231.pep
MIMIAISNLEQLILLYWFSLSDISNSFTSLPAIQCSYETAVRGMASLQQM
HRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLS
TGKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVV
KKSQ*

MIP16231.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:48:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21950-PA 140 GF21950-PA 18..140 32..154 622 94.3 Plus
Dana\GF12897-PA 143 GF12897-PA 31..124 56..141 136 39.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12613-PA 140 GG12613-PA 18..140 32..154 638 96.7 Plus
Dere\GG22436-PA 143 GG22436-PA 31..124 56..141 136 39.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17581-PA 143 GH17581-PA 18..143 32..154 601 90.5 Plus
Dgri\GH20043-PA 143 GH20043-PA 31..124 56..141 136 39.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:37
Subject Length Description Subject Range Query Range Score Percent Strand
tko-PC 154 CG7925-PC 1..154 1..154 791 100 Plus
tko-PB 140 CG7925-PB 18..140 32..154 639 100 Plus
RpS23-PA 143 CG8415-PA 31..124 56..141 138 39.4 Plus
RpS23-PB 143 CG8415-PB 31..124 56..141 138 39.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15180-PA 141 GI15180-PA 18..141 32..154 597 91.1 Plus
Dmoj\GI20452-PA 143 GI20452-PA 31..124 56..141 136 39.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14306-PA 140 GL14306-PA 18..139 32..153 605 92.6 Plus
Dper\GL17287-PA 143 GL17287-PA 31..124 56..141 136 39.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20693-PA 140 GA20693-PA 18..140 32..154 609 92.7 Plus
Dpse\GA21060-PA 143 GA21060-PA 31..124 56..141 136 39.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18879-PA 140 GM18879-PA 18..140 32..154 649 99.2 Plus
Dsec\GM20223-PA 143 GM20223-PA 31..124 56..141 136 39.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16364-PA 140 GD16364-PA 18..140 32..154 649 99.2 Plus
Dsim\GD25696-PA 143 GD25696-PA 31..124 56..141 136 39.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17060-PA 141 GJ17060-PA 18..141 32..154 581 89.5 Plus
Dvir\GJ22302-PA 143 GJ22302-PA 31..124 56..141 136 39.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:48:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17857-PA 111 GK17857-PA 1..110 44..153 564 97.3 Plus
Dwil\GK12483-PA 126 GK12483-PA 3..114 44..154 247 48.2 Plus
Dwil\GK21747-PA 143 GK21747-PA 31..124 56..141 136 39.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16944-PA 140 GE16944-PA 18..140 32..154 634 96.7 Plus
Dyak\GE12328-PA 143 GE12328-PA 31..124 56..141 136 39.4 Plus

MIP16231.hyp Sequence

Translation from 1054 to 1518

> MIP16231.hyp
MIMIAISNLEQLILLYWFSLSDISNSFTSLPAIQCSYETAVRGMASLQQM
HRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLS
TGKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVV
KKSQ*

MIP16231.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:08:11
Subject Length Description Subject Range Query Range Score Percent Strand
tko-PC 154 CG7925-PC 1..154 1..154 791 100 Plus
tko-PB 140 CG7925-PB 18..140 32..154 639 100 Plus
RpS23-PA 143 CG8415-PA 31..124 56..141 138 39.4 Plus
RpS23-PB 143 CG8415-PB 31..124 56..141 138 39.4 Plus