Clone MIP17035 Report

Search the DGRC for MIP17035

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:170
Well:35
Vector:pOT2|pOTB7_DraIII
Associated Gene/Transcriptpod1-RG
Protein status:MIP17035.pep: gold
Sequenced Size:6379

Clone Sequence Records

MIP17035.complete Sequence

6379 bp assembled on 2010-06-03

GenBank Submission: BT124988.1

> MIP17035.complete
AGACGATGACAAAACGTTTGAAAAAAAGTTGAAGATCTCTCGCGTAGTTT
ATTGATTGCATTGAAACGAAACTCTGAAACGGAGCAGCGGAGCGGAGAGC
GAAGCGCAAGAGAGCGACTGAGAGGGAGCCACCGGACTAGTGACACTCGA
CCATCAGGCATCAAGCATCGGGCATATACAATCCACAATCGACTCTCTAC
ACTCGAGCAGAGAACGTCCATATCCATATCCACATCCGCATCGGATCGCC
ATCACATCGGATCGAAGCCCTCCCAGCTCAACCAAGTAGCCAACCATGGC
CTGGCGATTCAAGGCTTCCAAGTACAAAAATGCCGCACCCATTGTGCCCA
AGGCGGAGGCATGCGTCCGCGAGATCTGCGTGGGCAGCTACCAGACGTAC
GGTAACAACATCGCCGCCTCCGGCGCCTTCATGGCCTTCAACTGGGAGCA
CACCGGGTCCAGCGTCGCTGTCCTCCCGCTGGACGACTGCGGCCGGAAGA
GCAAGACCATGCCGCTGCTCCATGGACACACGGACACAGTGACGGACCTT
AAGTTCTCCCCGTTCCACGACGGGCTGCTGGCCACCGCCTCGCAGGATTG
CCTGGTCAAGATCTGGCACATACCGGAAAAAGGTCTGGAGCAGTCGCTTT
CCGATCCGGAGGCAATCTTCTCACACAAGCAGAGACGCGTAGAGACAGTG
GGCTTCCATCCAACAGCAGATGGTTTGATGTACTCCACAGCCGCCGGCTG
CGTGGCTCTCTTCGATCTCAGCACTCAAAAGGAGATATTCTCGAACAATG
AGCACCCCGAGGTGATACAGTCGGCCAGTTGGCGCGAGGACGGTTCTGTT
TTGGCCACCAGTTGCAAGGATAAGAATGTGCGAATCTTCGATCCCCGTGC
CGCTGGTTCACCCATCCAGCTGACTGCTGAATCGCATCAGAGCATCAAGG
ATTCGCGGGTGGTGTGGTTAGGCAATCAGCATCGCATCCTGACCACTGGC
TTCGATGCGGCCCGCCTGCGACAGGTGATCATCCGTGATGTGCGCAACTT
CAACACTCCAGAGAAAACTCTCGAACTGGACTGCTCGACGGGCATATTGA
TGCCCCTCTTCGATCCCGACACCAATATGCTTTTCCTAGCCGGAAAGGGT
GACACAACCATTAACTATTTGGAGATTACGGACAAGGATCCGTATTTGAT
TGAGGGCTTGCGTCATACTGGCGAGCAGACGAAGGGAGCTTGTCTCGTGC
CCAAGCGGGCACTTAAAGTCATGGAAGCAGAGGTTAACCGGGTGTTGCAA
TTGACCTCCAACATGGTCATACCCATCATGTACCAGGTGCCCAGAAAGAC
ATACCGTGATTTCCACGCCGATCTATATCCGGAGACCACTGGCTACAAGA
CAGAACTGGTGGCCGGCGAGTGGCTAAATGGCAGCAACCAGGCGGTGCCC
AAGATGAGCCTTGATCCCGCCAAGCGTGAGCATGGCGATGAGCCAATTAT
TATTCATCGCGGTAACCTGAGTGATTTTGTTAAGAACCTGGAGAATCAGC
GGGCCAAGAGCAACACCACTGGGAAACCCAATCAGCAGGCCAAGCGCAAC
GATAACGAGCACTTTGTCATGCTAAACACGGGCAATAACTTTGAGGAGAA
GAACGGCAATGACAACAGCAACGAGAGCAACGGAAAGAAGAGCACACCTT
CACAGTCCCAGCCAGATGGCGAGTGCAGTGAGCTCATCCGTAAGTTCGAG
GCAAAATACAAGGTGGATTCGGAGAAGGAAAAGGCCCATGCCTACGCCCA
GTCTCACGAGGATGACAAGGAGTCACCCACTGAGCACGAGCATTCGACCG
GCAGCAGCGAGGAGGTCTCCTCCTCCGGTGGACTGGACAACCATTCGGCC
AGTGGCAGCCACTCGCCACCGAAGCCCATGCCGCGCACATCGCGCAGCAA
TTCCCTTCCGGAGGCCAGTGATTCCGCTGGGGAAAGCAGCAGCACCAACA
CGCCGCGCCCGAGGCCTCGCACCACCGCTGCGTCTGCATACAAGCCACGT
TTGGGTCCCAAGCCCTTCTCCAGCACCACAGGTGACGTTTCGTTTGACAA
GGTGTTCGCCGTTCCCTTGGCACCGGGATCCCACGAGAATATCTCGAACG
TGGGTCAGGACAGCGGAGTGGAGATGACACCAGCTCAGGGAGCCAAACCG
GATCTCATTGTGGAAATCGAAATTAAAAAGAAACACGAAAGGGAACCTGC
TGTGTCCGGAAATGGAGTCCAGAAGTCACTGACCACTTCGGAGCGCCGTA
AGTCCTCGGCTGACGATGATGAATCATCCGACAAGATATTCGAGCAGAAC
TCTGAGTCATCGGAGAACTCGACGGAGGGGGAAGATCGCACGGATGCGGA
TCTGCGAAGAAACTGCACCTCCAGGAGCAGCTTTGCCGAGCGACGGCGCA
TATACGAGAATCGTTCCAAGAGTCAGGTGGACGAGAAGCCTCAGTCGCCA
GTGCCATTACGTCGCGAGCACTCCAAAGTGGAGCCGCTGAAGCCCAACCA
ACAGCAGCAGCAGCAGGGCAATGTGATCGACACCAAGCGCATCTCTGTTC
CAGAGGGCAAATTAATGGAGGAGCATCGCCGCGGAAATGGCGCTGGACTC
AAGAAGTCCGCCACTGAGGCGGCTTTTAGCGCTGCCAGCACCAAGCGCAC
TTCCACCGTCTTCGGCAAGGTGTCCAAGTTCAGGCACTTGAAGGGCACAC
CCGGTCACAAGTCCACGCACATCGAGAACTTGCGCAATCTAAGTCGCCAG
ATTCCGGGCGAATGCAATGGCTTCCACGCTAACCAGGAGCGAGTTGCCGT
GCCACTTTCGGGGCCCGGCGGCAAGATAGCCATCTTTGAGTTGAGCCGCC
CTGGACGGTTGCCCGATGGTGTGATTCCGTCACTTGTGAACGGCAGCAAC
ATCATGGACTTCCAGTGGGATCCGTTCGATGCCCAGCGATTGGCTGTGGC
ATGCGACGATGGCATTGTAAAGATCTGGCATATTGAAGCCGGTGGATTGA
GTGAGCCGACAAACACACCTGCCGGCGAGCTAACCGCTCATCTGGACAAG
ATTTACTTCATACGCTTCCACCCGCTGGCTGCTGATGTTCTGTTAACCGC
CAGCTACGATATGACCATCAAGCTGTGGGATTTGCGCACCATGACCGAGA
AATGCTCGCTTTCGGGGCATACAGATCAAATCTTTGACTTCGCCTGGAGT
CCCTGCGGCCGATTGGGCGCCACCGTGTGCAAGGATGGCAAGATTAGGGT
GTACAACCCAAGGAAATCGGAGACACCCATACGGGAGGGCAATGGACCGG
TCGGTACTCGTGGAGCTCGGATCACCTGGGCGTTGGAGGGACATTACATC
GTCTGCACTGGTTTTGACAAGGTTTCGGAGCGACAGATCAGCGTGTACAA
TGCACAAAAGTTGTCCGCCCCATTGAACACTGCCAGTTTGGATGTCTCAC
CCTCCATACTGATTCCATTCTATGACGAAGATAGCTCCACACTGTTTGTT
ACGGGCAAGGGTGACTCCACAATCTACTGTTACGAAATCACCGACGAGGA
GCCGTACATCTGCCCACTGTCGCACCATCGTTGCACCTCGCTGCACCAGG
GCCTCAGTTTCCTCACCAAGAACCACTGCGACGTGGCCAGCGTGGAGTTC
TCAAAGGCCTATCGGCTAACCAATACCACAATTGAACCCCTGAGTTTCAC
AGTGCCCCGCATCAAGAGCGAGCTGTTCCAAGACGATCTGTTCCCACCCA
CACGCATCACCTGGAGCGCCACACTGAGCTCCGAGGATTGGTTCGCTAGC
AATGATAAGGCGGCACCCAAAGTCAGCCTCAAGCCCGAGGGCATGGAAAC
TTTATCTTCCATACAGCAAGTGCCAGCGCAGCCCGTCAAGAAGCCAGATC
ATCCCCAGTTCGGTGGCCAGAAGTCCGAGTACGAGATCAACAAACAGCAG
GAGATCCAGAAATCGGTTAGCGCGCGCATGGAATTCACCACCAAGCTGGA
GCAGGACGACATGGAGGGTGTGGATGAGAACGAGTGGCAGGAGTAGCAGT
ATAGCCAACGTCTGCGGCGGACATGAACCATGGAAATCAGTTCACAATTT
AGCGTTTAACAACCAATGGGCGTAACTTTTTTTTTAACAATCTAAACATG
ACACGACATCATGACGACAACAGCAAGGTGCTCGATATCTACAATCTACT
TGGGAGCGAGCGTATATAGAGAACTCGTAGCTAAGCCGAAAGTTAAACTA
ACACACTCCCGTACACACACCCTCATCCCTTGTCCCTCGTCAACCCAGGA
TTCAGTTCCTCCTCAGCTCCTTCGCCAATAACTGCAGTTGCTCAATAATT
GCCAAATTAATCTTCGTAAGCCAGTTTTGTTCGTTTTGTTAAACGTTTTT
ATATTTGTGTATGTCCTTTTTTTTATTTTGTTTAATTGTGTGTGTTTTAA
CTTTTGATTTACCCATACATATATGTTCGTGTTTTTTGTGTGCTATTTAA
GTAGTTAGTCCAAAATTAGTTTAGCCTATTTAGGTGTTTACACTTACGAA
TAATTTCACCGGTTCTCCTATGTCCTTCAGTTTATGTGGCCATATAGGAA
AAGTGAGGAGAAGGACTTAGATGATACTGCTTTTACATATACGCAAAATG
TATTTCCCTCTCTGTTTGTTTCACGTTTGCATGCGAGTGAGTGAGAGAGA
TAGAGTGTGTGTGTGTGCTTGACTATCACCTTTTTTTTCGCAATATTTCA
CCCTCTTTCTACCTATACCATCATCCATCCATCTATCCGAAATGAAAAAC
CCACCCAAATCGAACCGATGATGCCGCCCCAACCCCCACCATTGTTTCTA
GTCTTTCGCATCGTTCGATCCCCCAAATGAAGACCCCCTCCCCTTATCCT
TATGACCCAACCAACAACTAGACAGGAAACAAAAACATATAGACTGTAGC
CAAACGAAAAATTTAATATATTGCTGAGAACTACAATCAAGCGAGACAAT
TTTTATACTGAAAAATGCGTAAATCAAACAAACTGCAACAGCCGAATCAA
ACCGCAAAGACATGCAAACAACACAATTCCAAAATGTATAACGAAAAGAC
TTGATCAGCGGATGGGTCAGTTGCCCAGCTGCCGCCCATCTCCATCCTTA
GAATCCCTCTTCCCCAAAATGCCCCCTACTAACGCAAAAGAAAAGGTACG
AGATGCCAATGAGAACGGATAGGGGGAAAGTAATGAAAGTTGCCATTGAA
ACGCGAGCGAGGGAAGGCAATAGATCGTATCTCGAGTAGCATAACCCATA
GGCAATAACGTTTTGTACTTGCAATAGAATATACATTTACACATATACAT
GATATATTGATATATGATATATTTTGTATACCAAGCGTATAACTATAAAT
GCTGGCCAAGAACAAGAACTCGAACTTTTGGCTCGAACGACTGAACCATA
GCGCGTGGCAAATCGAAATTCAAAAACTCAAACTCAAATATTTCAAAACA
GACCAACAAACCAACAAAATTCTCGGGTACCGGGCAATATTGTGCTAGAC
AAGGTTCTATTATACAGATTATATATACACATACCATACGCATAGTTATA
TAGGCAAACTGAAGCAATTCCAGCAATTCCAAAATCAAAGTCCAAACTGC
ATTTAATTAATACAAACGCCATGGAACGACTGACAGACAAGTATTCGCTA
AACATTCTGATCCAAATCTGCCCGGCCCGTCAAAAAGTGTTCCACAGCAC
GAGTAGAATTGATCTGGGATCGATTGGGATCTCGGGATCGGGGTAGCGGG
AACACAGTTCTATAAGCATATAATCCTACGGCCCAGTAAACCCAATCCAA
ATTCAATACTAAGCCCGCAGATATTATGTCATTCTGTATTTATTAGCCAT
ATTCGATTACGATTTTCGAACGTCTCTTATTTATATTTATATATATCTAT
AACAATACCAATATACGAAAATACAACTTCAAGCGATATATAATACGATG
ATAAGCGAATGAAGGATTGATTGATTGATTGATGATGATGATGATGATAT
GGTGATGATTCACAGCGGAAGTGCAAGCAGAAAGTAGTGAGGATGGTTTA
TGAAAGCAAATAAGCTGAATCGGAATCAGAATCTGATCTGAATCAGAAGC
ATACACATTATTTATACAATTTATTTTACAGTACGAGTATATCCGATAAT
CCCCATCCGATACTCTAGCACTAAGTTATAATTACAATAATAATAATGAA
GGCAAAAATATATTTATATACATAATTCAATAAAAAAAAACAAAAAGAAA
TTATAAAAAAAAAAAAAAAAAAAAAAAAA

MIP17035.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:39:57
Subject Length Description Subject Range Query Range Score Percent Strand
pod1.b 5829 pod1.b 1535..5829 2045..6339 21475 100 Plus
pod1-RF 6341 pod1-RF 2333..6341 2333..6341 20045 100 Plus
pod1-RA 5801 pod1-RA 1793..5801 2333..6341 20045 100 Plus
pod1-RF 6341 pod1-RF 34..2335 1..2302 11510 100 Plus
pod1.b 5829 pod1.b 34..1534 1..1501 7505 100 Plus
pod1-RA 5801 pod1-RA 37..1537 1..1501 7505 100 Plus
pod1-RA 5801 pod1-RA 1538..1795 2045..2302 1290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 6703632..6705988 4002..6354 11375 99.2 Plus
chrX 22417052 chrX 6701888..6702794 2509..3421 4290 98.2 Plus
chrX 22417052 chrX 6699036..6699592 792..1348 2755 99.6 Plus
chrX 22417052 chrX 6697828..6698371 63..606 2705 99.8 Plus
chrX 22417052 chrX 6699955..6700497 1502..2044 2640 99.1 Plus
chrX 22417052 chrX 6702857..6703202 3421..3766 1715 99.7 Plus
chrX 22417052 chrX 6698769..6698956 604..791 925 99.5 Plus
chrX 22417052 chrX 6700971..6701156 2043..2228 915 99.5 Plus
chrX 22417052 chrX 6701644..6701818 2334..2508 860 99.4 Plus
chrX 22417052 chrX 6699649..6699803 1347..1501 775 100 Plus
chrX 22417052 chrX 6703269..6703406 3765..3902 675 99.3 Plus
chrX 22417052 chrX 6703471..6703571 3903..4003 505 100 Plus
chrX 22417052 chrX 6701225..6701298 2229..2302 370 100 Plus
chrX 22417052 chrX 6695852..6695914 1..63 315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:04:27
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6811478..6813831 4002..6355 11770 100 Plus
X 23542271 X 6809727..6810639 2509..3421 4565 100 Plus
X 23542271 X 6806881..6807437 792..1348 2785 100 Plus
X 23542271 X 6805677..6806220 63..606 2720 100 Plus
X 23542271 X 6807799..6808341 1502..2044 2715 100 Plus
X 23542271 X 6810702..6811047 3421..3766 1730 100 Plus
X 23542271 X 6806617..6806804 604..791 940 100 Plus
X 23542271 X 6808810..6808995 2043..2228 930 100 Plus
X 23542271 X 6809483..6809657 2334..2508 875 100 Plus
X 23542271 X 6807494..6807648 1347..1501 775 100 Plus
X 23542271 X 6811115..6811252 3765..3902 690 100 Plus
X 23542271 X 6811317..6811417 3903..4003 505 100 Plus
X 23542271 X 6809064..6809137 2229..2302 370 100 Plus
X 23542271 X 6803704..6803766 1..63 315 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:56:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 6819576..6821929 4002..6355 11770 100 Plus
X 23527363 X 6817825..6818737 2509..3421 4565 100 Plus
X 23527363 X 6814979..6815535 792..1348 2785 100 Plus
X 23527363 X 6813775..6814318 63..606 2720 100 Plus
X 23527363 X 6815897..6816439 1502..2044 2715 100 Plus
X 23527363 X 6818800..6819145 3421..3766 1730 100 Plus
X 23527363 X 6814715..6814902 604..791 940 100 Plus
X 23527363 X 6816908..6817093 2043..2228 930 100 Plus
X 23527363 X 6817581..6817755 2334..2508 875 100 Plus
X 23527363 X 6815592..6815746 1347..1501 775 100 Plus
X 23527363 X 6819213..6819350 3765..3902 690 100 Plus
X 23527363 X 6819415..6819515 3903..4003 505 100 Plus
X 23527363 X 6817162..6817235 2229..2302 370 100 Plus
X 23527363 X 6811802..6811864 1..63 315 100 Plus
X 23527363 X 6817470..6817504 2301..2335 175 100 Plus
Blast to na_te.dros performed on 2019-03-16 09:04:27 has no hits.

MIP17035.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:05:28 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 6695852..6695914 1..63 100 -> Plus
chrX 6697829..6698369 64..604 99 -> Plus
chrX 6698770..6698956 605..791 99 -> Plus
chrX 6699036..6699592 792..1348 99 -> Plus
chrX 6699651..6699803 1349..1501 100 -> Plus
chrX 6699955..6700497 1502..2044 99 -> Plus
chrX 6700973..6701156 2045..2228 99 -> Plus
chrX 6701225..6701298 2229..2302 100 -> Plus
chrX 6701535..6701567 2303..2335 100 -> Plus
chrX 6701646..6701818 2336..2508 99 -> Plus
chrX 6701888..6702793 2509..3420 98 -> Plus
chrX 6702857..6703202 3421..3766 99 -> Plus
chrX 6703271..6703406 3767..3902 99 -> Plus
chrX 6703471..6703571 3903..4003 100 -> Plus
chrX 6703634..6705965 4004..6331 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:26:30 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RF 1..2007 296..2302 100 == Plus
pod1-RF 2008..3768 2336..4096 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 22:00:48 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RF 1..2007 296..2302 100 == Plus
pod1-RF 2008..3768 2336..4096 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:35:49 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 1..3801 296..4096 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:58:22 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 1..3801 296..4096 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:26:29 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RC 18..1460 59..1501 99 == Plus
pod1-RC 1712..5428 2328..6045 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 22:00:48 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RC 18..1460 59..1501 99 == Plus
pod1-RC 1712..5428 2328..6045 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:35:49 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 21..6351 1..6331 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:58:22 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
pod1-RG 21..6351 1..6331 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:28 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
X 6803704..6803766 1..63 100 -> Plus
X 6805678..6806218 64..604 100 -> Plus
X 6806618..6806804 605..791 100 -> Plus
X 6806881..6807437 792..1348 100 -> Plus
X 6807496..6807648 1349..1501 100 -> Plus
X 6807799..6808341 1502..2044 100 -> Plus
X 6808812..6808995 2045..2228 100 -> Plus
X 6809064..6809137 2229..2302 100 -> Plus
X 6809374..6809406 2303..2335 100 -> Plus
X 6809485..6809657 2336..2508 100 -> Plus
X 6809727..6810638 2509..3420 100 -> Plus
X 6810702..6811047 3421..3766 100 -> Plus
X 6811117..6811252 3767..3902 100 -> Plus
X 6811317..6811417 3903..4003 100 -> Plus
X 6811480..6813807 4004..6331 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:28 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
X 6803704..6803766 1..63 100 -> Plus
X 6805678..6806218 64..604 100 -> Plus
X 6806618..6806804 605..791 100 -> Plus
X 6806881..6807437 792..1348 100 -> Plus
X 6807496..6807648 1349..1501 100 -> Plus
X 6807799..6808341 1502..2044 100 -> Plus
X 6808812..6808995 2045..2228 100 -> Plus
X 6809064..6809137 2229..2302 100 -> Plus
X 6809374..6809406 2303..2335 100 -> Plus
X 6809485..6809657 2336..2508 100 -> Plus
X 6809727..6810638 2509..3420 100 -> Plus
X 6810702..6811047 3421..3766 100 -> Plus
X 6811117..6811252 3767..3902 100 -> Plus
X 6811317..6811417 3903..4003 100 -> Plus
X 6811480..6813807 4004..6331 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:05:28 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
X 6803704..6803766 1..63 100 -> Plus
X 6805678..6806218 64..604 100 -> Plus
X 6806618..6806804 605..791 100 -> Plus
X 6806881..6807437 792..1348 100 -> Plus
X 6807496..6807648 1349..1501 100 -> Plus
X 6807799..6808341 1502..2044 100 -> Plus
X 6808812..6808995 2045..2228 100 -> Plus
X 6809064..6809137 2229..2302 100 -> Plus
X 6809374..6809406 2303..2335 100 -> Plus
X 6809485..6809657 2336..2508 100 -> Plus
X 6809727..6810638 2509..3420 100 -> Plus
X 6810702..6811047 3421..3766 100 -> Plus
X 6811117..6811252 3767..3902 100 -> Plus
X 6811317..6811417 3903..4003 100 -> Plus
X 6811480..6813807 4004..6331 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:35:49 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6703097..6703170 2229..2302 100 -> Plus
arm_X 6703407..6703439 2303..2335 100 -> Plus
arm_X 6702845..6703028 2045..2228 100 -> Plus
arm_X 6697737..6697799 1..63 100 -> Plus
arm_X 6699711..6700251 64..604 100 -> Plus
arm_X 6700651..6700837 605..791 100 -> Plus
arm_X 6700914..6701470 792..1348 100 -> Plus
arm_X 6701529..6701681 1349..1501 100 -> Plus
arm_X 6701832..6702374 1502..2044 100 -> Plus
arm_X 6703518..6703690 2336..2508 100 -> Plus
arm_X 6703760..6704671 2509..3420 100 -> Plus
arm_X 6704735..6705080 3421..3766 100 -> Plus
arm_X 6705150..6705285 3767..3902 100 -> Plus
arm_X 6705350..6705450 3903..4003 100 -> Plus
arm_X 6705513..6707840 4004..6331 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:38:30 Download gff for MIP17035.complete
Subject Subject Range Query Range Percent Splice Strand
X 6813776..6814316 64..604 100 -> Plus
X 6814716..6814902 605..791 100 -> Plus
X 6814979..6815535 792..1348 100 -> Plus
X 6815594..6815746 1349..1501 100 -> Plus
X 6815897..6816439 1502..2044 100 -> Plus
X 6816910..6817093 2045..2228 100 -> Plus
X 6817162..6817235 2229..2302 100 -> Plus
X 6817472..6817504 2303..2335 100 -> Plus
X 6817583..6817755 2336..2508 100 -> Plus
X 6817825..6818736 2509..3420 100 -> Plus
X 6818800..6819145 3421..3766 100 -> Plus
X 6819215..6819350 3767..3902 100 -> Plus
X 6819415..6819515 3903..4003 100 -> Plus
X 6819578..6821905 4004..6331 100   Plus
X 6811802..6811864 1..63 100 -> Plus

MIP17035.pep Sequence

Translation from 295 to 4095

> MIP17035.pep
MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNW
EHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQ
DCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAA
GCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDP
RAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVR
NFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPY
LIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPR
KTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPAKREHGDEP
IIIHRGNLSDFVKNLENQRAKSNTTGKPNQQAKRNDNEHFVMLNTGNNFE
EKNGNDNSNESNGKKSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAHAY
AQSHEDDKESPTEHEHSTGSSEEVSSSGGLDNHSASGSHSPPKPMPRTSR
SNSLPEASDSAGESSSTNTPRPRPRTTAASAYKPRLGPKPFSSTTGDVSF
DKVFAVPLAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHERE
PAVSGNGVQKSLTTSERRKSSADDDESSDKIFEQNSESSENSTEGEDRTD
ADLRRNCTSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKP
NQQQQQQGNVIDTKRISVPEGKLMEEHRRGNGAGLKKSATEAAFSAASTK
RTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERV
AVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLA
VACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLL
TASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCGRLGATVCKDGKI
RVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFDKVSERQISV
YNAQKLSAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDSTIYCYEITD
EEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLS
FTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPKVSLKPEGM
ETLSSIQQVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVSARMEFTTK
LEQDDMEGVDENEWQE*

MIP17035.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19341-PA 1260 GF19341-PA 1..1260 1..1266 5880 89.2 Plus
Dana\GF11765-PA 534 GF11765-PA 1..382 1..381 574 33.7 Plus
Dana\GF11765-PA 534 GF11765-PA 9..391 810..1196 505 31.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:12:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19612-PA 1255 GG19612-PA 1..1255 1..1266 6721 98.1 Plus
Dere\GG10792-PA 528 GG10792-PA 1..382 1..381 586 34.2 Plus
Dere\GG10792-PA 528 GG10792-PA 9..406 810..1212 510 31.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24448-PA 1285 GH24448-PA 1..1285 1..1266 5683 84.1 Plus
Dgri\GH19864-PA 543 GH19864-PA 1..390 1..389 569 33.2 Plus
Dgri\GH19864-PA 543 GH19864-PA 9..391 810..1196 510 32 Plus
Dgri\GH22022-PA 358 GH22022-PA 110..312 886..1102 163 24.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
pod1-PG 1266 CG4532-PG 1..1266 1..1266 6656 100 Plus
pod1-PF 1255 CG4532-PF 1..1255 1..1266 6580 99.1 Plus
pod1-PD 1074 CG4532-PD 403..1074 584..1266 3508 98.4 Plus
pod1-PC 1074 CG4532-PC 403..1074 584..1266 3508 98.4 Plus
pod1-PB 1074 CG4532-PB 403..1074 584..1266 3508 98.4 Plus
pod1-PA 1074 CG4532-PA 403..1074 584..1266 3508 98.4 Plus
pod1-PE 1074 CG4532-PE 403..1074 584..1266 3508 98.4 Plus
pod1-PD 1074 CG4532-PD 1..577 1..607 2136 73.8 Plus
pod1-PC 1074 CG4532-PC 1..577 1..607 2136 73.8 Plus
pod1-PB 1074 CG4532-PB 1..577 1..607 2136 73.8 Plus
pod1-PA 1074 CG4532-PA 1..577 1..607 2136 73.8 Plus
pod1-PE 1074 CG4532-PE 1..577 1..607 2136 73.8 Plus
coro-PG 535 CG9446-PG 7..528 6..538 576 29.1 Plus
coro-PF 535 CG9446-PF 7..528 6..538 576 29.1 Plus
coro-PE 535 CG9446-PE 7..528 6..538 576 29.1 Plus
coro-PC 528 CG9446-PC 7..521 6..521 559 29.9 Plus
coro-PB 528 CG9446-PB 7..521 6..521 559 29.9 Plus
coro-PA 528 CG9446-PA 7..521 6..521 559 29.9 Plus
coro-PD 534 CG9446-PD 7..527 6..521 544 29.4 Plus
coro-PC 528 CG9446-PC 9..406 810..1212 496 31 Plus
coro-PB 528 CG9446-PB 9..406 810..1212 496 31 Plus
coro-PA 528 CG9446-PA 9..406 810..1212 496 31 Plus
coro-PG 535 CG9446-PG 9..391 810..1196 495 31.3 Plus
coro-PF 535 CG9446-PF 9..391 810..1196 495 31.3 Plus
coro-PE 535 CG9446-PE 9..391 810..1196 495 31.3 Plus
coro-PD 534 CG9446-PD 9..412 810..1212 492 31.2 Plus
pod1-PD 1074 CG4532-PD 666..1009 54..395 442 30.7 Plus
pod1-PD 1074 CG4532-PD 54..395 858..1201 442 30.7 Plus
pod1-PC 1074 CG4532-PC 54..395 858..1201 442 30.7 Plus
pod1-PC 1074 CG4532-PC 666..1009 54..395 442 30.7 Plus
pod1-PB 1074 CG4532-PB 54..395 858..1201 442 30.7 Plus
pod1-PB 1074 CG4532-PB 666..1009 54..395 442 30.7 Plus
pod1-PA 1074 CG4532-PA 54..395 858..1201 442 30.7 Plus
pod1-PA 1074 CG4532-PA 666..1009 54..395 442 30.7 Plus
pod1-PE 1074 CG4532-PE 54..395 858..1201 442 30.7 Plus
pod1-PE 1074 CG4532-PE 666..1009 54..395 442 30.7 Plus
CG14692-PE 2851 CG14692-PE 1041..1437 363..756 178 24 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:12:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21649-PA 1108 GI21649-PA 1..679 1..669 2926 83.9 Plus
Dmoj\GI21649-PA 1108 GI21649-PA 678..1108 834..1266 2231 93.1 Plus
Dmoj\GI19814-PA 540 GI19814-PA 1..403 1..409 568 32.6 Plus
Dmoj\GI19814-PA 540 GI19814-PA 9..391 810..1196 508 32 Plus
Dmoj\GI21649-PA 1108 GI21649-PA 702..1041 54..391 451 30.6 Plus
Dmoj\GI21649-PA 1108 GI21649-PA 37..395 841..1201 438 29.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26753-PA 734 GL26753-PA 1..704 1..669 3027 82.8 Plus
Dper\GL10967-PA 540 GL10967-PA 1..382 1..381 580 34.5 Plus
Dper\GL23179-PA 461 GL23179-PA 42..391 40..389 562 36.4 Plus
Dper\GL10967-PA 540 GL10967-PA 9..391 810..1196 504 31.7 Plus
Dper\GL23179-PA 461 GL23179-PA 10..392 810..1196 494 31.7 Plus
Dper\GL26753-PA 734 GL26753-PA 54..395 858..1201 448 30.5 Plus
Dper\GL26753-PA 734 GL26753-PA 629..734 1193..1266 161 42.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:12:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18237-PA 1292 GA18237-PA 1..1292 1..1266 5872 87.3 Plus
Dpse\GA21791-PA 540 GA21791-PA 1..382 1..381 580 34.5 Plus
Dpse\GA30141-PA 461 GA30141-PA 42..391 40..389 562 36.4 Plus
Dpse\GA21791-PA 540 GA21791-PA 9..391 810..1196 504 31.7 Plus
Dpse\GA30141-PA 461 GA30141-PA 10..392 810..1196 493 31.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12531-PA 1254 GM12531-PA 1..1254 1..1266 6738 98.6 Plus
Dsec\GM11075-PA 528 GM11075-PA 1..382 1..381 582 33.9 Plus
Dsec\GM11075-PA 528 GM11075-PA 9..406 810..1212 508 31.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10295-PA 528 GD10295-PA 1..382 1..381 585 34.2 Plus
Dsim\GD10295-PA 528 GD10295-PA 9..406 810..1212 510 31.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16887-PA 1269 GJ16887-PA 1..1269 1..1266 5730 85.3 Plus
Dvir\GJ18509-PA 540 GJ18509-PA 1..382 1..381 574 33.7 Plus
Dvir\GJ18509-PA 540 GJ18509-PA 9..391 810..1196 511 32 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:12:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10269-PA 1268 GK10269-PA 1..1268 1..1266 5673 84.8 Plus
Dwil\GK15589-PA 540 GK15589-PA 1..382 1..381 580 33.9 Plus
Dwil\GK15589-PA 540 GK15589-PA 9..391 810..1196 507 31.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:12:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16773-PA 1255 GE16773-PA 1..1255 1..1266 6719 98.3 Plus
Dyak\GE24410-PA 528 GE24410-PA 1..382 1..381 576 33.7 Plus
Dyak\GE24410-PA 528 GE24410-PA 9..391 810..1196 505 31.5 Plus

MIP17035.hyp Sequence

Translation from 295 to 4095

> MIP17035.hyp
MAWRFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNW
EHTGSSVAVLPLDDCGRKSKTMPLLHGHTDTVTDLKFSPFHDGLLATASQ
DCLVKIWHIPEKGLEQSLSDPEAIFSHKQRRVETVGFHPTADGLMYSTAA
GCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRIFDP
RAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVR
NFNTPEKTLELDCSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPY
LIEGLRHTGEQTKGACLVPKRALKVMEAEVNRVLQLTSNMVIPIMYQVPR
KTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDPAKREHGDEP
IIIHRGNLSDFVKNLENQRAKSNTTGKPNQQAKRNDNEHFVMLNTGNNFE
EKNGNDNSNESNGKKSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAHAY
AQSHEDDKESPTEHEHSTGSSEEVSSSGGLDNHSASGSHSPPKPMPRTSR
SNSLPEASDSAGESSSTNTPRPRPRTTAASAYKPRLGPKPFSSTTGDVSF
DKVFAVPLAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHERE
PAVSGNGVQKSLTTSERRKSSADDDESSDKIFEQNSESSENSTEGEDRTD
ADLRRNCTSRSSFAERRRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKP
NQQQQQQGNVIDTKRISVPEGKLMEEHRRGNGAGLKKSATEAAFSAASTK
RTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHANQERV
AVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLA
VACDDGIVKIWHIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLL
TASYDMTIKLWDLRTMTEKCSLSGHTDQIFDFAWSPCGRLGATVCKDGKI
RVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFDKVSERQISV
YNAQKLSAPLNTASLDVSPSILIPFYDEDSSTLFVTGKGDSTIYCYEITD
EEPYICPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLS
FTVPRIKSELFQDDLFPPTRITWSATLSSEDWFASNDKAAPKVSLKPEGM
ETLSSIQQVPAQPVKKPDHPQFGGQKSEYEINKQQEIQKSVSARMEFTTK
LEQDDMEGVDENEWQE*

MIP17035.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:14:38
Subject Length Description Subject Range Query Range Score Percent Strand
pod1-PG 1266 CG4532-PG 1..1266 1..1266 6656 100 Plus
pod1-PF 1255 CG4532-PF 1..1255 1..1266 6580 99.1 Plus
pod1-PD 1074 CG4532-PD 403..1074 584..1266 3508 98.4 Plus
pod1-PC 1074 CG4532-PC 403..1074 584..1266 3508 98.4 Plus
pod1-PB 1074 CG4532-PB 403..1074 584..1266 3508 98.4 Plus
pod1-PD 1074 CG4532-PD 1..577 1..607 2136 73.8 Plus
pod1-PC 1074 CG4532-PC 1..577 1..607 2136 73.8 Plus
pod1-PD 1074 CG4532-PD 54..395 858..1201 442 30.7 Plus
pod1-PD 1074 CG4532-PD 666..1009 54..395 442 30.7 Plus
pod1-PC 1074 CG4532-PC 54..395 858..1201 442 30.7 Plus
pod1-PC 1074 CG4532-PC 666..1009 54..395 442 30.7 Plus