Clone MIP16806 Report

Search the DGRC for MIP16806

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:168
Well:6
Vector:pOT2|pOTB7_DraIII
Protein status:MIP16806.pep: Imported from assembly
Sequenced Size:1401

Clone Sequence Records

MIP16806.complete Sequence

1401 bp assembled on 2010-01-28

GenBank Submission: BT120278.1

> MIP16806.complete
ATTTTCTCATCCAAATGCTGCCGATATTGCTTGGAATTTTTTTTGTGTGG
CTATCGAACAGCACAGCCTTATCTGAGGTGAACTGGAAGAATCACTCGCT
TCACCGCATTCATCATCGCACAAAAGTAATAACTGCGGTGGACATCATAA
GCAGTCACAACTATCCGGTGCAAACACACACTGTGGTCACCAGGGATGGC
TACATACTGTCGGTCTTCCGAATCCCATCATCACAGCTATGTGCAAGTAG
CGAACCAAAGCCAGTTGTTTTGATTAACCATGGCATGACTGGCTCCGCGG
ACTCATGGCTTCTAACTGGACCGCGGAATGGACTGCCCTTTTTGTTGGCC
GATGCTTGTTACGATGTGTGGCTGATAAACTGTCGCGGGACCCGGTACTC
CAGGAAGCATCTCAAACTCAAGGCCTGGCTCTTGCAGTTTTGGCGTTTTA
GCTGGCATGAAATCGGAATGGAGGACTTGCCCGCCACTGTTGACCATATC
CTGGCCTCCACGAAACGGAACTCTTTGCACTATGTGGGTCACTCGCAGGG
ATGCACATCCATGCTGGTGATGCTCAGCATGAGACCGGAGTACAATAAAC
GGATCAGGACCACCATCCTACTGGCCCCGCCCGTCTTCTTGAAACATTCT
CTTTCGATGGGTCATAAGATAATGAAGCCTCTGTTCAACCTCCTGCCGGA
CATTGAGTTGTTGCCCCATCACAAGATGCTGAATTCCGCGGTATCAGCCA
TATGCAAAATTCTTGGCGTGAAGGACGTTTGCACTGCACTGTATCTCCTA
ACCAATGGACGAGTATCCCAGCACATGAACAGGACCCTCATTCCGATGTT
GATTGCCACTCATCCGGCTGGGATTTCTAGCAGGCAGCCGAGACACTTCT
TCCAGCTCAAGGACTCCGGGAGATTCCGACAATACGACTTTGGATTTGGA
ATGAACTATCTTATTTACAGACAAAACACTCCACCGGAATATCCCCTGGA
AATGGTGCGTCCGCACTCCGCCATCCACATCTTCTACAGCGATGACGATG
GAACCATCTCTCCGAGAGACGTCCTAACCCTTGCCAGCAAGTTGCCTTAC
GCAGTCCCCCATCATATCACGGATGAAACCTGGAACCATATGGACTTTCT
TCTAGCTAACAACATAAATGAATTGATTAATAATCCAGTAATCAAGATTA
TCAAGACCTTCGAAGAAAATATTAAGCACAAAATTGGGAATATAAAGGGG
GAAATAAGTATTGATGCACTTTTAAATGAATTTTAATAGTTGGTGAAACA
TAATTGTTTTAAAGAGTGTTGATAAATAATGTATATATTGCTATAATGTC
GCATATTAAAGAGTAGTTAAAGCCAAAAAAAAAAAAAAAAAAAAAAAAAA
A

MIP16806.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:40:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11608.a 1358 CG11608.a 10..1358 3..1351 6730 99.9 Plus
CG11608-RA 1308 CG11608-RA 160..1308 138..1286 5745 100 Plus
CG11608-RA 1308 CG11608-RA 10..86 3..79 385 100 Plus
CG11598-RB 1361 CG11598-RB 486..556 525..595 190 84.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:16:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8464000..8464696 137..833 3470 99.9 Plus
chr3R 27901430 chr3R 8464759..8465298 833..1372 2670 99.6 Plus
chr3R 27901430 chr3R 8463755..8463831 3..79 355 97.4 Plus
chr3R 27901430 chr3R 8463883..8463946 76..139 320 100 Plus
chr3R 27901430 chr3R 8460601..8460755 441..595 235 76.8 Plus
chr3R 27901430 chr3R 8462304..8462455 441..592 220 76.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:20:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12638735..12639431 137..833 3485 100 Plus
3R 32079331 3R 12639494..12640033 833..1372 2685 99.8 Plus
3R 32079331 3R 12638490..12638566 3..79 385 100 Plus
3R 32079331 3R 12638618..12638681 76..139 320 100 Plus
3R 32079331 3R 12635338..12635492 441..595 235 76.8 Plus
3R 32079331 3R 12637039..12637190 441..592 220 76.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:37:55
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12379566..12380262 137..833 3485 100 Plus
3R 31820162 3R 12380325..12380864 833..1372 2685 99.8 Plus
3R 31820162 3R 12379321..12379397 3..79 385 100 Plus
3R 31820162 3R 12379449..12379512 76..139 320 100 Plus
3R 31820162 3R 12376253..12376323 525..595 190 84.5 Plus
3R 31820162 3R 12377870..12377915 441..486 170 91.3 Plus
3R 31820162 3R 12374701..12374767 526..592 170 83.5 Plus
Blast to na_te.dros performed 2019-03-16 18:16:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_M 2935 Dbif\P-element_M P_M 2935bp Derived from X60990. 1951..2094 1213..1356 152 58.9 Plus
FB 1106 FB DMTNFB 1106bp AKA(J01084) Derived from V00246 (g8708) (Rel. 36, Last updated, Version 3). 797..838 1309..1268 120 76.2 Minus

MIP16806.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:17:05 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8463754..8463829 1..77 96 -> Plus
chr3R 8463885..8463944 78..137 100 -> Plus
chr3R 8464001..8464696 138..833 99 -> Plus
chr3R 8464760..8465298 834..1374 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-28 18:25:12 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RA 160..1308 138..1286 100   Plus
CG11608-RA 9..84 1..77 98 -> Plus
CG11608-RA 140..159 78..97 100 == Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:14:28 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1293 1..1286 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:18:02 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1293 1..1286 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:36:25 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1293 1..1286 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-28 18:25:10 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RA 9..84 1..77 98 -> Plus
CG11608-RA 140..159 78..97 100 == Plus
CG11608-RA 160..1308 138..1286 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:14:28 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1293 1..1286 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:18:02 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1379 1..1372 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:36:25 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
CG11608-RB 9..1379 1..1372 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:17:05 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12638620..12638679 78..137 100 -> Plus
3R 12638489..12638564 1..77 98 -> Plus
3R 12638736..12639431 138..833 100 -> Plus
3R 12639495..12640033 834..1374 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:17:05 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12638620..12638679 78..137 100 -> Plus
3R 12638489..12638564 1..77 98 -> Plus
3R 12638736..12639431 138..833 100 -> Plus
3R 12639495..12640033 834..1374 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:17:05 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12638620..12638679 78..137 100 -> Plus
3R 12638489..12638564 1..77 98 -> Plus
3R 12638736..12639431 138..833 100 -> Plus
3R 12639495..12640033 834..1374 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:18:02 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8464211..8464286 1..77 98 -> Plus
arm_3R 8464342..8464401 78..137 100 -> Plus
arm_3R 8464458..8465153 138..833 100 -> Plus
arm_3R 8465217..8465755 834..1374 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:04:49 Download gff for MIP16806.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12379567..12380262 138..833 100 -> Plus
3R 12380326..12380864 834..1374 99   Plus
3R 12379320..12379395 1..77 98 -> Plus
3R 12379451..12379510 78..137 100 -> Plus

MIP16806.hyp Sequence

Translation from 0 to 1285

> MIP16806.hyp
FLIQMLPILLGIFFVWLSNSTALSEVNWKNHSLHRIHHRTKVITAVDIIS
SHNYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSAD
SWLLTGPRNGLPFLLADACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFS
WHEIGMEDLPATVDHILASTKRNSLHYVGHSQGCTSMLVMLSMRPEYNKR
IRTTILLAPPVFLKHSLSMGHKIMKPLFNLLPDIELLPHHKMLNSAVSAI
CKILGVKDVCTALYLLTNGRVSQHMNRTLIPMLIATHPAGISSRQPRHFF
QLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIHIFYSDDDG
TISPRDVLTLASKLPYAVPHHITDETWNHMDFLLANNINELINNPVIKII
KTFEENIKHKIGNIKGEISIDALLNEF*

MIP16806.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG11608-PB 430 CG11608-PB 4..430 1..427 2273 100 Plus
CG18530-PA 389 CG18530-PA 19..386 43..410 1091 53 Plus
CG11598-PB 388 CG11598-PB 17..380 41..404 1048 49.5 Plus
CG11600-PB 406 CG11600-PB 1..402 5..404 1023 48.5 Plus
mag-PA 399 CG5932-PA 27..397 40..404 742 40.3 Plus

MIP16806.pep Sequence

Translation from 2 to 1285

> MIP16806.pep
FLIQMLPILLGIFFVWLSNSTALSEVNWKNHSLHRIHHRTKVITAVDIIS
SHNYPVQTHTVVTRDGYILSVFRIPSSQLCASSEPKPVVLINHGMTGSAD
SWLLTGPRNGLPFLLADACYDVWLINCRGTRYSRKHLKLKAWLLQFWRFS
WHEIGMEDLPATVDHILASTKRNSLHYVGHSQGCTSMLVMLSMRPEYNKR
IRTTILLAPPVFLKHSLSMGHKIMKPLFNLLPDIELLPHHKMLNSAVSAI
CKILGVKDVCTALYLLTNGRVSQHMNRTLIPMLIATHPAGISSRQPRHFF
QLKDSGRFRQYDFGFGMNYLIYRQNTPPEYPLEMVRPHSAIHIFYSDDDG
TISPRDVLTLASKLPYAVPHHITDETWNHMDFLLANNINELINNPVIKII
KTFEENIKHKIGNIKGEISIDALLNEF*

MIP16806.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17111-PA 962 GF17111-PA 544..921 46..413 857 41.8 Plus
Dana\GF10345-PA 399 GF10345-PA 27..397 40..404 766 41.9 Plus
Dana\GF16784-PA 423 GF16784-PA 48..418 43..405 745 40 Plus
Dana\GF16783-PA 425 GF16783-PA 46..425 40..408 711 39.1 Plus
Dana\GF19577-PA 381 GF19577-PA 2..373 51..405 694 39 Plus
Dana\GF17111-PA 962 GF17111-PA 1..307 42..349 585 39.8 Plus
Dana\GF17111-PA 962 GF17111-PA 292..542 27..276 548 45.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19115-PA 433 GG19115-PA 4..433 1..427 1698 71.6 Plus
Dere\GG19093-PA 383 GG19093-PA 19..383 43..409 1119 52.9 Plus
Dere\GG19104-PA 386 GG19104-PA 21..380 27..404 918 47.1 Plus
Dere\GG16116-PA 399 GG16116-PA 27..397 40..404 753 40.3 Plus
Dere\GG24941-PA 406 GG24941-PA 31..405 41..405 737 41.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:57:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23213-PA 422 GH23213-PA 48..419 41..405 755 39.4 Plus
Dgri\GH23215-PA 564 GH23215-PA 48..434 41..419 755 40.3 Plus
Dgri\GH19444-PA 424 GH19444-PA 51..422 44..408 744 41.3 Plus
Dgri\GH14550-PA 401 GH14550-PA 27..399 41..404 726 39.5 Plus
Dgri\GH19443-PA 418 GH19443-PA 52..418 49..411 718 40.5 Plus
Dgri\GH23215-PA 564 GH23215-PA 440..564 284..411 257 40.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11608-PB 430 CG11608-PB 4..430 1..427 2273 100 Plus
CG18530-PA 389 CG18530-PA 19..386 43..410 1091 53 Plus
CG11598-PB 388 CG11598-PB 17..380 41..404 1048 49.5 Plus
CG11600-PB 406 CG11600-PB 1..402 5..404 1023 48.5 Plus
CG3635-PB 425 CG3635-PB 55..421 49..406 743 42.3 Plus
mag-PA 399 CG5932-PA 27..397 40..404 742 40.3 Plus
CG2772-PA 416 CG2772-PA 34..408 44..404 731 41.4 Plus
CG31089-PA 421 CG31089-PA 46..415 43..404 730 41 Plus
CG31091-PC 424 CG31091-PC 56..422 46..404 699 39.9 Plus
CG31091-PB 424 CG31091-PB 56..422 46..404 699 39.9 Plus
CG8093-PB 398 CG8093-PB 25..395 39..400 664 39.3 Plus
CG8093-PA 398 CG8093-PA 25..395 39..400 664 39.3 Plus
Lip4-PA 434 CG6113-PA 69..433 43..407 645 37.4 Plus
Lip4-PC 448 CG6113-PC 83..447 43..407 645 37.4 Plus
Lip4-PB 432 CG6113-PB 69..431 43..407 641 37.4 Plus
CG31871-PA 531 CG31871-PA 82..454 48..420 620 34.2 Plus
CG6753-PB 405 CG6753-PB 32..402 42..405 604 36.6 Plus
CG18301-PA 422 CG18301-PA 44..401 43..402 602 33.9 Plus
Lip1-PB 439 CG7279-PB 71..432 48..418 589 34.5 Plus
Lip1-PA 439 CG7279-PA 71..432 48..418 589 34.5 Plus
CG7329-PB 457 CG7329-PB 40..390 43..404 589 35.3 Plus
CG7329-PA 457 CG7329-PA 40..390 43..404 589 35.3 Plus
Lip3-PA 394 CG8823-PA 32..394 49..404 587 34.5 Plus
CG11406-PB 396 CG11406-PB 36..384 57..398 572 39.3 Plus
CG11406-PA 326 CG11406-PA 2..314 93..398 523 39.7 Plus
CG18302-PA 406 CG18302-PA 45..399 47..401 520 33.7 Plus
CG31872-PB 1073 CG31872-PB 719..1069 48..399 517 35 Plus
CG31872-PA 1073 CG31872-PA 719..1069 48..399 517 35 Plus
CG18284-PB 457 CG18284-PB 102..452 48..399 516 35.3 Plus
CG18284-PC 457 CG18284-PC 102..452 48..399 516 35.3 Plus
CG17097-PB 1087 CG17097-PB 724..1083 43..402 512 33.2 Plus
CG3635-PC 301 CG3635-PC 55..294 49..277 453 40.4 Plus
Lip2-PA 413 CG17116-PA 35..403 44..403 378 28.1 Plus
Lip2-PB 377 CG17116-PB 1..367 46..403 373 28 Plus
CG11406-PD 266 CG11406-PD 2..154 93..238 357 49.7 Plus
CG11406-PC 266 CG11406-PC 2..154 93..238 357 49.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:57:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24674-PA 420 GI24674-PA 51..419 44..405 758 41.6 Plus
Dmoj\GI16796-PA 408 GI16796-PA 33..404 41..405 721 40.5 Plus
Dmoj\GI13397-PA 401 GI13397-PA 28..399 42..404 719 40.1 Plus
Dmoj\GI20075-PA 407 GI20075-PA 31..398 48..404 710 39.7 Plus
Dmoj\GI22981-PA 422 GI22981-PA 56..421 47..408 696 40 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27144-PA 396 GL27144-PA 26..389 47..408 845 46.7 Plus
Dper\GL27143-PA 396 GL27143-PA 26..390 47..409 844 46.2 Plus
Dper\GL22025-PA 425 GL22025-PA 50..420 43..405 776 40.8 Plus
Dper\GL21801-PA 422 GL21801-PA 50..418 43..406 742 39.7 Plus
Dper\GL12789-PA 399 GL12789-PA 27..397 40..404 736 39.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:57:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14975-PA 367 GA14975-PA 2..360 52..408 834 47.1 Plus
Dpse\GA22417-PA 363 GA22417-PA 2..360 52..408 827 46.1 Plus
Dpse\GA11091-PA 378 GA11091-PA 17..375 47..406 819 44 Plus
Dpse\GA15999-PA 425 GA15999-PA 50..420 43..405 775 40.9 Plus
Dpse\GA17576-PA 470 GA17576-PA 47..467 9..412 746 39.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24052-PA 430 GM24052-PA 4..430 1..427 2137 92.3 Plus
Dsec\GM24047-PA 391 GM24047-PA 14..383 38..407 1108 53 Plus
Dsec\GM24049-PA 388 GM24049-PA 17..381 41..405 1068 49.3 Plus
Dsec\GM24050-PA 475 GM24050-PA 1..347 5..369 845 46.8 Plus
Dsec\GM10277-PA 421 GM10277-PA 43..415 39..404 747 41.1 Plus
Dsec\GM24050-PA 475 GM24050-PA 357..469 167..279 286 40.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18851-PA 435 GD18851-PA 4..435 1..427 2000 87 Plus
Dsim\GD18847-PA 391 GD18847-PA 19..383 43..407 1121 53.7 Plus
Dsim\GD18848-PA 388 GD18848-PA 17..381 41..405 1082 49.9 Plus
Dsim\GD18849-PA 370 GD18849-PA 18..368 38..404 887 46.9 Plus
Dsim\GD14888-PA 399 GD14888-PA 27..397 40..404 763 41.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23893-PA 424 GJ23893-PA 51..422 44..408 764 42.9 Plus
Dvir\GJ23892-PA 421 GJ23892-PA 50..420 44..407 734 40.8 Plus
Dvir\GJ24675-PA 422 GJ24675-PA 56..419 47..404 730 39.8 Plus
Dvir\GJ11522-PA 401 GJ11522-PA 28..399 42..404 724 40.6 Plus
Dvir\GJ13469-PA 405 GJ13469-PA 27..402 43..412 713 39.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24189-PA 451 GK24189-PA 75..448 48..412 749 41.8 Plus
Dwil\GK12870-PA 427 GK12870-PA 49..426 44..411 741 40.1 Plus
Dwil\GK12291-PA 406 GK12291-PA 1..406 5..404 733 37.8 Plus
Dwil\GK15530-PA 410 GK15530-PA 34..410 42..410 729 41.4 Plus
Dwil\GK12869-PA 431 GK12869-PA 56..427 43..404 722 39.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26210-PA 435 GE26210-PA 4..435 1..427 1657 69.6 Plus
Dyak\GE26208-PA 388 GE26208-PA 19..381 43..405 1126 53.4 Plus
Dyak\GE26209-PA 387 GE26209-PA 3..381 10..404 912 45.1 Plus
Dyak\GE19683-PA 399 GE19683-PA 27..397 40..404 760 40.5 Plus
Dyak\GE12963-PA 388 GE12963-PA 23..388 49..407 752 42.7 Plus