BDGP Sequence Production Resources |
Search the DGRC for MIP16350
Library: | MIP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2008-10-08 |
Comments: | |
Original Plate Number: | 163 |
Well: | 50 |
Vector: | pOT2|pOTB7_DraIII |
Associated Gene/Transcript | snama-RB |
Protein status: | MIP16350.pep: gold |
Sequenced Size: | 2202 |
2202 bp assembled on 2010-05-07
GenBank Submission: BT124892.1
> MIP16350.complete TCGGAGTTTTTATGTGCTTGCAGAGTAGTGTAAGTAATTGCTATTTTTGT GCCAGCTGCTTGCCGGTAGTAAACAACGCGCGTGAACTGTGATGCCTTGC AATCCTCAGCGCAATTCAAGGCGGTTTAAGTCCGAACGACCCAAGAAACC CGAAGTGTACGTACATATGTATGTTTTCGCGTGTGTATTTTTATGCACAT GCAATTCTATGCTGCTGCCATGCAAAGGTGCAAAAAATGCGAAATGCAAA TATCGTTCACAGAATGCCCATTGATCTGACCGGATTTTAGGTGGCACATA CGCATATGCATATAGCATGTTCCCGGAATTGTGCAACTTCGCATACATAC ATATGTAATGTCTTATGTTGGCATAATTATCCGCTGTTCAAGGGAAGTGC ATGGTGCAAATCGGGAATCTATATTCGGCATACTTTGATTTCTTTCATAT GCAACTATGTCGGTACACTATAAATTTAAGAGTACACTCAACTTTGATAC AATTACTTTTGATGGACTTCACATTTCTGTCGGGGACTTAAAAAGGGAGA TTGTGCAGCAGAAGCGACTGGGCAAAATCATCGACTTTGATCTCCAAATA ACAAATGCGCAGAGTAAAGAAGAATACAAGGACGATGGGTTCCTTATTCC CAAAAACACAACGCTGATCATATCGCGCATCCCCATCGCCCATCCCACAA AAAAGGGCTGGGAGCCACCAGCAGCAGAAAATGCCTTTTCGGCGGCGCCT GCCAAGCAGGACAACTTCAACATGGACCTGTCCAAAATGCAAGGCACGGA GGAGGACAAAATCCAGGCCATGATGATGCAGAGCACAGTCGACTATGATC CTAAGACGTACCATCGTATTAAAGGACAATCGCAAGTGGGAGAAGTTCCC GCATCCTACCGATGCAACAAATGCAAGAAAAGCGGACACTGGATCAAAAA CTGTCCCTTTGTGGGGGGAAAGGACCAGCAAGAGGTCAAACGGAATACTG GTATTCCGCGGTCTTTCCGCGACAAGCCAGATGCGGCTGAGAACGAATCA GCCGATTTTGTGCTGCCTGCTGTACAAAACCAAGAGATACCGGAGGATCT GATATGCGGCATATGCCGAGATATATTCGTCGATGCTGTCATGATACCCT GCTGCGGAAGTTCCTTTTGTGACGACTGTGTGCGAACCTCCTTATTGGAG TCAGAGGATAGTGAGTGCCCCGATTGCAAGGAGAAGAACTGTTCGCCTGG CTCCCTGATACCTAATCGGTTCTTGAGGAATTCGGTGAACGCCTTTAAAA ATGAGACTGGGTATAACAAAAGCGCGGCTAAGCCAGCTGCAGTAAAAAAT GAGGAAAAACCTCCTGTTGAAAAAGAAGTGGAGAAAAAGCCAGTCGCGGA GGTGGAACCCGAAGAGACTGAGGTGAAACCTGAAAAGCAAAAAGAATCCG AAACCAATGGCAGTAATCCGCCAAAATCGGAATCTCCAGAGCCTCCCGCA ACCACAGAACCATCACAGAAGGAGAAAGATAAATATGATTCAGACTACGA GGATAACATTACCATAAAAATGCCCCAGCCTGCAGCTGATTCTACAACAG TGCCCAGCAAAAGATCCCCCAGTTATTCCCACAGAAGTGAATCCTCTCAT CGACGGGACAGGTCGGATTATGTTTCCGATCACGATCACAAGCACCAACG TCCATCAAAATCGGAGTCTGTTAACAAGGATCGCAGTCTCCTGCCCTTGC CCATTGGCACCCTGCCTAGCTACCAGGGCCACATGATGGCCGAATCAGAA GAAGCTCGTCGATCGAGTGCCTATAAGCCCCCTTATATGCAAATGCAGCG GGGCCCACCTCCTATGCACATGATGAGTCACCACATGCCAGCCTACAACA ACGGGTTTAACAACATGGGACAGAGGCCTCCCCTCAGGTAGGTTTCTTTT CCACCCGTCCGGATCCCGCTACCATGTGGATCGAGTCAAGTGTCGAGGCC ACTGGAACTCCGAGGTGTTGACGAGTCCATACGCAGCCGGTCCTGCCTGA TCTCAATATTTTTAAGTTCCAACAGAGACTATACACACACACTAGTTAAG AGTAATTTAAGCTCTGGGCTCTGCGCCTTTATGCTTTGTTGAATATTGGT TATTCCTAATTAAAACAGTATTGCTTACAATCAAAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snama.a | 3911 | snama.a | 70..1569 | 438..1937 | 7500 | 100 | Plus |
snama-RA | 3980 | snama-RA | 98..1597 | 438..1937 | 7500 | 100 | Plus |
snama.a | 3911 | snama.a | 1..69 | 89..156 | 305 | 98.5 | Plus |
snama-RA | 3980 | snama-RA | 69..97 | 1..29 | 145 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19974916..19975486 | 1612..2182 | 2855 | 100 | Plus |
chr2R | 21145070 | chr2R | 19974039..19974517 | 858..1336 | 2380 | 99.8 | Plus |
chr2R | 21145070 | chr2R | 19972649..19973086 | 1..437 | 2065 | 98.6 | Plus |
chr2R | 21145070 | chr2R | 19974576..19974852 | 1335..1611 | 1385 | 100 | Plus |
chr2R | 21145070 | chr2R | 19973748..19973987 | 621..860 | 1185 | 99.6 | Plus |
chr2R | 21145070 | chr2R | 19973505..19973690 | 437..622 | 900 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24088942..24089514 | 1612..2184 | 2865 | 100 | Plus |
2R | 25286936 | 2R | 24088065..24088543 | 858..1336 | 2395 | 100 | Plus |
2R | 25286936 | 2R | 24086674..24087111 | 1..437 | 2140 | 99.8 | Plus |
2R | 25286936 | 2R | 24088602..24088878 | 1335..1611 | 1385 | 100 | Plus |
2R | 25286936 | 2R | 24087774..24088013 | 621..860 | 1200 | 100 | Plus |
2R | 25286936 | 2R | 24087531..24087716 | 437..622 | 930 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24090141..24090713 | 1612..2184 | 2865 | 100 | Plus |
2R | 25260384 | 2R | 24089264..24089742 | 858..1336 | 2395 | 100 | Plus |
2R | 25260384 | 2R | 24087873..24088310 | 1..437 | 2150 | 99.7 | Plus |
2R | 25260384 | 2R | 24089801..24090077 | 1335..1611 | 1385 | 100 | Plus |
2R | 25260384 | 2R | 24088973..24089212 | 621..860 | 1200 | 100 | Plus |
2R | 25260384 | 2R | 24088730..24088915 | 437..622 | 930 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19972649..19973086 | 1..437 | 98 | -> | Plus |
chr2R | 19973506..19973690 | 438..622 | 98 | -> | Plus |
chr2R | 19973750..19973984 | 623..857 | 99 | -> | Plus |
chr2R | 19974039..19974517 | 858..1336 | 99 | -> | Plus |
chr2R | 19974578..19974852 | 1337..1611 | 100 | -> | Plus |
chr2R | 19974916..19975486 | 1612..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RA | 1..1487 | 457..1943 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RA | 1..1487 | 457..1943 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RB | 1..1485 | 457..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RB | 1..1485 | 457..1941 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RA | 94..1603 | 431..1943 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RA | 94..1603 | 431..1943 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RB | 228..1972 | 438..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
snama-RB | 228..1972 | 438..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24087776..24088010 | 623..857 | 100 | -> | Plus |
2R | 24086674..24087111 | 1..437 | 99 | -> | Plus |
2R | 24087532..24087716 | 438..622 | 100 | -> | Plus |
2R | 24088065..24088543 | 858..1336 | 100 | -> | Plus |
2R | 24088604..24088878 | 1337..1611 | 100 | -> | Plus |
2R | 24088942..24089512 | 1612..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24087776..24088010 | 623..857 | 100 | -> | Plus |
2R | 24086674..24087111 | 1..437 | 99 | -> | Plus |
2R | 24087532..24087716 | 438..622 | 100 | -> | Plus |
2R | 24088065..24088543 | 858..1336 | 100 | -> | Plus |
2R | 24088604..24088878 | 1337..1611 | 100 | -> | Plus |
2R | 24088942..24089512 | 1612..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24087776..24088010 | 623..857 | 100 | -> | Plus |
2R | 24086674..24087111 | 1..437 | 99 | -> | Plus |
2R | 24087532..24087716 | 438..622 | 100 | -> | Plus |
2R | 24088065..24088543 | 858..1336 | 100 | -> | Plus |
2R | 24088604..24088878 | 1337..1611 | 100 | -> | Plus |
2R | 24088942..24089512 | 1612..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19976127..19976401 | 1337..1611 | 100 | -> | Plus |
arm_2R | 19974197..19974634 | 1..437 | 99 | -> | Plus |
arm_2R | 19975055..19975239 | 438..622 | 100 | -> | Plus |
arm_2R | 19975299..19975533 | 623..857 | 100 | -> | Plus |
arm_2R | 19975588..19976066 | 858..1336 | 100 | -> | Plus |
arm_2R | 19976465..19977035 | 1612..2182 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24089821..24090095 | 1337..1611 | 100 | -> | Plus |
2R | 24087891..24088328 | 1..437 | 99 | -> | Plus |
2R | 24088749..24088933 | 438..622 | 100 | -> | Plus |
2R | 24088993..24089227 | 623..857 | 100 | -> | Plus |
2R | 24089282..24089760 | 858..1336 | 100 | -> | Plus |
2R | 24090159..24090729 | 1612..2182 | 100 | Plus |
Translation from 456 to 1940
> MIP16350.pep MSVHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITN AQSKEEYKDDGFLIPKNTTLIISRIPIAHPTKKGWEPPAAENAFSAAPAK QDNFNMDLSKMQGTEEDKIQAMMMQSTVDYDPKTYHRIKGQSQVGEVPAS YRCNKCKKSGHWIKNCPFVGGKDQQEVKRNTGIPRSFRDKPDAAENESAD FVLPAVQNQEIPEDLICGICRDIFVDAVMIPCCGSSFCDDCVRTSLLESE DSECPDCKEKNCSPGSLIPNRFLRNSVNAFKNETGYNKSAAKPAAVKNEE KPPVEKEVEKKPVAEVEPEETEVKPEKQKESETNGSNPPKSESPEPPATT EPSQKEKDKYDSDYEDNITIKMPQPAADSTTVPSKRSPSYSHRSESSHRR DRSDYVSDHDHKHQRPSKSESVNKDRSLLPLPIGTLPSYQGHMMAESEEA RRSSAYKPPYMQMQRGPPPMHMMSHHMPAYNNGFNNMGQRPPLR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11371-PA | 1327 | GF11371-PA | 1..506 | 1..493 | 1907 | 77.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22940-PA | 1231 | GG22940-PA | 1..493 | 1..493 | 2480 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21725-PA | 1254 | GH21725-PA | 1..512 | 1..493 | 1554 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
snama-PB | 494 | CG3231-PB | 1..494 | 1..494 | 2645 | 100 | Plus |
snama-PA | 1231 | CG3231-PA | 1..493 | 1..493 | 2640 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20676-PA | 1291 | GI20676-PA | 1..503 | 1..493 | 1535 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11666-PA | 1314 | GL11666-PA | 1..545 | 1..493 | 1813 | 69.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16823-PA | 1297 | GA16823-PA | 1..528 | 1..493 | 1869 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18306-PA | 1232 | GM18306-PA | 1..493 | 1..493 | 2639 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20426-PA | 1248 | GJ20426-PA | 1..504 | 1..493 | 1513 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21919-PA | 1320 | GK21919-PA | 1..501 | 1..493 | 1733 | 69.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14378-PA | 1232 | GE14378-PA | 1..493 | 1..493 | 2450 | 95.5 | Plus |
Translation from 457 to 1941
> MIP16350.hyp MSVHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITN AQSKEEYKDDGFLIPKNTTLIISRIPIAHPTKKGWEPPAAENAFSAAPAK QDNFNMDLSKMQGTEEDKIQAMMMQSTVDYDPKTYHRIKGQSQVGEVPAS YRCNKCKKSGHWIKNCPFVGGKDQQEVKRNTGIPRSFRDKPDAAENESAD FVLPAVQNQEIPEDLICGICRDIFVDAVMIPCCGSSFCDDCVRTSLLESE DSECPDCKEKNCSPGSLIPNRFLRNSVNAFKNETGYNKSAAKPAAVKNEE KPPVEKEVEKKPVAEVEPEETEVKPEKQKESETNGSNPPKSESPEPPATT EPSQKEKDKYDSDYEDNITIKMPQPAADSTTVPSKRSPSYSHRSESSHRR DRSDYVSDHDHKHQRPSKSESVNKDRSLLPLPIGTLPSYQGHMMAESEEA RRSSAYKPPYMQMQRGPPPMHMMSHHMPAYNNGFNNMGQRPPLR*