MIP16783.complete Sequence
584 bp assembled on 2010-01-27
GenBank Submission: BT120234.1
> MIP16783.complete
CGATTAAGATGCGTCACTTTACCGTGCTAGTATCCTGCATCCTGATAGTT
ATATTGCCATGCGTGTTAGGGGCTCACAGGACAGCTCTCAAGAGTCATTA
TAGAAGCTTTGTGAAACCAAAGCAGAATGTCATACGGGCTAGAACCAATC
AAACAACACAACTTACATTAGGAGACTATACGGAAAACTTTTATAAACAC
TGCATGGATATTTTCAAAGAGAAAAACTTGGTTGGTAAAGTGATCCATGG
CATGATCAGTGGAATTTTAGACAGGCTCAATGAAGTGTGCCTCGACAAGC
CCATTCACCCACTTATCCACAAAGTTTTCACGGAAATCCTTCTCTGTGGC
GGAAGCATGTCGGATGCAATCGATAGCGTCATTGACATATTATTTGGAAA
TTTGGAAAGAAATTGCAGGGAGAGGCCTGGATTCAATAGCTATTATATTT
TAACCAGTGCGGAAAACGAAATAGTTGAATCAAAAGGTTAAACAACAATC
TGAGAGCTTATATATTGATGTAACCAAAATAAAATAATTAGGGGTAGCAC
TAATACCTCTTATAAGACAAAAAAAAAAAAAAAA
MIP16783.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-RA | 722 | Sfp84E-RA | 59..628 | 1..570 | 2850 | 100 | Plus |
Os-C.b | 911 | Os-C.b | 769..911 | 570..428 | 715 | 100 | Minus |
Os-C-RC | 956 | Os-C-RC | 814..956 | 570..428 | 715 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:06:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 3805731..3806288 | 568..11 | 2775 | 99.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:06:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7979682..7980241 | 570..11 | 2800 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:37:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 7720513..7721072 | 570..11 | 2800 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 15:06:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Rt1b | 5171 | Rt1b RT1B 5150bp | 3972..4068 | 65..161 | 125 | 58.8 | Plus |
MIP16783.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:06:57 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 3805731..3806291 | 4..568 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-27 19:48:38 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 1..483 | 9..491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:13:06 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 1..483 | 9..491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:02:42 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 1..483 | 9..491 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:27:08 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 1..483 | 9..491 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-27 19:48:38 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 22..589 | 1..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:13:06 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 22..589 | 1..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:02:42 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 22..589 | 1..568 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:27:08 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp84E-RA | 22..589 | 1..568 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:06:57 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7979684..7980244 | 4..568 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:06:57 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7979684..7980244 | 4..568 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:06:57 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7979684..7980244 | 4..568 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:02:42 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3805406..3805966 | 4..568 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:03:50 Download gff for
MIP16783.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7720515..7721075 | 4..568 | 99 | | Minus |
MIP16783.pep Sequence
Translation from 2 to 490
> MIP16783.pep
IKMRHFTVLVSCILIVILPCVLGAHRTALKSHYRSFVKPKQNVIRARTNQ
TTQLTLGDYTENFYKHCMDIFKEKNLVGKVIHGMISGILDRLNEVCLDKP
IHPLIHKVFTEILLCGGSMSDAIDSVIDILFGNLERNCRERPGFNSYYIL
TSAENEIVESKG*
MIP16783.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-PA | 160 | CG42484-PA | 1..160 | 3..162 | 838 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:51:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30261-PA | 137 | GA30261-PA | 48..136 | 63..151 | 155 | 36 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:51:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ11030-PA | 153 | GJ11030-PA | 62..151 | 63..152 | 142 | 32.2 | Plus |
MIP16783.hyp Sequence
Translation from 203 to 490
> MIP16783.hyp
MDIFKEKNLVGKVIHGMISGILDRLNEVCLDKPIHPLIHKVFTEILLCGG
SMSDAIDSVIDILFGNLERNCRERPGFNSYYILTSAENEIVESKG*
MIP16783.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:22:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp84E-PA | 160 | CG42484-PA | 66..160 | 1..95 | 493 | 100 | Plus |