Clone MIP17622 Report

Search the DGRC for MIP17622

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:176
Well:22
Vector:pOT2
Associated Gene/TranscriptCG32264-RJ
Protein status:MIP17622.pep: gold
Sequenced Size:1941

Clone Sequence Records

MIP17622.complete Sequence

1941 bp assembled on 2010-03-11

GenBank Submission: BT122057.1

> MIP17622.complete
AACGCGTTCTCGTCGCGTCCGTCGAAAACAAAAAAGAAAATATATAGAAA
ATAATAAAACAAAATACAGCCGAAAATCGAATGAAAACGACCCCAACCTC
AACAACACCAACCAAATCACCAATAACAACTACTCCAACAACCTTAAAAA
ATCGAAGGATAAGAAATTAATTGGAGAGACAAGCGAATCAGCTTGAAGGG
CGACATCAAAGCCACGCTGATGATGGGCTACATCATGGGTTGTGCTTGTT
TCAAAGAACCAAGAAAAGACAAGACTGATGCACAACAACAACAACACGGA
GGCAATGGCACAATATCCACGCCCAACATCGAGCAGCCCACCTGCCAGGG
CTCGATGCTGCCGCCCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGGA
GTGGCAAGATGGAGCGGCCCAACACGCTCGCCGGCGCCAATAAGCTGACC
CGTCGCGGGGTCAACATCTGCTATCACAACGAGCACATGTATGGCGAAGA
TGGAAAAATGGTGGGTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCGG
GTGGCAAACTACCGCCGGGCGTAATGCTCAGCGAACTGCCGGAGCCGCCG
ATTCCGCTGTCGGAGATCGGACCGATCCCACCGCCCCCGATGTTCTCCAC
TCCGAGTCCCACGCTCATCGCAGGACGACCGCACGGGCCAGGGGCCGTCA
ACGATCAGGATTATCAGCAGGACTACGACTACGATGATAACGATCCCGAT
CAGGATGAGCTTGACTCGGACGATGAGTACGCCCCGTATGGTGGCAACCA
TGTGCGCATGATGGACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAGC
CCAAACCAAATGCAGTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGGT
ATGCAGCCCGCTTCCGCCTCCACGCCGGTCACGCCCACCCAGGAACATGG
AGCGGGAAGTGCGGCAACGGCAGCGGCCATGGCAAACAGCAATGGCGGTA
TTGGCTCGATGGCGGCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAAC
CAACGACCGCTGGTCGTTCGCCAGGATGCGGCGGGCAATAACTATTCGCT
CAACAGGCAGCAAATGTTCAACATCCAATTGCCGTGCACCGTGGAGAACA
AGGAGAACGCCCGGCCATTTGTGATACGCGAAAGCAGCAGCGATAGTGAC
GACAGCGATGGCCATATCGTCTACAGGGACGAGGACAACGACAACACCCG
GCTGGCCAAACTGGCCCGCAAGGAGTCGCTGTCCCTGAAGCTGCAGCTCC
GACCGGACAAGCAGGACCTGATCAACCGCAACATCCTGCACCAGGTCAAC
GACAACGAGCTCAAGGAGTCCAAGGAGGCGATCGGAGCACGCCTCATCCG
GCGGCTGTCCATGCGACCCACGGCCGAGGAGCTGGTCGAGCGCAACATCT
TGAAAACTCAATCACCCGCCGAGGAGAAGAAGCAGAAGGAGGAGAAGAAG
TCGTATCTGTTGCGCAAACTCAGCTTTCGGCCGACCGTCGAGGAGCTGAA
GGAGAAGAAGATCATCCGATTCAACGACTACATCGAGGTCACGCAGGCCC
ACGACTACGATCGGCGGGCGGACAAGCCGTGGACAAGACTGACGCCAAAG
GACAAGGCCGCCATTCGCAAGGAGCTGAACGAGTTCAAGTCCTCCGAAAT
GGCCGTCCACGAGGGCAGTCGGCATTTGACGAGATTCCATAGGCCATGAC
GATTGCAATGGCAGCAACTTTCCAGCAAATTACAACAGCAACCGAAGCAG
CAATTGTATTTCATGCAGCATAAAATTGTCAACAAATGTTTAAAAGCAAA
AAATTAAGCCAGCAAACTAAAAACGAAGGAAACTTTCAACGCAAAAAAAA
AGCAAGCATAGAAATGCAAAAATTAAAAAAAAAAAAAAAAA

MIP17622.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RB 4734 CG32264-RB 2718..4404 255..1941 8435 100 Plus
CG32264.b 4920 CG32264.b 2718..4404 255..1941 8435 100 Plus
CG32264.c 6779 CG32264.c 2718..4404 255..1941 8435 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 3721528..3721895 1103..736 1840 100 Minus
chr3L 24539361 chr3L 3718013..3718365 1456..1104 1750 99.7 Minus
chr3L 24539361 chr3L 3717561..3717837 1733..1457 1340 98.9 Minus
chr3L 24539361 chr3L 3722228..3722477 740..491 1220 99.2 Minus
chr3L 24539361 chr3L 3723012..3723247 490..255 1165 99.6 Minus
chr3L 24539361 chr3L 3716583..3716774 1924..1732 915 99.5 Minus
chr3L 24539361 chr3L 3757805..3757972 256..89 825 99.4 Minus
chr3L 24539361 chr3L 3765026..3765084 59..1 295 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:21:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3722156..3722523 1103..736 1840 100 Minus
3L 28110227 3L 3718638..3718990 1456..1104 1765 100 Minus
3L 28110227 3L 3718196..3718472 1733..1457 1385 100 Minus
3L 28110227 3L 3722856..3723105 740..491 1235 99.6 Minus
3L 28110227 3L 3723639..3723874 490..255 1180 100 Minus
3L 28110227 3L 3717200..3717409 1941..1732 1050 100 Minus
3L 28110227 3L 3758407..3758574 256..89 840 100 Minus
3L 28110227 3L 3765643..3765731 89..1 445 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 3722156..3722523 1103..736 1840 100 Minus
3L 28103327 3L 3718638..3718990 1456..1104 1765 100 Minus
3L 28103327 3L 3718196..3718472 1733..1457 1385 100 Minus
3L 28103327 3L 3722856..3723105 740..491 1235 99.6 Minus
3L 28103327 3L 3723639..3723874 490..255 1180 100 Minus
3L 28103327 3L 3717200..3717409 1941..1732 1050 100 Minus
3L 28103327 3L 3758407..3758574 256..89 840 100 Minus
3L 28103327 3L 3765643..3765731 89..1 445 100 Minus
Blast to na_te.dros performed 2019-03-15 18:54:13
Subject Length Description Subject Range Query Range Score Percent Strand
Damb\P-element_T 3329 Damb\P-element_T P_T 3329bp Derived from AF012414. 877..942 1219..1154 123 65.2 Minus

MIP17622.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:54:58 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 3716614..3716772 1734..1892 100 <- Minus
chr3L 3717561..3717837 1457..1733 98 <- Minus
chr3L 3718013..3718365 1104..1456 99 <- Minus
chr3L 3721528..3721894 737..1103 100 <- Minus
chr3L 3722232..3722477 491..736 99 <- Minus
chr3L 3723012..3723245 257..490 99 <- Minus
chr3L 3757805..3757971 90..256 99 <- Minus
chr3L 3765013..3765025 77..89 100 == Minus
chr3L 3765026..3765084 1..59 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:25:10 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 875..2373 248..1749 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:56:03 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 875..2373 248..1749 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:35:23 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RJ 1..1530 220..1749 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:18 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RJ 1..1530 220..1749 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:25:09 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RB 2616..4289 248..1924 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:56:03 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RG 581..2418 86..1924 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:35:23 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RG 581..2418 86..1924 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:18 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
CG32264-RG 581..2418 86..1924 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:58 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722156..3722522 737..1103 100 <- Minus
3L 3717217..3717407 1734..1924 100 <- Minus
3L 3718196..3718472 1457..1733 100 <- Minus
3L 3718638..3718990 1104..1456 100 <- Minus
3L 3722860..3723105 491..736 100 <- Minus
3L 3723639..3723872 257..490 100 <- Minus
3L 3758407..3758573 90..256 100 <- Minus
3L 3765643..3765731 1..89 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:58 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722156..3722522 737..1103 100 <- Minus
3L 3717217..3717407 1734..1924 100 <- Minus
3L 3718196..3718472 1457..1733 100 <- Minus
3L 3718638..3718990 1104..1456 100 <- Minus
3L 3722860..3723105 491..736 100 <- Minus
3L 3723639..3723872 257..490 100 <- Minus
3L 3758407..3758573 90..256 100 <- Minus
3L 3765643..3765731 1..89 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:58 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3722156..3722522 737..1103 100 <- Minus
3L 3717217..3717407 1734..1924 100 <- Minus
3L 3718196..3718472 1457..1733 100 <- Minus
3L 3718638..3718990 1104..1456 100 <- Minus
3L 3722860..3723105 491..736 100 <- Minus
3L 3723639..3723872 257..490 100 <- Minus
3L 3758407..3758573 90..256 100 <- Minus
3L 3765643..3765731 1..89 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:35:23 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3717217..3717407 1734..1924 100 <- Minus
arm_3L 3718196..3718472 1457..1733 100 <- Minus
arm_3L 3718638..3718990 1104..1456 100 <- Minus
arm_3L 3722156..3722522 737..1103 100 <- Minus
arm_3L 3722860..3723105 491..736 100 <- Minus
arm_3L 3723639..3723872 257..490 100 <- Minus
arm_3L 3758407..3758573 90..256 100 <- Minus
arm_3L 3765643..3765731 1..89 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:32:36 Download gff for MIP17622.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3718196..3718472 1457..1733 100 <- Minus
3L 3718638..3718990 1104..1456 100 <- Minus
3L 3722156..3722522 737..1103 100 <- Minus
3L 3722860..3723105 491..736 100 <- Minus
3L 3723639..3723872 257..490 100 <- Minus
3L 3758407..3758573 90..256 100 <- Minus
3L 3765643..3765731 1..89 100   Minus
3L 3717217..3717407 1734..1924 100 <- Minus

MIP17622.pep Sequence

Translation from 219 to 1748

> MIP17622.pep
MMGYIMGCACFKEPRKDKTDAQQQQHGGNGTISTPNIEQPTCQGSMLPPP
GGGGHHQVDGSGKMERPNTLAGANKLTRRGVNICYHNEHMYGEDGKMVGG
PPGSTPPPYPGGKLPPGVMLSELPEPPIPLSEIGPIPPPPMFSTPSPTLI
AGRPHGPGAVNDQDYQQDYDYDDNDPDQDELDSDDEYAPYGGNHVRMMDT
QRVEEIPAKEPKPNAVPLKSALKKKGGMQPASASTPVTPTQEHGAGSAAT
AAAMANSNGGIGSMAAAAAAAAQQSANQRPLVVRQDAAGNNYSLNRQQMF
NIQLPCTVENKENARPFVIRESSSDSDDSDGHIVYRDEDNDNTRLAKLAR
KESLSLKLQLRPDKQDLINRNILHQVNDNELKESKEAIGARLIRRLSMRP
TAEELVERNILKTQSPAEEKKQKEEKKSYLLRKLSFRPTVEELKEKKIIR
FNDYIEVTQAHDYDRRADKPWTRLTPKDKAAIRKELNEFKSSEMAVHEGS
RHLTRFHRP*

MIP17622.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:17:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10261-PA 1029 GF10261-PA 519..1029 13..509 2534 93.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:17:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14249-PA 801 GG14249-PA 296..801 13..509 2619 97.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15049-PA 1030 GH15049-PA 498..1030 13..509 1911 84.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PJ 509 CG32264-PJ 1..509 1..509 2694 100 Plus
CG32264-PM 927 CG32264-PM 431..927 13..509 2623 100 Plus
CG32264-PL 759 CG32264-PL 263..759 13..509 2623 100 Plus
CG32264-PK 822 CG32264-PK 326..822 13..509 2623 100 Plus
CG32264-PE 998 CG32264-PE 502..998 13..509 2623 100 Plus
CG32264-PB 790 CG32264-PB 294..790 13..509 2623 100 Plus
CG32264-PI 937 CG32264-PI 431..937 13..509 2596 97.8 Plus
CG32264-PD 1008 CG32264-PD 502..1008 13..509 2596 97.8 Plus
CG32264-PG 464 CG32264-PG 1..464 46..509 2442 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12812-PA 780 GI12812-PA 247..780 13..509 1962 85.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:18:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10602-PA 917 GA10602-PA 699..917 292..509 992 95 Plus
Dpse\GA10602-PA 917 GA10602-PA 526..684 13..159 608 87.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:18:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14043-PA 812 GM14043-PA 307..812 13..509 2623 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:18:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13322-PA 795 GD13322-PA 290..795 13..509 2623 97.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12956-PA 771 GJ12956-PA 255..771 13..509 2013 88.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:18:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20368-PA 831 GK20368-PA 324..831 13..505 1993 88.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:18:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20678-PA 810 GE20678-PA 305..810 13..509 2618 97.2 Plus

MIP17622.hyp Sequence

Translation from 219 to 1748

> MIP17622.hyp
MMGYIMGCACFKEPRKDKTDAQQQQHGGNGTISTPNIEQPTCQGSMLPPP
GGGGHHQVDGSGKMERPNTLAGANKLTRRGVNICYHNEHMYGEDGKMVGG
PPGSTPPPYPGGKLPPGVMLSELPEPPIPLSEIGPIPPPPMFSTPSPTLI
AGRPHGPGAVNDQDYQQDYDYDDNDPDQDELDSDDEYAPYGGNHVRMMDT
QRVEEIPAKEPKPNAVPLKSALKKKGGMQPASASTPVTPTQEHGAGSAAT
AAAMANSNGGIGSMAAAAAAAAQQSANQRPLVVRQDAAGNNYSLNRQQMF
NIQLPCTVENKENARPFVIRESSSDSDDSDGHIVYRDEDNDNTRLAKLAR
KESLSLKLQLRPDKQDLINRNILHQVNDNELKESKEAIGARLIRRLSMRP
TAEELVERNILKTQSPAEEKKQKEEKKSYLLRKLSFRPTVEELKEKKIIR
FNDYIEVTQAHDYDRRADKPWTRLTPKDKAAIRKELNEFKSSEMAVHEGS
RHLTRFHRP*

MIP17622.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-PJ 509 CG32264-PJ 1..509 1..509 2694 100 Plus
CG32264-PM 927 CG32264-PM 431..927 13..509 2623 100 Plus
CG32264-PL 759 CG32264-PL 263..759 13..509 2623 100 Plus
CG32264-PK 822 CG32264-PK 326..822 13..509 2623 100 Plus
CG32264-PE 998 CG32264-PE 502..998 13..509 2623 100 Plus