Clone MIP16731 Report

Search the DGRC for MIP16731

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:167
Well:31
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG15571-RA
Protein status:MIP16731.pep: gold
Sequenced Size:570

Clone Sequence Records

MIP16731.complete Sequence

570 bp assembled on 2010-01-27

GenBank Submission: BT120230.1

> MIP16731.complete
GTGCAGTGCCTAAAGAACTTAGAACAATTAACTCGATCGAAATGACAGCC
TTCAATAGGGATCATCACTTCGCGTTTCTAATGATCGTTGCCCTCGTGGG
AAGTAGCTGTATTTTAGGATTTTCCGATGCCCAAACCTTCACAGCCGAGG
ATCGTAGCTCTATACAGAAATTCATGGATTCATTGTTGAACTTCCTGGAA
CTGGAAATTAGTAATATAACAACCACATTGCCGCCAACTTCGAATGGCAC
TACCTTGGAGACCACTACTCTGGCACCTGGAAATTCCACAGAAGTGACCA
CAGAGGTTTCGCAAACATCTACTAACTCCACATCGAGTGCCTTGGATACG
ACCACGAGCAGTTTGAATTCCACAACGGAGGATAGCGAAAATACAACCGC
AACCACAACCACCGAAGCAAATCCCACTACTATGAGGCGCAGGATTTGCT
TCAAGCGTTTCTGCTACAAGTTTAGCAACGACAAGGGTTACATAGTTTAG
ATCAAATAAACGTATAGATATGAAAAAAAAAAAAAAATTAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAA

MIP16731.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:39:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG15571-RA 459 CG15571-RA 1..459 42..500 2295 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 11:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4109965..4110491 527..1 2530 98.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 11:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4216868..4217394 527..1 2620 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:37:09
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4224966..4225492 527..1 2620 99.8 Minus
Blast to na_te.dros performed on 2019-03-16 11:25:11 has no hits.

MIP16731.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 11:26:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4109970..4110491 1..522 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-27 19:48:43 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:12:59 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 13:32:24 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:16:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-27 19:48:42 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:12:58 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..459 42..500 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 13:32:24 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..522 1..522 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:16:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
CG15571-RA 1..522 1..522 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
X 4216873..4217394 1..522 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
X 4216873..4217394 1..522 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 11:26:21 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
X 4216873..4217394 1..522 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 13:32:24 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4110906..4111427 1..522 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:03:45 Download gff for MIP16731.complete
Subject Subject Range Query Range Percent Splice Strand
X 4224971..4225492 1..522 100   Minus

MIP16731.hyp Sequence

Translation from 2 to 499

> MIP16731.hyp
AVPKELRTINSIEMTAFNRDHHFAFLMIVALVGSSCILGFSDAQTFTAED
RSSIQKFMDSLLNFLELEISNITTTLPPTSNGTTLETTTLAPGNSTEVTT
EVSQTSTNSTSSALDTTTSSLNSTTEDSENTTATTTTEANPTTMRRRICF
KRFCYKFSNDKGYIV*

MIP16731.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:49:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG15571-PA 152 CG15571-PA 1..152 14..165 770 100 Plus

MIP16731.pep Sequence

Translation from 2 to 499

> MIP16731.pep
AVPKELRTINSIEMTAFNRDHHFAFLMIVALVGSSCILGFSDAQTFTAED
RSSIQKFMDSLLNFLELEISNITTTLPPTSNGTTLETTTLAPGNSTEVTT
EVSQTSTNSTSSALDTTTSSLNSTTEDSENTTATTTTEANPTTMRRRICF
KRFCYKFSNDKGYIV*

MIP16731.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21489-PA 154 GF21489-PA 2..154 20..165 260 48.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18557-PA 156 GG18557-PA 1..156 14..165 502 82.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:50:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24677-PA 166 GH24677-PA 1..166 14..165 256 39.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG15571-PA 152 CG15571-PA 1..152 14..165 770 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16145-PA 158 GI16145-PA 1..157 14..164 259 42 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:50:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14195-PA 142 GL14195-PA 1..141 14..164 255 50.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:50:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13820-PA 142 GA13820-PA 1..141 14..164 256 50.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12700-PA 154 GM12700-PA 1..154 14..165 545 88.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:50:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16309-PA 154 GD16309-PA 1..154 14..165 543 87.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:50:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16421-PA 170 GJ16421-PA 1..169 14..164 238 36.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17599-PA 148 GK17599-PA 3..147 20..164 225 48 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:50:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16868-PA 145 GE16868-PA 1..145 14..165 561 80.9 Plus