MIP16624.complete Sequence
1049 bp assembled on 2010-01-28
GenBank Submission: BT120241.1
> MIP16624.complete
ATCAGGTCGCAAATTGTGTGAAAATAGTTTTCTAAATTCAAAATTCAAGT
CTCTTGGTCATGTCCTCGTCTGTGGATCACGTGGTACACCACGTACTGGC
CCCAATGGCAATCAACGTCCTCGATCGCGTGGTGCCAGTAATCCGCCAAT
TGGTGATCATCATGCATCAGGCATTTCTGGTTGATCACCATGTGTCGGAG
CCCGTGATCGATGTATCCGGCATGATTCAGCCCGTTCGTAAAATAGTCTT
GATTGTAAACGATTCAACGCCGGAGCACCATGTCGACCAGGAGCAGGTGG
TCAGTTCGGATGACATTAACTACCTGATAAATGAAATTTCGCGAAGTATC
CGAAACTTGGCCCGTTCGACCTATAATACCATCTCGGCGATGGCTGGAGA
GTAGCCCTAGAATTATTTGTCATCGTGGTCGATCGAAAAATCCGACATCG
ACCCTCCTGATCCTCCAGAAGATCCTGCTCCTTTGCCCAAGATATGGAAA
TGGTTCACACGGCCATCGGAGTTGCGGGCATAGTGGCCCTGTTTATGGTA
GTTTCCCGTTCGTTAACTGAAGTGGGTGGCAGGGTGTTAAACCAAACCCG
TGATCCGATCGCTGACCTTGTGAGGCGCGGTGGTCCAGTGGCGGATCAGC
TGTCCGCCGTCGAGGGCGAAACTCCTCTAGTAGAGGGCGATCGCATGGAT
GGCGCCTGCTCCGTGGTACAAAGTATTGGAGGCAAGGCATGTGCCTTTGT
AGGACCATTGCTTCCTAAGTTTGGCAGTGAACATAATTCCGAGGGCTCCT
CCAAGGAAGACGAAAAGGATAAAAAGGACTCGGAACCGGTAGTAGTAAAA
CCTGAAACACCGCCAGCGGCAGAATTAACCGAAGAGGAGTAGGATCTAGT
CAGCAACTATGTCGAATAGAAAGCAAAAAAAAGGAAATTTTTAGTTTTCT
CTAGTTGGCCTTGGAAATAAACTTCACTCATCTTGTGGGCTTTGTGGGAT
TCGAAACCTAGAGAGCTCATTCATTTTGAAAAAAAAAAAAAAAAAAAAA
MIP16624.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:40:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42635-RA | 1028 | CG42635-RA | 1..1028 | 1..1028 | 5140 | 100 | Plus |
CG42634-RA | 1028 | CG42634-RA | 1..1028 | 1..1028 | 5140 | 100 | Plus |
CG31740-RA | 771 | CG31740-RA | 1..177 | 854..1030 | 885 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:48:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18006580..18007607 | 1..1028 | 5125 | 99.9 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:48:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18007935..18008964 | 1..1030 | 5150 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:37:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18007935..18008964 | 1..1030 | 5150 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 18:48:50 has no hits.
MIP16624.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:49:32 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18006580..18007607 | 1..1028 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-28 09:43:54 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15149-RA | 1..334 | 60..393 | 100 | == | Plus |
CG15149-RA | 335..765 | 463..892 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:13:19 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42635-RA | 1..399 | 494..892 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:32:44 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42635-RA | 1..399 | 494..892 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:04 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42635-RB | 1..399 | 494..892 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-28 09:43:54 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15149-RA | 1..334 | 60..393 | 100 | == | Plus |
CG15149-RA | 335..765 | 463..892 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:13:18 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42635-RA | 1..1028 | 1..1028 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:32:44 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42635-RA | 1..1028 | 1..1028 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:04 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42634-RA | 1..1028 | 1..1028 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:32 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18007935..18008962 | 1..1028 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:32 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18007935..18008962 | 1..1028 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:49:32 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18007935..18008962 | 1..1028 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:32:44 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18007935..18008962 | 1..1028 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:03:59 Download gff for
MIP16624.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18007935..18008962 | 1..1028 | 100 | | Plus |
MIP16624.pep Sequence
Translation from 59 to 403
> MIP16624.pep
MSSSVDHVVHHVLAPMAINVLDRVVPVIRQLVIIMHQAFLVDHHVSEPVI
DVSGMIQPVRKIVLIVNDSTPEHHVDQEQVVSSDDINYLINEISRSIRNL
ARSTYNTISAMAGE*
MIP16624.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:59:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF14809-PA | 259 | GF14809-PA | 1..112 | 1..113 | 183 | 38.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:59:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG21100-PA | 254 | GG21100-PA | 1..114 | 1..114 | 502 | 88.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42634-PA | 114 | CG42634-PA | 1..114 | 1..114 | 568 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:59:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL14598-PA | 156 | GL14598-PA | 21..156 | 9..113 | 154 | 31.4 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA25205-PA | 156 | GA25205-PA | 21..156 | 9..113 | 148 | 31.4 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:59:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17257-PA | 254 | GM17257-PA | 1..114 | 1..114 | 550 | 96.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24122-PA | 200 | GD24122-PA | 1..68 | 1..68 | 305 | 89.7 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:59:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK18903-PA | 105 | GK18903-PA | 7..103 | 12..113 | 172 | 40.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:59:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12804-PA | 254 | GE12804-PA | 1..114 | 1..114 | 491 | 86 | Plus |
MIP16624.hyp Sequence
Translation from 493 to 891
> MIP16624.hyp
MEMVHTAIGVAGIVALFMVVSRSLTEVGGRVLNQTRDPIADLVRRGGPVA
DQLSAVEGETPLVEGDRMDGACSVVQSIGGKACAFVGPLLPKFGSEHNSE
GSSKEDEKDKKDSEPVVVKPETPPAAELTEEE*
MIP16624.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:55:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42635-PA | 132 | CG42635-PA | 1..132 | 1..132 | 668 | 100 | Plus |
CG42635-PB | 132 | CG42635-PB | 1..132 | 1..132 | 668 | 100 | Plus |