Clone MIP16618 Report

Search the DGRC for MIP16618

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:166
Well:18
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG14190-RA
Protein status:MIP16618.pep: gold
Sequenced Size:2506

Clone Sequence Records

MIP16618.complete Sequence

2506 bp assembled on 2010-05-05

GenBank Submission: BT124874.1

> MIP16618.complete
TTCAGTTCTAGTTTCAAAGTTGTCGGAGCTCACGAAAAAAAACGGTTTCG
AGTTGAATCAAGATATTGAAGTTGCAGCAGTTTTCGTTTGATTGGCACCA
AAAGCAGAAAATGTCCGAAGAAATGGAAATTACTCCTATTACCGGAATGG
ATGAAGTGTCCGAAAAAACTGCGGAGAAAGTCTTTGCTCCAATGTTCGAA
GCAGAAATGTCCGAGAAAATGGATATAACTCCTGTTACCGGAATGGATGA
AGTGTCCGAAAAATCTGCGGAGAAAGTCTTTGCTCCAATGTTCGAAGCAG
AAATGTCCGAGGAAATGGAAATAACTCCTGTTACCGGAATGGATGAAGTG
TCCGAAAATTATGAGGAGAAGGGCATCGCGCCAATATTCAAAGCACATAT
GTCCGAGGATACGGAAAATACTCCTGTTACCGGAATGGGAGAAGTGTCTC
AAACTTATGAGGAGAACGCAATTGCGCCAATGTCTGAAATATGCGCATCA
GGTGACCCAGTATCTCCAATGGATGGAGTAGCCCAGGAAGAGAACACATT
TGCCTCCATCCCAGATGGTATAACCCGACTCAAGGACATTCTTGCTACGC
AGACATTCCTTGTCCAGAGAAATGAAACTGTTGTTCCCAGAAATGAAATG
TCCCAGATGATATCACCGTTGGTCGAAATATCACAAAACGAACAAAATAT
CAACGATCCTTCCGTGAATGAGAATCCACAAATGATCATGGATACGAGCA
CTTTTTCCACGAACGATGCTTCCACTACCAATGTCGTCTATGTGGAACAG
GAGCCAACATCGGTGGTGATGGTGGAGCAACCAAACACAATCATCGAGCT
GGTGGATTATTATGTGCCACCAGCGTCCTTGAACAACAGGACAATCCGCC
CGTTTTTCCCCATCCCAGTGCCCATGTACCCCGAATCCTCGCCGGAACCC
CCCGCCCCCAAGCCGGCGACAAAGGGTAAGCGTGGCCGGAAGCCAGGTCC
CAAACCTAAGCCGCGAGCAACCAAGCGTCGTCGCCCGCCGACGCCTCCTC
CACTGCCGCCGGTACCGAACTTCCTGGCACACGTCATCAATCCGCTGGAG
AATGAAATATATCCCAAGGTCATTGTCCAGCCGGTCTATCAGCCCTGGGT
GCTGCGCAGTGATGTGGCTCCTAAGCCGCCGCCACCCAAAGTGGCAGTCA
AGGAGGCGCCGATTCCCGTCAGCCGTCCGGTGACCAACCCCCCCAGCCGT
TCGCGGCGCGTGCTGATCAGCGCCCATCTGCGCGAGAAACTGCGACTCTT
TGGTCCGGATGTGACCATCTCGCTGATCGACGACCGGGTATCACCGCACT
TCAAGGCGGTGAGAAGGGAACCCGATGGCAGCCAGCGTCAAATATTATTC
ACCGCCCCACAGCTGCTCTCCTTTACCGCCGCCCACTTTGGCAATTGGCC
GCAGATGGTGCCCATCCAGATGCTGATGATGAAGCCTTCGCCGGCCATGT
TGTCCCATTACTTTCCCGGACCCATGGGTCAAACTTTGGTCAAGAAATGG
TTTGCCGATCAGCAGCCGCTCGATAAGGAGCCATCATTGCCCTTCAAGAT
GCCCATCGGCAGGCCACCGAAGCCCAGCAAATCCACTACAAGGCCCAGTA
AAACATATTTACATCCTGGCAAGCCCCAAGTATCCAAGCAATTTGCAGCT
CCAGCTCCCCCTGCAGTGCCTGCTCCTCGTCCAGCTGCTACATTTGCTCC
ACCACCAGGTGATGCTCCTACTTCACATCCAGCTGGTGATCCGGCTCCAG
AATCCACTCCAACTCCGGCTCCGGAATCCAATCCAGATCCGGCTCAAACT
CCCACTCTGGCTCCCACTCCAGCTCCGCCAGTTGCGCCTACTCCAGCACC
TACTGTGGCCTCTAGCCCTACGGATCCATTTGATGAGAGCATGTTTCCAC
CAATCATTCTGCCCGCTATCCTCAAGCGTTCATCCCAGGAGAGGCTGCGC
AAATCTATAATGGCCAAGCGGATCAAGGCCATGAAGGAGGCTGCAGCTGC
GGCTGCGGCTGCGGCAGAAAGTGCCAAGTTGAGTCTGAACAATGATATGC
CGGCGAAAGAGTTTTGACTCGAATAATTGAAAATTTGTGAAAACACAAAC
CAACGTCTTCGAAACAAAACACACCTCCCGAATTCCAACTAAGAAATCAG
GAGGACGAGTCAAAGAATTTGAATAAATAAACCACATAAAACATAAGAAA
ATAATACTGTAAAAACACAATTGCTCAATTAACCAGATGTGATTCAAAAG
TAAAATCTGATCATTGAAAAGTGAAAGGACAAGTCGAAGGATAAGAGGGA
TTCGGACAACTCAATGCAAGAAAATAAAATGTAGAACATGTTGAATGTAA
AAGAATTCGAAACATAAAGAAATTAGCCAAATGTCCAAAAAATTTATATT
TTGTATGTAATGTATATAAATAAATAAATAAATAAATGTAAAAAAAAAAA
AAAAAA

MIP16618.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:23:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14190-RA 2007 CG14190-RA 1..2007 111..2117 10035 100 Plus
CG14190-RA 2007 CG14190-RA 95..371 109..385 890 88 Plus
CG14190-RA 2007 CG14190-RA 191..373 109..291 390 80.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 18954341..18956736 94..2489 11965 100 Plus
chrX 22417052 chrX 18954356..18954632 205..481 890 88.1 Plus
chrX 22417052 chrX 18954452..18954728 109..385 890 88.1 Plus
chrX 22417052 chrX 18945864..18945957 1..95 425 98.9 Plus
chrX 22417052 chrX 18954356..18954538 301..483 390 80.9 Plus
chrX 22417052 chrX 18954548..18954730 109..291 390 80.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19065397..19067793 94..2490 11985 100 Plus
X 23542271 X 19065412..19065688 205..481 890 88.1 Plus
X 23542271 X 19065508..19065784 109..385 890 88.1 Plus
X 23542271 X 19056911..19057005 1..95 475 100 Plus
X 23542271 X 19065412..19065594 301..483 390 80.9 Plus
X 23542271 X 19065604..19065786 109..291 390 80.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19073495..19075891 94..2490 11985 100 Plus
X 23527363 X 19065009..19065103 1..95 475 100 Plus
Blast to na_te.dros performed 2019-03-16 05:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
Osvaldo 1543 Osvaldo OSV 1543bp 1163..1236 794..864 128 67.6 Plus
TART-C 11124 TART-C TARTC 11124bp 8315..8366 75..128 120 74.1 Plus

MIP16618.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:46:29 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 18945864..18945956 1..94 98 -> Plus
chrX 18954342..18956736 95..2489 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:04:30 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:35:28 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:22:07 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:58 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:04:29 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:35:28 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2007 111..2117 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:07 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2489 1..2489 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:58 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
CG14190-RA 1..2489 1..2489 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
X 19056911..19057004 1..94 100 -> Plus
X 19065398..19067792 95..2489 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
X 19056911..19057004 1..94 100 -> Plus
X 19065398..19067792 95..2489 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
X 19056911..19057004 1..94 100 -> Plus
X 19065398..19067792 95..2489 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:07 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18950944..18951037 1..94 100 -> Plus
arm_X 18959431..18961825 95..2489 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:54 Download gff for MIP16618.complete
Subject Subject Range Query Range Percent Splice Strand
X 19073496..19075890 95..2489 100   Plus
X 19065009..19065102 1..94 100 -> Plus

MIP16618.hyp Sequence

Translation from 110 to 2116

> MIP16618.hyp
MSEEMEITPITGMDEVSEKTAEKVFAPMFEAEMSEKMDITPVTGMDEVSE
KSAEKVFAPMFEAEMSEEMEITPVTGMDEVSENYEEKGIAPIFKAHMSED
TENTPVTGMGEVSQTYEENAIAPMSEICASGDPVSPMDGVAQEENTFASI
PDGITRLKDILATQTFLVQRNETVVPRNEMSQMISPLVEISQNEQNINDP
SVNENPQMIMDTSTFSTNDASTTNVVYVEQEPTSVVMVEQPNTIIELVDY
YVPPASLNNRTIRPFFPIPVPMYPESSPEPPAPKPATKGKRGRKPGPKPK
PRATKRRRPPTPPPLPPVPNFLAHVINPLENEIYPKVIVQPVYQPWVLRS
DVAPKPPPPKVAVKEAPIPVSRPVTNPPSRSRRVLISAHLREKLRLFGPD
VTISLIDDRVSPHFKAVRREPDGSQRQILFTAPQLLSFTAAHFGNWPQMV
PIQMLMMKPSPAMLSHYFPGPMGQTLVKKWFADQQPLDKEPSLPFKMPIG
RPPKPSKSTTRPSKTYLHPGKPQVSKQFAAPAPPAVPAPRPAATFAPPPG
DAPTSHPAGDPAPESTPTPAPESNPDPAQTPTLAPTPAPPVAPTPAPTVA
SSPTDPFDESMFPPIILPAILKRSSQERLRKSIMAKRIKAMKEAAAAAAA
AAESAKLSLNNDMPAKEF*

MIP16618.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:50:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG14190-PA 668 CG14190-PA 1..668 1..668 3492 100 Plus
CG15021-PA 420 CG15021-PA 75..382 269..606 210 28.9 Plus
CG13731-PB 792 CG13731-PB 36..332 280..598 187 27.6 Plus
CG10953-PB 278 CG10953-PB 60..226 447..619 179 33 Plus
CG10953-PA 278 CG10953-PA 60..226 447..619 179 33 Plus
CG15021-PA 420 CG15021-PA 157..287 485..614 164 32.6 Plus
CG10953-PB 278 CG10953-PB 27..255 316..609 158 26.4 Plus

MIP16618.pep Sequence

Translation from 110 to 2116

> MIP16618.pep
MSEEMEITPITGMDEVSEKTAEKVFAPMFEAEMSEKMDITPVTGMDEVSE
KSAEKVFAPMFEAEMSEEMEITPVTGMDEVSENYEEKGIAPIFKAHMSED
TENTPVTGMGEVSQTYEENAIAPMSEICASGDPVSPMDGVAQEENTFASI
PDGITRLKDILATQTFLVQRNETVVPRNEMSQMISPLVEISQNEQNINDP
SVNENPQMIMDTSTFSTNDASTTNVVYVEQEPTSVVMVEQPNTIIELVDY
YVPPASLNNRTIRPFFPIPVPMYPESSPEPPAPKPATKGKRGRKPGPKPK
PRATKRRRPPTPPPLPPVPNFLAHVINPLENEIYPKVIVQPVYQPWVLRS
DVAPKPPPPKVAVKEAPIPVSRPVTNPPSRSRRVLISAHLREKLRLFGPD
VTISLIDDRVSPHFKAVRREPDGSQRQILFTAPQLLSFTAAHFGNWPQMV
PIQMLMMKPSPAMLSHYFPGPMGQTLVKKWFADQQPLDKEPSLPFKMPIG
RPPKPSKSTTRPSKTYLHPGKPQVSKQFAAPAPPAVPAPRPAATFAPPPG
DAPTSHPAGDPAPESTPTPAPESNPDPAQTPTLAPTPAPPVAPTPAPTVA
SSPTDPFDESMFPPIILPAILKRSSQERLRKSIMAKRIKAMKEAAAAAAA
AAESAKLSLNNDMPAKEF*

MIP16618.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:04:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16015-PA 406 GF16015-PA 132..271 318..438 214 40.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19206-PA 586 GG19206-PA 48..466 94..528 930 51.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14190-PA 668 CG14190-PA 1..668 1..668 3492 100 Plus
CG15021-PA 420 CG15021-PA 75..382 269..606 210 28.9 Plus
CG13731-PB 792 CG13731-PB 36..332 280..598 187 27.6 Plus
CG10953-PB 278 CG10953-PB 60..226 447..619 179 33 Plus
CG10953-PA 278 CG10953-PA 60..226 447..619 179 33 Plus
CG15021-PA 420 CG15021-PA 157..287 485..614 164 32.6 Plus
CG10953-PB 278 CG10953-PB 27..255 316..609 158 26.4 Plus
CG10953-PA 278 CG10953-PA 27..255 316..609 158 26.4 Plus
CG15023-PC 168 CG15023-PC 39..149 490..603 153 35 Plus
CG15023-PD 169 CG15023-PD 40..150 490..603 153 35 Plus
CG15023-PB 169 CG15023-PB 40..150 490..603 153 35 Plus
CG30457-PA 189 CG30457-PA 32..163 447..587 152 35.1 Plus
CG30457-PA 189 CG30457-PA 34..167 494..609 151 35.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19516-PA 538 GM19516-PA 1..442 1..446 1503 71.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:04:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17768-PA 613 GE17768-PA 1..439 97..528 1020 56.2 Plus