Clone MIP16756 Report

Search the DGRC for MIP16756

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:167
Well:56
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG33125-RB
Protein status:MIP16756.pep: gold
Sequenced Size:3967

Clone Sequence Records

MIP16756.complete Sequence

3967 bp assembled on 2010-02-17

GenBank Submission: BT120353.1

> MIP16756.complete
CAAACATTCGGTATGAATTAAATTTGCAGTTCAATTTGATGACGACTCTG
GGGAGCATGAGTTCCGTGGCTGCTGAAAATGTCATTTACGCTGACGAATC
AGAGCTTAATCCGATTGGAGAGCTCCAAGGACGACGATGAATGGAATCGG
ACATTAATGTTCTTCAATGTAGATATTTCGAGCGGAGTGTGCCGTGACCA
CCAAAACAAGATTTCGCAGCCACGGTCCTCCGTTTGCAATGGAAAGCGAC
GAGCTCCCGGCGGAGGATTGGCCAATCCAATTACGGAGAGTGTGATGTCA
TTTGTAGCAGCCAATAAATTCTATGCTCGCGAACATTCAAATTTTGATCA
TGGGAATTATACGCCACGAACTTCTGGCCGGCGAAGAGATAACTTTGCCT
ATTCCGACAGACGTCGTCATTTTTATCATAGACCAATTAAATCCGGACGA
AGTCGTGCCGCAATAGGTTTAGTTTCCCCATCTCCATCGGCCGATTCTAC
GGGTTACTATGAGAGTAAAAGGATCCACTATCCAGACTTTGAGACTGGGA
AGACGTTTGATAACTTTTACCCAGATGATGAACCTTATGAATTAGAGGAA
GATGAACCCCGTAGAGTCCTCTCAACCTCTGATTATACAAAACAACAGGA
AGATCCAAGAGCTAACAAAGAATACGCGGATGGCAGATATGACTACTACC
CCCATGGTTCAAGGTCAACAAATAGACACCACAGAGAATCTAAGAGATAC
AATAGATATCCCTTCCCTGAGCACCCAGCTCAAGATGATTACCATCGAGA
CTTCAGACGAGCTGTTCCGCGTCAGTTACGATCTAGTTCCTATAGGATGA
AACACAATTGTAGGCAGGCCTCAGGATCTTTACCACCCAACTATGCCTCA
AATTGTTACCCACATGACTCAACGGAATATGGGAGTGACAATGACTATGA
CGGTTATCCTGAAAATTACAAAAAATACAGAGATTATTATGAGGAACCGA
CGGCTGAAGCCTATCAAAACCCATATGAAGAATTCCATGACTACGAATAT
CCAGATTATAAACAAAGTAGTAAAGCCCCACCGGTACCATTTCCGAAACC
TCAACCTAAGTACTACAAAAGTTATTCTAAAGCACCGTCCCCGAACTATC
CAACCAATCCAATTTTTAGGCCTGAAATGGAATCTAAAGTAAACGAGGTT
AAGGTATCCCCTTATGAAGAAGCCGAAACTCGTCAAGTTAAATCCAATCG
AATTAAACAAAATAATCATTCAGAGGAAATTCCACGTAGAAAAGGTTTCA
ACTATGTTAAAAAGAGGAGAGAAGAACCGATAAAATACGACAAAATTTCA
AAACATATTTCTCGTCTTGCTCCACATGTACAATATGCAAGTAAAGGCCA
AAATGATAGATTTACTATGGAAGTTAATCCTCATAGAGAACGTTCTGTTT
CTAGCACCCATAGAAAAATATTTAGCGAAGAACTTCCTCACAGATATCGC
CCGAAAAAAGTTATTAATGAAACACGTGAGCCGCATAGAAACTTAAAAAC
TAAATCTGTTGGACAGTACGATAAGTCAAAAGCGCAATATGAGAGTTATA
AAACTCGTGGTCATCATCATAAATCTTCGCCAGATAGAAAAAAGTCGGTT
GACTTTGTTCGCTTCACAGACCTAAACGATGGTTCAGAAATTCCGCATAA
AATTCGTGAGAACGGTCAATCCCCATCGTCCATATTTTTCACTATCGAGA
TACCGTATAAAAAGAAGCATCGAAGATATACATATCCCCAAACAGGGGAA
TATATATCCAAAAGATCACATTCGGGCTGTGATAATTTTTCCCAAAAGTC
GTTTAGGCCGCAAACATCGCTATATGATGTTGGGAAACTACGAAAGCGAA
AAACAATGAAGCAGAAAATATCTGGATTTTTTAAGAGGTCAAAACTATGC
TTGTCGAAGTCGAACATTTTCAGAAGCAAATCTAAAATAATAAAGAAGCC
AGCACAGCGAAACCTAAACTGTGCTCAAATAAGTAATCCTAGCCCCGATT
ACTCCGTTAACTCTCCCATAGCAAGTAATCACTCTTTGGAGTCGGAAAAT
GTGAAAGTTCCGTCTCAGGAAAGTGAACACCAAAAATATGGCTTAAAAAG
GGGCAAGGAATGTCATTATCCCACTGTTTACAGGGGAACCAACAAACAGC
TGCCCGAAAATAATAACGAGATCTTTCACCAGTACTCCATGTTCAACGTT
CTGAGCTCCACCAACCAAAGGTCGAAGGTAAATAACGATGACTATGACCA
CTTCGATCCGGGATTAAGTAAACGAACCAGTCGATATTTCAGACCTGCTG
CTGATTCGCCCACGAAGAGTTCCTATAAGGAATTCGATCGCGTGTCTAGT
GGAAATTGCAGTCTCTTTAGTGAGGGAAAATGTGGAGATGCCATCGGAAA
AAGTGAAATTAACGTCTGCCTAACGATTCGGACCACTGATGTAAGTTTGA
CGGGCAGTCCGAGGATAGTGTCATCAAAAATCGTTGGGGATCATGGCTTA
TCCTCCAAAAGCAATAATGGTGAAGCCAAAATAACTCGTTCAAGGCCAGC
AATTCGTTCAGTATCGAGACAAAGTAGTGGAAGCACAATATTTGAAAGTG
CTAGTGGTGAAAACCAATTCAAGAATGTCAGGTTTTCCCCCTCGCACTTT
ACCCACAATAGTTGTTCCTCCGCCCAAAGCAGCTCCGAAAGCAATTCTTC
AAGAATTCAAACCTCCATAAATTCGCAAGAGCATGTCTGCAAAAGGAAAA
GCATTGAGGCGAGTTCCAAGCCACCAGAAATGCCTGGAAGTATTGGTAGC
TCTTCGGAATACCTTCGTCCTCGACATCGCCTTGTCACCAAATGGAGCTT
AACCAGTCAGTCCAAGCCCTATAATTCTAGGCCAGAACCAAGCCACCGCT
GGACCCCTGATAAATTAGATACAAATTCTCTAAGACCAACTTTGTTTCAA
AGCGATGTAACTAAAAGGTCAAGCCTAAAAAGGGTGGATGACAACCTTGT
GAAATCAGTGCCCAAAAGGGTAGTCTTGAAAACAAAAAGCTCGGAAAGTA
TGATTAGTGGGTCAATGTGCAGTTCTGGTAGCAGTGCGAAATCACTTTCC
ACATTTGAAATTCAGGACAAGAAGAACGATGACAGAAGTGAGTGCTACAG
ATCCCAGAGCCACCATTTTCAATTTGGCGAAGATAGGAAAATTGAGGTAT
TCCCAAGGAAAACAAGTAGTTGGCCGCGACAAAGTCCACGAAGCTTTCCA
GGGCCACCGATCCGGAACATAGATCCTGAACCTTTTGGCAAATCGACCTT
GTCACCCAAAACATCAACTCAAAGCTTAGAGTCCTCCATAAGTAGATGCT
CCAGTGATGGCTTGTCAGGAAATAATGAAGGAAGTACCAGCCACAAGCCA
AAGGATATGCAACTGGTTTGCTATCCCGATGACGATTCCAATTTAAGGAA
TTCTCGCCAGTCCCAGGTTGAATATGGAAGCGGATTCACAACTATGCGAG
GTCTAGATATTACAGAATCATCGAATCGAGGGGATCTTTGTTGTCCAAAG
CTAGTTTCTGATTTGGAGAGGGAATCCTTTTGCCCGAAAAGCATTGTGGA
GGAGCTGAAACGAGAGCTATTGCAGACCTTCAGAGCCGAACAGCAAATCA
GAAGTCAGTCGCCTTTTCTTCGACCCACTCCGCACATTATGATATTCCCC
TGTGTTCCCAGTGTCATGTGCCAGACCAGAGCAAACATTAATCCGAGTCC
CAATCTATTCCCTAGACCGGAGTCTGAAATATGCTGGATACCTAACTCCA
AGCCACAAAACCTCGCGTGAGGAATGGTCAGTTAAAGACTTAATAAAATA
TACTTTTTCTATAAAATAACATAATAAATAAAAATAAATTAAAAATATTT
AAAAAAAAAAAAAAAAA

MIP16756.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG33125-RA 3852 CG33125-RA 230..3852 248..3870 18115 100 Plus
CG33125-RA 3852 CG33125-RA 1..170 79..248 850 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2648134..2651831 3950..248 17890 99 Minus
chr2L 23010047 chr2L 2651891..2652138 248..1 1240 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:44 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2648356..2652062 3954..248 18535 100 Minus
2L 23513712 2L 2652122..2652369 248..1 1240 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2648356..2652062 3954..248 18535 100 Minus
2L 23513712 2L 2652122..2652369 248..1 1240 100 Minus
Blast to na_te.dros performed 2019-03-16 05:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Transpac 5249 Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). 1329..1681 1223..1559 139 55.8 Plus

MIP16756.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:15:38 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2651892..2652138 1..247 100   Minus
chr2L 2648201..2651831 248..3883 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-02-17 17:31:31 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RA 1..169 79..247 100 -> Plus
CG33125-RA 230..3852 248..3870 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:30:13 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 1..3792 79..3870 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:16:43 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 1..3792 79..3870 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:00:53 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 1..3792 79..3870 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-02-17 17:31:31 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RA 1..169 79..247 100 -> Plus
CG33125-RA 230..3852 248..3870 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:30:13 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 1..3792 79..3870 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:16:43 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 1..3950 1..3950 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:00:53 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
CG33125-RB 46..3995 1..3950 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2648360..2652062 248..3950 100 <- Minus
2L 2652123..2652369 1..247 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2648360..2652062 248..3950 100 <- Minus
2L 2652123..2652369 1..247 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:15:38 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2648360..2652062 248..3950 100 <- Minus
2L 2652123..2652369 1..247 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:16:43 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2648360..2652062 248..3950 100 <- Minus
arm_2L 2652123..2652369 1..247 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:15:29 Download gff for MIP16756.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2648360..2652062 248..3950 100 <- Minus
2L 2652123..2652369 1..247 100   Minus

MIP16756.pep Sequence

Translation from 78 to 3869

> MIP16756.pep
MSFTLTNQSLIRLESSKDDDEWNRTLMFFNVDISSGVCRDHQNKISQPRS
SVCNGKRRAPGGGLANPITESVMSFVAANKFYAREHSNFDHGNYTPRTSG
RRRDNFAYSDRRRHFYHRPIKSGRSRAAIGLVSPSPSADSTGYYESKRIH
YPDFETGKTFDNFYPDDEPYELEEDEPRRVLSTSDYTKQQEDPRANKEYA
DGRYDYYPHGSRSTNRHHRESKRYNRYPFPEHPAQDDYHRDFRRAVPRQL
RSSSYRMKHNCRQASGSLPPNYASNCYPHDSTEYGSDNDYDGYPENYKKY
RDYYEEPTAEAYQNPYEEFHDYEYPDYKQSSKAPPVPFPKPQPKYYKSYS
KAPSPNYPTNPIFRPEMESKVNEVKVSPYEEAETRQVKSNRIKQNNHSEE
IPRRKGFNYVKKRREEPIKYDKISKHISRLAPHVQYASKGQNDRFTMEVN
PHRERSVSSTHRKIFSEELPHRYRPKKVINETREPHRNLKTKSVGQYDKS
KAQYESYKTRGHHHKSSPDRKKSVDFVRFTDLNDGSEIPHKIRENGQSPS
SIFFTIEIPYKKKHRRYTYPQTGEYISKRSHSGCDNFSQKSFRPQTSLYD
VGKLRKRKTMKQKISGFFKRSKLCLSKSNIFRSKSKIIKKPAQRNLNCAQ
ISNPSPDYSVNSPIASNHSLESENVKVPSQESEHQKYGLKRGKECHYPTV
YRGTNKQLPENNNEIFHQYSMFNVLSSTNQRSKVNNDDYDHFDPGLSKRT
SRYFRPAADSPTKSSYKEFDRVSSGNCSLFSEGKCGDAIGKSEINVCLTI
RTTDVSLTGSPRIVSSKIVGDHGLSSKSNNGEAKITRSRPAIRSVSRQSS
GSTIFESASGENQFKNVRFSPSHFTHNSCSSAQSSSESNSSRIQTSINSQ
EHVCKRKSIEASSKPPEMPGSIGSSSEYLRPRHRLVTKWSLTSQSKPYNS
RPEPSHRWTPDKLDTNSLRPTLFQSDVTKRSSLKRVDDNLVKSVPKRVVL
KTKSSESMISGSMCSSGSSAKSLSTFEIQDKKNDDRSECYRSQSHHFQFG
EDRKIEVFPRKTSSWPRQSPRSFPGPPIRNIDPEPFGKSTLSPKTSTQSL
ESSISRCSSDGLSGNNEGSTSHKPKDMQLVCYPDDDSNLRNSRQSQVEYG
SGFTTMRGLDITESSNRGDLCCPKLVSDLERESFCPKSIVEELKRELLQT
FRAEQQIRSQSPFLRPTPHIMIFPCVPSVMCQTRANINPSPNLFPRPESE
ICWIPNSKPQNLA*

MIP16756.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:22:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13878-PA 117 GF13878-PA 1..58 1..57 155 53.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24502-PA 1282 GG24502-PA 1..1280 1..1261 4753 71.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG33125-PB 1263 CG33125-PB 1..1263 1..1263 6742 100 Plus
CG33125-PC 736 CG33125-PC 1..733 1..733 3971 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26454-PA 1017 GL26454-PA 1..488 1..591 223 24.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17301-PA 1016 GA17301-PA 1..521 1..617 229 24.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:22:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18208-PA 663 GM18208-PA 49..660 656..1263 2466 83.7 Plus
Dsec\GM18208-PA 663 GM18208-PA 1..57 1..56 279 91.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22813-PA 1274 GD22813-PA 1..1271 1..1263 5440 84.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15058-PA 654 GE15058-PA 1..640 610..1263 2261 70.6 Plus

MIP16756.hyp Sequence

Translation from 78 to 3869

> MIP16756.hyp
MSFTLTNQSLIRLESSKDDDEWNRTLMFFNVDISSGVCRDHQNKISQPRS
SVCNGKRRAPGGGLANPITESVMSFVAANKFYAREHSNFDHGNYTPRTSG
RRRDNFAYSDRRRHFYHRPIKSGRSRAAIGLVSPSPSADSTGYYESKRIH
YPDFETGKTFDNFYPDDEPYELEEDEPRRVLSTSDYTKQQEDPRANKEYA
DGRYDYYPHGSRSTNRHHRESKRYNRYPFPEHPAQDDYHRDFRRAVPRQL
RSSSYRMKHNCRQASGSLPPNYASNCYPHDSTEYGSDNDYDGYPENYKKY
RDYYEEPTAEAYQNPYEEFHDYEYPDYKQSSKAPPVPFPKPQPKYYKSYS
KAPSPNYPTNPIFRPEMESKVNEVKVSPYEEAETRQVKSNRIKQNNHSEE
IPRRKGFNYVKKRREEPIKYDKISKHISRLAPHVQYASKGQNDRFTMEVN
PHRERSVSSTHRKIFSEELPHRYRPKKVINETREPHRNLKTKSVGQYDKS
KAQYESYKTRGHHHKSSPDRKKSVDFVRFTDLNDGSEIPHKIRENGQSPS
SIFFTIEIPYKKKHRRYTYPQTGEYISKRSHSGCDNFSQKSFRPQTSLYD
VGKLRKRKTMKQKISGFFKRSKLCLSKSNIFRSKSKIIKKPAQRNLNCAQ
ISNPSPDYSVNSPIASNHSLESENVKVPSQESEHQKYGLKRGKECHYPTV
YRGTNKQLPENNNEIFHQYSMFNVLSSTNQRSKVNNDDYDHFDPGLSKRT
SRYFRPAADSPTKSSYKEFDRVSSGNCSLFSEGKCGDAIGKSEINVCLTI
RTTDVSLTGSPRIVSSKIVGDHGLSSKSNNGEAKITRSRPAIRSVSRQSS
GSTIFESASGENQFKNVRFSPSHFTHNSCSSAQSSSESNSSRIQTSINSQ
EHVCKRKSIEASSKPPEMPGSIGSSSEYLRPRHRLVTKWSLTSQSKPYNS
RPEPSHRWTPDKLDTNSLRPTLFQSDVTKRSSLKRVDDNLVKSVPKRVVL
KTKSSESMISGSMCSSGSSAKSLSTFEIQDKKNDDRSECYRSQSHHFQFG
EDRKIEVFPRKTSSWPRQSPRSFPGPPIRNIDPEPFGKSTLSPKTSTQSL
ESSISRCSSDGLSGNNEGSTSHKPKDMQLVCYPDDDSNLRNSRQSQVEYG
SGFTTMRGLDITESSNRGDLCCPKLVSDLERESFCPKSIVEELKRELLQT
FRAEQQIRSQSPFLRPTPHIMIFPCVPSVMCQTRANINPSPNLFPRPESE
ICWIPNSKPQNLA*

MIP16756.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG33125-PB 1263 CG33125-PB 1..1263 1..1263 6742 100 Plus
CG33125-PC 736 CG33125-PC 1..733 1..733 3971 100 Plus