Clone Sequence Records
MIP16618.complete Sequence
2506 bp assembled on 2010-05-05
GenBank Submission: BT124874.1
> MIP16618.complete
TTCAGTTCTAGTTTCAAAGTTGTCGGAGCTCACGAAAAAAAACGGTTTCG
AGTTGAATCAAGATATTGAAGTTGCAGCAGTTTTCGTTTGATTGGCACCA
AAAGCAGAAAATGTCCGAAGAAATGGAAATTACTCCTATTACCGGAATGG
ATGAAGTGTCCGAAAAAACTGCGGAGAAAGTCTTTGCTCCAATGTTCGAA
GCAGAAATGTCCGAGAAAATGGATATAACTCCTGTTACCGGAATGGATGA
AGTGTCCGAAAAATCTGCGGAGAAAGTCTTTGCTCCAATGTTCGAAGCAG
AAATGTCCGAGGAAATGGAAATAACTCCTGTTACCGGAATGGATGAAGTG
TCCGAAAATTATGAGGAGAAGGGCATCGCGCCAATATTCAAAGCACATAT
GTCCGAGGATACGGAAAATACTCCTGTTACCGGAATGGGAGAAGTGTCTC
AAACTTATGAGGAGAACGCAATTGCGCCAATGTCTGAAATATGCGCATCA
GGTGACCCAGTATCTCCAATGGATGGAGTAGCCCAGGAAGAGAACACATT
TGCCTCCATCCCAGATGGTATAACCCGACTCAAGGACATTCTTGCTACGC
AGACATTCCTTGTCCAGAGAAATGAAACTGTTGTTCCCAGAAATGAAATG
TCCCAGATGATATCACCGTTGGTCGAAATATCACAAAACGAACAAAATAT
CAACGATCCTTCCGTGAATGAGAATCCACAAATGATCATGGATACGAGCA
CTTTTTCCACGAACGATGCTTCCACTACCAATGTCGTCTATGTGGAACAG
GAGCCAACATCGGTGGTGATGGTGGAGCAACCAAACACAATCATCGAGCT
GGTGGATTATTATGTGCCACCAGCGTCCTTGAACAACAGGACAATCCGCC
CGTTTTTCCCCATCCCAGTGCCCATGTACCCCGAATCCTCGCCGGAACCC
CCCGCCCCCAAGCCGGCGACAAAGGGTAAGCGTGGCCGGAAGCCAGGTCC
CAAACCTAAGCCGCGAGCAACCAAGCGTCGTCGCCCGCCGACGCCTCCTC
CACTGCCGCCGGTACCGAACTTCCTGGCACACGTCATCAATCCGCTGGAG
AATGAAATATATCCCAAGGTCATTGTCCAGCCGGTCTATCAGCCCTGGGT
GCTGCGCAGTGATGTGGCTCCTAAGCCGCCGCCACCCAAAGTGGCAGTCA
AGGAGGCGCCGATTCCCGTCAGCCGTCCGGTGACCAACCCCCCCAGCCGT
TCGCGGCGCGTGCTGATCAGCGCCCATCTGCGCGAGAAACTGCGACTCTT
TGGTCCGGATGTGACCATCTCGCTGATCGACGACCGGGTATCACCGCACT
TCAAGGCGGTGAGAAGGGAACCCGATGGCAGCCAGCGTCAAATATTATTC
ACCGCCCCACAGCTGCTCTCCTTTACCGCCGCCCACTTTGGCAATTGGCC
GCAGATGGTGCCCATCCAGATGCTGATGATGAAGCCTTCGCCGGCCATGT
TGTCCCATTACTTTCCCGGACCCATGGGTCAAACTTTGGTCAAGAAATGG
TTTGCCGATCAGCAGCCGCTCGATAAGGAGCCATCATTGCCCTTCAAGAT
GCCCATCGGCAGGCCACCGAAGCCCAGCAAATCCACTACAAGGCCCAGTA
AAACATATTTACATCCTGGCAAGCCCCAAGTATCCAAGCAATTTGCAGCT
CCAGCTCCCCCTGCAGTGCCTGCTCCTCGTCCAGCTGCTACATTTGCTCC
ACCACCAGGTGATGCTCCTACTTCACATCCAGCTGGTGATCCGGCTCCAG
AATCCACTCCAACTCCGGCTCCGGAATCCAATCCAGATCCGGCTCAAACT
CCCACTCTGGCTCCCACTCCAGCTCCGCCAGTTGCGCCTACTCCAGCACC
TACTGTGGCCTCTAGCCCTACGGATCCATTTGATGAGAGCATGTTTCCAC
CAATCATTCTGCCCGCTATCCTCAAGCGTTCATCCCAGGAGAGGCTGCGC
AAATCTATAATGGCCAAGCGGATCAAGGCCATGAAGGAGGCTGCAGCTGC
GGCTGCGGCTGCGGCAGAAAGTGCCAAGTTGAGTCTGAACAATGATATGC
CGGCGAAAGAGTTTTGACTCGAATAATTGAAAATTTGTGAAAACACAAAC
CAACGTCTTCGAAACAAAACACACCTCCCGAATTCCAACTAAGAAATCAG
GAGGACGAGTCAAAGAATTTGAATAAATAAACCACATAAAACATAAGAAA
ATAATACTGTAAAAACACAATTGCTCAATTAACCAGATGTGATTCAAAAG
TAAAATCTGATCATTGAAAAGTGAAAGGACAAGTCGAAGGATAAGAGGGA
TTCGGACAACTCAATGCAAGAAAATAAAATGTAGAACATGTTGAATGTAA
AAGAATTCGAAACATAAAGAAATTAGCCAAATGTCCAAAAAATTTATATT
TTGTATGTAATGTATATAAATAAATAAATAAATAAATGTAAAAAAAAAAA
AAAAAA
MIP16618.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:23:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14190-RA | 2007 | CG14190-RA | 1..2007 | 111..2117 | 10035 | 100 | Plus |
CG14190-RA | 2007 | CG14190-RA | 95..371 | 109..385 | 890 | 88 | Plus |
CG14190-RA | 2007 | CG14190-RA | 191..373 | 109..291 | 390 | 80.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:45:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 18954341..18956736 | 94..2489 | 11965 | 100 | Plus |
chrX | 22417052 | chrX | 18954356..18954632 | 205..481 | 890 | 88.1 | Plus |
chrX | 22417052 | chrX | 18954452..18954728 | 109..385 | 890 | 88.1 | Plus |
chrX | 22417052 | chrX | 18945864..18945957 | 1..95 | 425 | 98.9 | Plus |
chrX | 22417052 | chrX | 18954356..18954538 | 301..483 | 390 | 80.9 | Plus |
chrX | 22417052 | chrX | 18954548..18954730 | 109..291 | 390 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:45:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 19065397..19067793 | 94..2490 | 11985 | 100 | Plus |
X | 23542271 | X | 19065412..19065688 | 205..481 | 890 | 88.1 | Plus |
X | 23542271 | X | 19065508..19065784 | 109..385 | 890 | 88.1 | Plus |
X | 23542271 | X | 19056911..19057005 | 1..95 | 475 | 100 | Plus |
X | 23542271 | X | 19065412..19065594 | 301..483 | 390 | 80.9 | Plus |
X | 23542271 | X | 19065604..19065786 | 109..291 | 390 | 80.9 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:40:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 19073495..19075891 | 94..2490 | 11985 | 100 | Plus |
X | 23527363 | X | 19065009..19065103 | 1..95 | 475 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 05:45:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Osvaldo | 1543 | Osvaldo OSV 1543bp | 1163..1236 | 794..864 | 128 | 67.6 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 8315..8366 | 75..128 | 120 | 74.1 | Plus |
MIP16618.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:46:29 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 18945864..18945956 | 1..94 | 98 | -> | Plus |
chrX | 18954342..18956736 | 95..2489 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:04:30 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:35:28 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:22:07 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:58 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:04:29 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:35:28 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2007 | 111..2117 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:22:07 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2489 | 1..2489 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:58 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14190-RA | 1..2489 | 1..2489 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19056911..19057004 | 1..94 | 100 | -> | Plus |
X | 19065398..19067792 | 95..2489 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19056911..19057004 | 1..94 | 100 | -> | Plus |
X | 19065398..19067792 | 95..2489 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:46:29 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19056911..19057004 | 1..94 | 100 | -> | Plus |
X | 19065398..19067792 | 95..2489 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:22:07 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18950944..18951037 | 1..94 | 100 | -> | Plus |
arm_X | 18959431..18961825 | 95..2489 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:08:54 Download gff for
MIP16618.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 19073496..19075890 | 95..2489 | 100 | | Plus |
X | 19065009..19065102 | 1..94 | 100 | -> | Plus |
MIP16618.hyp Sequence
Translation from 110 to 2116
> MIP16618.hyp
MSEEMEITPITGMDEVSEKTAEKVFAPMFEAEMSEKMDITPVTGMDEVSE
KSAEKVFAPMFEAEMSEEMEITPVTGMDEVSENYEEKGIAPIFKAHMSED
TENTPVTGMGEVSQTYEENAIAPMSEICASGDPVSPMDGVAQEENTFASI
PDGITRLKDILATQTFLVQRNETVVPRNEMSQMISPLVEISQNEQNINDP
SVNENPQMIMDTSTFSTNDASTTNVVYVEQEPTSVVMVEQPNTIIELVDY
YVPPASLNNRTIRPFFPIPVPMYPESSPEPPAPKPATKGKRGRKPGPKPK
PRATKRRRPPTPPPLPPVPNFLAHVINPLENEIYPKVIVQPVYQPWVLRS
DVAPKPPPPKVAVKEAPIPVSRPVTNPPSRSRRVLISAHLREKLRLFGPD
VTISLIDDRVSPHFKAVRREPDGSQRQILFTAPQLLSFTAAHFGNWPQMV
PIQMLMMKPSPAMLSHYFPGPMGQTLVKKWFADQQPLDKEPSLPFKMPIG
RPPKPSKSTTRPSKTYLHPGKPQVSKQFAAPAPPAVPAPRPAATFAPPPG
DAPTSHPAGDPAPESTPTPAPESNPDPAQTPTLAPTPAPPVAPTPAPTVA
SSPTDPFDESMFPPIILPAILKRSSQERLRKSIMAKRIKAMKEAAAAAAA
AAESAKLSLNNDMPAKEF*
MIP16618.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:50:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14190-PA | 668 | CG14190-PA | 1..668 | 1..668 | 3492 | 100 | Plus |
CG15021-PA | 420 | CG15021-PA | 75..382 | 269..606 | 210 | 28.9 | Plus |
CG13731-PB | 792 | CG13731-PB | 36..332 | 280..598 | 187 | 27.6 | Plus |
CG10953-PB | 278 | CG10953-PB | 60..226 | 447..619 | 179 | 33 | Plus |
CG10953-PA | 278 | CG10953-PA | 60..226 | 447..619 | 179 | 33 | Plus |
CG15021-PA | 420 | CG15021-PA | 157..287 | 485..614 | 164 | 32.6 | Plus |
CG10953-PB | 278 | CG10953-PB | 27..255 | 316..609 | 158 | 26.4 | Plus |
MIP16618.pep Sequence
Translation from 110 to 2116
> MIP16618.pep
MSEEMEITPITGMDEVSEKTAEKVFAPMFEAEMSEKMDITPVTGMDEVSE
KSAEKVFAPMFEAEMSEEMEITPVTGMDEVSENYEEKGIAPIFKAHMSED
TENTPVTGMGEVSQTYEENAIAPMSEICASGDPVSPMDGVAQEENTFASI
PDGITRLKDILATQTFLVQRNETVVPRNEMSQMISPLVEISQNEQNINDP
SVNENPQMIMDTSTFSTNDASTTNVVYVEQEPTSVVMVEQPNTIIELVDY
YVPPASLNNRTIRPFFPIPVPMYPESSPEPPAPKPATKGKRGRKPGPKPK
PRATKRRRPPTPPPLPPVPNFLAHVINPLENEIYPKVIVQPVYQPWVLRS
DVAPKPPPPKVAVKEAPIPVSRPVTNPPSRSRRVLISAHLREKLRLFGPD
VTISLIDDRVSPHFKAVRREPDGSQRQILFTAPQLLSFTAAHFGNWPQMV
PIQMLMMKPSPAMLSHYFPGPMGQTLVKKWFADQQPLDKEPSLPFKMPIG
RPPKPSKSTTRPSKTYLHPGKPQVSKQFAAPAPPAVPAPRPAATFAPPPG
DAPTSHPAGDPAPESTPTPAPESNPDPAQTPTLAPTPAPPVAPTPAPTVA
SSPTDPFDESMFPPIILPAILKRSSQERLRKSIMAKRIKAMKEAAAAAAA
AAESAKLSLNNDMPAKEF*
MIP16618.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:04:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF16015-PA | 406 | GF16015-PA | 132..271 | 318..438 | 214 | 40.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:04:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19206-PA | 586 | GG19206-PA | 48..466 | 94..528 | 930 | 51.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14190-PA | 668 | CG14190-PA | 1..668 | 1..668 | 3492 | 100 | Plus |
CG15021-PA | 420 | CG15021-PA | 75..382 | 269..606 | 210 | 28.9 | Plus |
CG13731-PB | 792 | CG13731-PB | 36..332 | 280..598 | 187 | 27.6 | Plus |
CG10953-PB | 278 | CG10953-PB | 60..226 | 447..619 | 179 | 33 | Plus |
CG10953-PA | 278 | CG10953-PA | 60..226 | 447..619 | 179 | 33 | Plus |
CG15021-PA | 420 | CG15021-PA | 157..287 | 485..614 | 164 | 32.6 | Plus |
CG10953-PB | 278 | CG10953-PB | 27..255 | 316..609 | 158 | 26.4 | Plus |
CG10953-PA | 278 | CG10953-PA | 27..255 | 316..609 | 158 | 26.4 | Plus |
CG15023-PC | 168 | CG15023-PC | 39..149 | 490..603 | 153 | 35 | Plus |
CG15023-PD | 169 | CG15023-PD | 40..150 | 490..603 | 153 | 35 | Plus |
CG15023-PB | 169 | CG15023-PB | 40..150 | 490..603 | 153 | 35 | Plus |
CG30457-PA | 189 | CG30457-PA | 32..163 | 447..587 | 152 | 35.1 | Plus |
CG30457-PA | 189 | CG30457-PA | 34..167 | 494..609 | 151 | 35.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:04:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19516-PA | 538 | GM19516-PA | 1..442 | 1..446 | 1503 | 71.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:04:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17768-PA | 613 | GE17768-PA | 1..439 | 97..528 | 1020 | 56.2 | Plus |