Clone Sequence Records
MIP16756.complete Sequence
3967 bp assembled on 2010-02-17
GenBank Submission: BT120353.1
> MIP16756.complete
CAAACATTCGGTATGAATTAAATTTGCAGTTCAATTTGATGACGACTCTG
GGGAGCATGAGTTCCGTGGCTGCTGAAAATGTCATTTACGCTGACGAATC
AGAGCTTAATCCGATTGGAGAGCTCCAAGGACGACGATGAATGGAATCGG
ACATTAATGTTCTTCAATGTAGATATTTCGAGCGGAGTGTGCCGTGACCA
CCAAAACAAGATTTCGCAGCCACGGTCCTCCGTTTGCAATGGAAAGCGAC
GAGCTCCCGGCGGAGGATTGGCCAATCCAATTACGGAGAGTGTGATGTCA
TTTGTAGCAGCCAATAAATTCTATGCTCGCGAACATTCAAATTTTGATCA
TGGGAATTATACGCCACGAACTTCTGGCCGGCGAAGAGATAACTTTGCCT
ATTCCGACAGACGTCGTCATTTTTATCATAGACCAATTAAATCCGGACGA
AGTCGTGCCGCAATAGGTTTAGTTTCCCCATCTCCATCGGCCGATTCTAC
GGGTTACTATGAGAGTAAAAGGATCCACTATCCAGACTTTGAGACTGGGA
AGACGTTTGATAACTTTTACCCAGATGATGAACCTTATGAATTAGAGGAA
GATGAACCCCGTAGAGTCCTCTCAACCTCTGATTATACAAAACAACAGGA
AGATCCAAGAGCTAACAAAGAATACGCGGATGGCAGATATGACTACTACC
CCCATGGTTCAAGGTCAACAAATAGACACCACAGAGAATCTAAGAGATAC
AATAGATATCCCTTCCCTGAGCACCCAGCTCAAGATGATTACCATCGAGA
CTTCAGACGAGCTGTTCCGCGTCAGTTACGATCTAGTTCCTATAGGATGA
AACACAATTGTAGGCAGGCCTCAGGATCTTTACCACCCAACTATGCCTCA
AATTGTTACCCACATGACTCAACGGAATATGGGAGTGACAATGACTATGA
CGGTTATCCTGAAAATTACAAAAAATACAGAGATTATTATGAGGAACCGA
CGGCTGAAGCCTATCAAAACCCATATGAAGAATTCCATGACTACGAATAT
CCAGATTATAAACAAAGTAGTAAAGCCCCACCGGTACCATTTCCGAAACC
TCAACCTAAGTACTACAAAAGTTATTCTAAAGCACCGTCCCCGAACTATC
CAACCAATCCAATTTTTAGGCCTGAAATGGAATCTAAAGTAAACGAGGTT
AAGGTATCCCCTTATGAAGAAGCCGAAACTCGTCAAGTTAAATCCAATCG
AATTAAACAAAATAATCATTCAGAGGAAATTCCACGTAGAAAAGGTTTCA
ACTATGTTAAAAAGAGGAGAGAAGAACCGATAAAATACGACAAAATTTCA
AAACATATTTCTCGTCTTGCTCCACATGTACAATATGCAAGTAAAGGCCA
AAATGATAGATTTACTATGGAAGTTAATCCTCATAGAGAACGTTCTGTTT
CTAGCACCCATAGAAAAATATTTAGCGAAGAACTTCCTCACAGATATCGC
CCGAAAAAAGTTATTAATGAAACACGTGAGCCGCATAGAAACTTAAAAAC
TAAATCTGTTGGACAGTACGATAAGTCAAAAGCGCAATATGAGAGTTATA
AAACTCGTGGTCATCATCATAAATCTTCGCCAGATAGAAAAAAGTCGGTT
GACTTTGTTCGCTTCACAGACCTAAACGATGGTTCAGAAATTCCGCATAA
AATTCGTGAGAACGGTCAATCCCCATCGTCCATATTTTTCACTATCGAGA
TACCGTATAAAAAGAAGCATCGAAGATATACATATCCCCAAACAGGGGAA
TATATATCCAAAAGATCACATTCGGGCTGTGATAATTTTTCCCAAAAGTC
GTTTAGGCCGCAAACATCGCTATATGATGTTGGGAAACTACGAAAGCGAA
AAACAATGAAGCAGAAAATATCTGGATTTTTTAAGAGGTCAAAACTATGC
TTGTCGAAGTCGAACATTTTCAGAAGCAAATCTAAAATAATAAAGAAGCC
AGCACAGCGAAACCTAAACTGTGCTCAAATAAGTAATCCTAGCCCCGATT
ACTCCGTTAACTCTCCCATAGCAAGTAATCACTCTTTGGAGTCGGAAAAT
GTGAAAGTTCCGTCTCAGGAAAGTGAACACCAAAAATATGGCTTAAAAAG
GGGCAAGGAATGTCATTATCCCACTGTTTACAGGGGAACCAACAAACAGC
TGCCCGAAAATAATAACGAGATCTTTCACCAGTACTCCATGTTCAACGTT
CTGAGCTCCACCAACCAAAGGTCGAAGGTAAATAACGATGACTATGACCA
CTTCGATCCGGGATTAAGTAAACGAACCAGTCGATATTTCAGACCTGCTG
CTGATTCGCCCACGAAGAGTTCCTATAAGGAATTCGATCGCGTGTCTAGT
GGAAATTGCAGTCTCTTTAGTGAGGGAAAATGTGGAGATGCCATCGGAAA
AAGTGAAATTAACGTCTGCCTAACGATTCGGACCACTGATGTAAGTTTGA
CGGGCAGTCCGAGGATAGTGTCATCAAAAATCGTTGGGGATCATGGCTTA
TCCTCCAAAAGCAATAATGGTGAAGCCAAAATAACTCGTTCAAGGCCAGC
AATTCGTTCAGTATCGAGACAAAGTAGTGGAAGCACAATATTTGAAAGTG
CTAGTGGTGAAAACCAATTCAAGAATGTCAGGTTTTCCCCCTCGCACTTT
ACCCACAATAGTTGTTCCTCCGCCCAAAGCAGCTCCGAAAGCAATTCTTC
AAGAATTCAAACCTCCATAAATTCGCAAGAGCATGTCTGCAAAAGGAAAA
GCATTGAGGCGAGTTCCAAGCCACCAGAAATGCCTGGAAGTATTGGTAGC
TCTTCGGAATACCTTCGTCCTCGACATCGCCTTGTCACCAAATGGAGCTT
AACCAGTCAGTCCAAGCCCTATAATTCTAGGCCAGAACCAAGCCACCGCT
GGACCCCTGATAAATTAGATACAAATTCTCTAAGACCAACTTTGTTTCAA
AGCGATGTAACTAAAAGGTCAAGCCTAAAAAGGGTGGATGACAACCTTGT
GAAATCAGTGCCCAAAAGGGTAGTCTTGAAAACAAAAAGCTCGGAAAGTA
TGATTAGTGGGTCAATGTGCAGTTCTGGTAGCAGTGCGAAATCACTTTCC
ACATTTGAAATTCAGGACAAGAAGAACGATGACAGAAGTGAGTGCTACAG
ATCCCAGAGCCACCATTTTCAATTTGGCGAAGATAGGAAAATTGAGGTAT
TCCCAAGGAAAACAAGTAGTTGGCCGCGACAAAGTCCACGAAGCTTTCCA
GGGCCACCGATCCGGAACATAGATCCTGAACCTTTTGGCAAATCGACCTT
GTCACCCAAAACATCAACTCAAAGCTTAGAGTCCTCCATAAGTAGATGCT
CCAGTGATGGCTTGTCAGGAAATAATGAAGGAAGTACCAGCCACAAGCCA
AAGGATATGCAACTGGTTTGCTATCCCGATGACGATTCCAATTTAAGGAA
TTCTCGCCAGTCCCAGGTTGAATATGGAAGCGGATTCACAACTATGCGAG
GTCTAGATATTACAGAATCATCGAATCGAGGGGATCTTTGTTGTCCAAAG
CTAGTTTCTGATTTGGAGAGGGAATCCTTTTGCCCGAAAAGCATTGTGGA
GGAGCTGAAACGAGAGCTATTGCAGACCTTCAGAGCCGAACAGCAAATCA
GAAGTCAGTCGCCTTTTCTTCGACCCACTCCGCACATTATGATATTCCCC
TGTGTTCCCAGTGTCATGTGCCAGACCAGAGCAAACATTAATCCGAGTCC
CAATCTATTCCCTAGACCGGAGTCTGAAATATGCTGGATACCTAACTCCA
AGCCACAAAACCTCGCGTGAGGAATGGTCAGTTAAAGACTTAATAAAATA
TACTTTTTCTATAAAATAACATAATAAATAAAAATAAATTAAAAATATTT
AAAAAAAAAAAAAAAAA
MIP16756.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:48:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33125-RA | 3852 | CG33125-RA | 230..3852 | 248..3870 | 18115 | 100 | Plus |
CG33125-RA | 3852 | CG33125-RA | 1..170 | 79..248 | 850 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:14:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 2648134..2651831 | 3950..248 | 17890 | 99 | Minus |
chr2L | 23010047 | chr2L | 2651891..2652138 | 248..1 | 1240 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:14:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2648356..2652062 | 3954..248 | 18535 | 100 | Minus |
2L | 23513712 | 2L | 2652122..2652369 | 248..1 | 1240 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:45:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2648356..2652062 | 3954..248 | 18535 | 100 | Minus |
2L | 23513712 | 2L | 2652122..2652369 | 248..1 | 1240 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 05:14:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 1329..1681 | 1223..1559 | 139 | 55.8 | Plus |
MIP16756.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:15:38 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 2651892..2652138 | 1..247 | 100 | | Minus |
chr2L | 2648201..2651831 | 248..3883 | 99 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-02-17 17:31:31 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RA | 1..169 | 79..247 | 100 | -> | Plus |
CG33125-RA | 230..3852 | 248..3870 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:30:13 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 1..3792 | 79..3870 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:16:43 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 1..3792 | 79..3870 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:00:53 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 1..3792 | 79..3870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-17 17:31:31 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RA | 1..169 | 79..247 | 100 | -> | Plus |
CG33125-RA | 230..3852 | 248..3870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:30:13 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 1..3792 | 79..3870 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:16:43 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 1..3950 | 1..3950 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:00:53 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33125-RB | 46..3995 | 1..3950 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2648360..2652062 | 248..3950 | 100 | <- | Minus |
2L | 2652123..2652369 | 1..247 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2648360..2652062 | 248..3950 | 100 | <- | Minus |
2L | 2652123..2652369 | 1..247 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2648360..2652062 | 248..3950 | 100 | <- | Minus |
2L | 2652123..2652369 | 1..247 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:16:43 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2648360..2652062 | 248..3950 | 100 | <- | Minus |
arm_2L | 2652123..2652369 | 1..247 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:15:29 Download gff for
MIP16756.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2648360..2652062 | 248..3950 | 100 | <- | Minus |
2L | 2652123..2652369 | 1..247 | 100 | | Minus |
MIP16756.pep Sequence
Translation from 78 to 3869
> MIP16756.pep
MSFTLTNQSLIRLESSKDDDEWNRTLMFFNVDISSGVCRDHQNKISQPRS
SVCNGKRRAPGGGLANPITESVMSFVAANKFYAREHSNFDHGNYTPRTSG
RRRDNFAYSDRRRHFYHRPIKSGRSRAAIGLVSPSPSADSTGYYESKRIH
YPDFETGKTFDNFYPDDEPYELEEDEPRRVLSTSDYTKQQEDPRANKEYA
DGRYDYYPHGSRSTNRHHRESKRYNRYPFPEHPAQDDYHRDFRRAVPRQL
RSSSYRMKHNCRQASGSLPPNYASNCYPHDSTEYGSDNDYDGYPENYKKY
RDYYEEPTAEAYQNPYEEFHDYEYPDYKQSSKAPPVPFPKPQPKYYKSYS
KAPSPNYPTNPIFRPEMESKVNEVKVSPYEEAETRQVKSNRIKQNNHSEE
IPRRKGFNYVKKRREEPIKYDKISKHISRLAPHVQYASKGQNDRFTMEVN
PHRERSVSSTHRKIFSEELPHRYRPKKVINETREPHRNLKTKSVGQYDKS
KAQYESYKTRGHHHKSSPDRKKSVDFVRFTDLNDGSEIPHKIRENGQSPS
SIFFTIEIPYKKKHRRYTYPQTGEYISKRSHSGCDNFSQKSFRPQTSLYD
VGKLRKRKTMKQKISGFFKRSKLCLSKSNIFRSKSKIIKKPAQRNLNCAQ
ISNPSPDYSVNSPIASNHSLESENVKVPSQESEHQKYGLKRGKECHYPTV
YRGTNKQLPENNNEIFHQYSMFNVLSSTNQRSKVNNDDYDHFDPGLSKRT
SRYFRPAADSPTKSSYKEFDRVSSGNCSLFSEGKCGDAIGKSEINVCLTI
RTTDVSLTGSPRIVSSKIVGDHGLSSKSNNGEAKITRSRPAIRSVSRQSS
GSTIFESASGENQFKNVRFSPSHFTHNSCSSAQSSSESNSSRIQTSINSQ
EHVCKRKSIEASSKPPEMPGSIGSSSEYLRPRHRLVTKWSLTSQSKPYNS
RPEPSHRWTPDKLDTNSLRPTLFQSDVTKRSSLKRVDDNLVKSVPKRVVL
KTKSSESMISGSMCSSGSSAKSLSTFEIQDKKNDDRSECYRSQSHHFQFG
EDRKIEVFPRKTSSWPRQSPRSFPGPPIRNIDPEPFGKSTLSPKTSTQSL
ESSISRCSSDGLSGNNEGSTSHKPKDMQLVCYPDDDSNLRNSRQSQVEYG
SGFTTMRGLDITESSNRGDLCCPKLVSDLERESFCPKSIVEELKRELLQT
FRAEQQIRSQSPFLRPTPHIMIFPCVPSVMCQTRANINPSPNLFPRPESE
ICWIPNSKPQNLA*
MIP16756.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:22:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13878-PA | 117 | GF13878-PA | 1..58 | 1..57 | 155 | 53.4 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:22:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24502-PA | 1282 | GG24502-PA | 1..1280 | 1..1261 | 4753 | 71.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33125-PB | 1263 | CG33125-PB | 1..1263 | 1..1263 | 6742 | 100 | Plus |
CG33125-PC | 736 | CG33125-PC | 1..733 | 1..733 | 3971 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:22:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL26454-PA | 1017 | GL26454-PA | 1..488 | 1..591 | 223 | 24.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:22:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17301-PA | 1016 | GA17301-PA | 1..521 | 1..617 | 229 | 24.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:22:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18208-PA | 663 | GM18208-PA | 49..660 | 656..1263 | 2466 | 83.7 | Plus |
Dsec\GM18208-PA | 663 | GM18208-PA | 1..57 | 1..56 | 279 | 91.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD22813-PA | 1274 | GD22813-PA | 1..1271 | 1..1263 | 5440 | 84.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:22:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15058-PA | 654 | GE15058-PA | 1..640 | 610..1263 | 2261 | 70.6 | Plus |
MIP16756.hyp Sequence
Translation from 78 to 3869
> MIP16756.hyp
MSFTLTNQSLIRLESSKDDDEWNRTLMFFNVDISSGVCRDHQNKISQPRS
SVCNGKRRAPGGGLANPITESVMSFVAANKFYAREHSNFDHGNYTPRTSG
RRRDNFAYSDRRRHFYHRPIKSGRSRAAIGLVSPSPSADSTGYYESKRIH
YPDFETGKTFDNFYPDDEPYELEEDEPRRVLSTSDYTKQQEDPRANKEYA
DGRYDYYPHGSRSTNRHHRESKRYNRYPFPEHPAQDDYHRDFRRAVPRQL
RSSSYRMKHNCRQASGSLPPNYASNCYPHDSTEYGSDNDYDGYPENYKKY
RDYYEEPTAEAYQNPYEEFHDYEYPDYKQSSKAPPVPFPKPQPKYYKSYS
KAPSPNYPTNPIFRPEMESKVNEVKVSPYEEAETRQVKSNRIKQNNHSEE
IPRRKGFNYVKKRREEPIKYDKISKHISRLAPHVQYASKGQNDRFTMEVN
PHRERSVSSTHRKIFSEELPHRYRPKKVINETREPHRNLKTKSVGQYDKS
KAQYESYKTRGHHHKSSPDRKKSVDFVRFTDLNDGSEIPHKIRENGQSPS
SIFFTIEIPYKKKHRRYTYPQTGEYISKRSHSGCDNFSQKSFRPQTSLYD
VGKLRKRKTMKQKISGFFKRSKLCLSKSNIFRSKSKIIKKPAQRNLNCAQ
ISNPSPDYSVNSPIASNHSLESENVKVPSQESEHQKYGLKRGKECHYPTV
YRGTNKQLPENNNEIFHQYSMFNVLSSTNQRSKVNNDDYDHFDPGLSKRT
SRYFRPAADSPTKSSYKEFDRVSSGNCSLFSEGKCGDAIGKSEINVCLTI
RTTDVSLTGSPRIVSSKIVGDHGLSSKSNNGEAKITRSRPAIRSVSRQSS
GSTIFESASGENQFKNVRFSPSHFTHNSCSSAQSSSESNSSRIQTSINSQ
EHVCKRKSIEASSKPPEMPGSIGSSSEYLRPRHRLVTKWSLTSQSKPYNS
RPEPSHRWTPDKLDTNSLRPTLFQSDVTKRSSLKRVDDNLVKSVPKRVVL
KTKSSESMISGSMCSSGSSAKSLSTFEIQDKKNDDRSECYRSQSHHFQFG
EDRKIEVFPRKTSSWPRQSPRSFPGPPIRNIDPEPFGKSTLSPKTSTQSL
ESSISRCSSDGLSGNNEGSTSHKPKDMQLVCYPDDDSNLRNSRQSQVEYG
SGFTTMRGLDITESSNRGDLCCPKLVSDLERESFCPKSIVEELKRELLQT
FRAEQQIRSQSPFLRPTPHIMIFPCVPSVMCQTRANINPSPNLFPRPESE
ICWIPNSKPQNLA*
MIP16756.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:52:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33125-PB | 1263 | CG33125-PB | 1..1263 | 1..1263 | 6742 | 100 | Plus |
CG33125-PC | 736 | CG33125-PC | 1..733 | 1..733 | 3971 | 100 | Plus |