MIP17104.complete Sequence
1393 bp assembled on 2010-01-28
GenBank Submission: BT120280.1
> MIP17104.complete
AACAAACCGACAAGCCGACCGAGCGGGAGCTGTCTCGCTTTTTTTAAAAA
TTTGCACCAGCAAAAATCCAAATAAATTAGCAGAGTGCCAGTGAAGTAAG
TGAGCGTGAGTGCGCCAAGTCAAAATATAAATATTGTCATTTACGCCGTT
TCAAAATATATTTCCGCGAGCATTTCTCGAATCGAAAGTGAACCCAAAAT
ATATTATTCCAAGTGAAAAGGACTAGCCCAAAGATACACACACACACACA
CAGGAAAAATACCGACAGATCTGTAGTCCTTTTCGAGTTTTCCCGTGAGT
GCAACAAATACAGACACACCACACACACACTCGTTCGACTTTCAATATGG
CGGATGTCCTGGAGAAAAGCTCACTGCTGGATGCTGTGCCACCACTAGGC
GACCCCCACCCACCGCTGCCCCACCAGCAGCTGCAACAGGAAGCAGCAGC
AGCAGCAGCAGCAAATGCCGCACCACCAGCACCACCGCAGCAGCAACAAC
CACCACCCCATCAGCTGCAGCAGCAGCAGCCGCAACAACAGCAACTGCAA
CAGAAGCCAGCAAATGCGAGGGCTAATCAGGATCAAAAAGAATCGTCAGG
AAATCAAACTAATTCAGTCCTAGAGTAAGAACCATAACCTTGGCAATCGA
AATTAGGCTACAGAACTATGCAGACATTAGCCCAGGACTACGCTCCTTCC
ACGTCTGAGTCTGAATCCTTGGCTAACCTCACGTCAGTTTGGATCTCCCC
AGGTTTACTTTTATGTCTACGCATTAGAGCGCCGGAGTTTTGCGTGCTGC
CTGCTTGTAAATAAATAGACAACAATTAGGGGAACCTATGACAACAACAC
CTGGATAATGGAAAGGTGCGTGGCAAGCGGTGCAAGTTGGCTCTATGTGG
ATACAAAAATATATATGCCACCCTCCCGATTGTCGAGGGCAAAGGATTGG
GTCTGGGAATGGGAATGCACAAATGCGCGTCGAAATGCCTCCCCCGGTGG
CCATTAAATTAATCAAGTCAAATGAAATCTGCATATAAAATCAGCGTTAT
AGGCTCCCCATTCGCTCATTGTTGGCGTGTTGAATTTGCATTTTTCCCCG
GCGCCCCACTAATAAATTTGTATGTCAATAGAATATAGCCAGAATACAAG
GGGCTGCTCCACCAAAAATATATCCTGGCAGCGCTTTGAACTGCGCAAGG
ACACATTCTGTTTATGCGCCCCGAGAAGTTTACGAGCGACCACGCTCCGC
CAGACCAAGTTGGCGTATCAAAACAAATTCTAAGTATTGTAATTCGAAAT
TTTTCAAAGCAAATAAAAGCAGTCGAGTTTTAACACTCGCGCCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
MIP17104.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:40:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-RA | 2392 | tau-RA | 186..776 | 1..591 | 2955 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:51:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 23473756..23474524 | 1343..589 | 3535 | 97.9 | Minus |
chr3R | 27901430 | chr3R | 23479120..23479705 | 590..1 | 2795 | 98.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:21:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:51:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27650851..27651610 | 1346..587 | 3800 | 100 | Minus |
3R | 32079331 | 3R | 27656206..27656795 | 590..1 | 2950 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:38:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 27391682..27392441 | 1346..587 | 3800 | 100 | Minus |
3R | 31820162 | 3R | 27397037..27397626 | 590..1 | 2950 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:51:29 has no hits.
MIP17104.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:52:24 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 23473756..23474522 | 591..1343 | 97 | <- | Minus |
chr3R | 23479120..23479163 | 547..590 | 100 | == | Minus |
chr3R | 23479292..23479705 | 1..418 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-01-28 18:34:33 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..253 | 347..598 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:14:39 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 1..253 | 347..598 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:04:19 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 1..282 | 347..628 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:34:20 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 1..282 | 347..628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-01-28 18:34:31 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 16..614 | 1..598 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:14:39 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RA | 16..614 | 1..598 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:04:19 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 1..1343 | 1..1343 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:34:20 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tau-RE | 1..1343 | 1..1343 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:52:24 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27650854..27651606 | 591..1343 | 100 | <- | Minus |
3R | 27656206..27656795 | 1..590 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:52:24 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27650854..27651606 | 591..1343 | 100 | <- | Minus |
3R | 27656206..27656795 | 1..590 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:52:24 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27650854..27651606 | 591..1343 | 100 | <- | Minus |
3R | 27656206..27656795 | 1..590 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:04:19 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23476576..23477328 | 591..1343 | 100 | <- | Minus |
arm_3R | 23481928..23482517 | 1..590 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:04:57 Download gff for
MIP17104.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27391685..27392437 | 591..1343 | 100 | <- | Minus |
3R | 27397037..27397626 | 1..590 | 100 | | Minus |
MIP17104.pep Sequence
Translation from 346 to 627
> MIP17104.pep
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKESSGNQTNSVLE*
MIP17104.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12102-PA | 354 | GG12102-PA | 1..26 | 1..26 | 143 | 100 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-PE | 93 | CG45110-PE | 1..93 | 1..93 | 483 | 100 | Plus |
tau-PH | 288 | CG45110-PH | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PJ | 308 | CG45110-PJ | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PC | 349 | CG45110-PC | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PI | 350 | CG45110-PI | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PB | 361 | CG45110-PB | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PA | 361 | CG45110-PA | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PM | 367 | CG45110-PM | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PN | 375 | CG45110-PN | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PF | 403 | CG45110-PF | 1..86 | 1..86 | 431 | 95.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:58:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM16331-PA | 359 | GM16331-PA | 1..26 | 1..26 | 143 | 100 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:58:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18067-PA | 100 | GD18067-PA | 1..26 | 1..26 | 138 | 100 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:58:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE10550-PA | 362 | GE10550-PA | 1..26 | 1..26 | 143 | 100 | Plus |
MIP17104.hyp Sequence
Translation from 346 to 627
> MIP17104.hyp
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKESSGNQTNSVLE*
MIP17104.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:09:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tau-PE | 93 | CG45110-PE | 1..93 | 1..93 | 483 | 100 | Plus |
tau-PH | 288 | CG45110-PH | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PJ | 308 | CG45110-PJ | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PC | 349 | CG45110-PC | 1..86 | 1..86 | 431 | 95.3 | Plus |
tau-PI | 350 | CG45110-PI | 1..86 | 1..86 | 431 | 95.3 | Plus |