Clone MIP18131 Report

Search the DGRC for MIP18131

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:181
Well:31
Vector:pOT2
Associated Gene/Transcriptcad-RD
Protein status:MIP18131.pep: wuzgold
Sequenced Size:1479

Clone Sequence Records

MIP18131.complete Sequence

1479 bp assembled on 2010-03-15

GenBank Submission: BT122084.1

> MIP18131.complete
ATTGACAAAGCAAAATATATCCATTATAACCCAAACTGAAACTCCAGAAA
ATGTGCAACTAAAACATATTGGCCATCAAAGTGATAAGACTTAGAGATTA
ACGCCGGATTATTGGACACCGGACCGAGCACTGGGACTATCTTCGGAGAA
AGCGCACCTAATCTAACCTCAAAATGGTTTCGCACTACTACAACACACTG
CCCTACACACAAAAGCACAGTGCCGCCAATTTGGCCTATGCCTCAGCGGC
GGGCCAGCCATGGAACTGGACGCCCAACTACCACCACACGCCGCCGAACC
ACCAGTTCCTGGGCGATGTGGACTCCTCGCATGCCGCCCACCACGCGGCC
GCTGCCCACCAGATGTACTACAACTCCCATCACATGTTCCACTCGGCGGC
GGCGGCCTCTGCCGGGGAGTGGCACTCACCCGCCTCGAGCACGGCGGATA
ACTTCGTTCAGAATGTGCCCACGTCGGCCCACCAGCTGATGCAGCAGCAC
CACCATCATCACGCCCATGCCTCCAGCAGTTCCGCCAGTTCCGGGAGCAG
CAGTAGCGGTGGTGCACCGGGTGCGCCCCAGCTCAACGAGACCAACAGCA
GCATCGGCGTCGGAGGAGCAGGCGGTGGCGGTGGTGTTGGCGGGGCCACC
GATGGAGGACCAGGTTCCGCACCACCCAACCATCAGCAGCACATCGCCGA
AGGTCTGCCGTCGCCACCGATTACCGTTTCGGGCTCGGAAATCTCTAGCC
CGGGGGCGCCGACTTCTGCCTCGTCGCCGCATCATCACTTGGCACACCAT
TTGAGTGCCGTCGCCAACAACAACAACAACAACAACAACAACAACAATAG
CCCATCCACCCATAACAACAACAACAATAACAATTCGGTGAGCAACAACA
ACAGGACATCGCCATCGAAGCCGCCATACTTCGACTGGATGAAGAAGCCC
GCCTATCCAGCACAACCACAACCAGTTCATGCAAATTTTCTGTGATTATG
TGGATTTCTTGCGTTTTGTTTGCTGTGTTTTCCTACACCTCTGGAAAAAC
AAGCAAAGGCAATTCAGATGGCAGTGCAGCGATCTCAAACATGAGAAGGA
ATAAACCACTCACACATTTGTTCACGATTTATGACCCGGGCGCATGTCAA
GAAGGGGAAAATGAAGACGACGATATCGACGATATCGACAATAACGCCGA
TATCCATTAAGCCCATAAAATCTGTTGGCATGCAATTAGCGTTTATGGCC
GCTAATCCAGCTGATCAAGCCGACAAGGCGACTCAAGTTTGCCTTATTTA
TTATTATTCAAAACCCCCTTTAGCCTCCGCTGTCTGAATGTCACCTTTCT
GACGCGCGACTGATTGTAATTCTTGCCGTATTTCATTTGCCTAAAAAGCA
CAAATATTTAAGTAAGAATAAATATTATATAAAAAAAAATAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP18131.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:36:48
Subject Length Description Subject Range Query Range Score Percent Strand
cad-RB 2535 cad-RB 217..1191 1..975 4875 100 Plus
cad-RA 2579 cad-RA 219..1193 1..975 4875 100 Plus
cad.a 2573 cad.a 201..1175 1..975 4875 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:54:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20769441..20770415 1..975 4800 99.5 Plus
chr2L 23010047 chr2L 20771339..20771805 973..1439 2195 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:21:37 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20770935..20771909 1..975 4875 100 Plus
2L 23513712 2L 20772833..20773299 973..1439 2320 99.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20770935..20771909 1..975 4875 100 Plus
2L 23513712 2L 20772833..20773299 973..1439 2320 99.7 Plus
Blast to na_te.dros performed 2019-03-15 18:54:16
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 5081..5139 163..221 124 67.8 Plus

MIP18131.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:54:59 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20769441..20770254 1..814 99 == Plus
chr2L 20770324..20770415 884..975 100 -> Plus
chr2L 20771342..20771765 976..1400 99 <- Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-03-15 17:44:09 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RB 1..805 174..979 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:56:17 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RB 1..805 174..979 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:35:27 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RD 1..822 174..995 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:21 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RA 1..805 174..979 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-03-15 17:44:07 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RB 42..1019 1..979 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:56:17 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RB 42..1019 1..979 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:35:27 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RD 205..1634 1..1430 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:21 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
cad-RA 205..1182 1..979 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:59 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20770935..20771909 1..975 100 -> Plus
2L 20772836..20773299 976..1440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:59 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20770935..20771909 1..975 100 -> Plus
2L 20772836..20773299 976..1440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:54:59 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20770935..20771909 1..975 100 -> Plus
2L 20772836..20773299 976..1440 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:35:27 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20770935..20771909 1..975 100 -> Plus
arm_2L 20772836..20773299 976..1440 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:32:51 Download gff for MIP18131.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20770935..20771909 1..975 100 -> Plus
2L 20772836..20773299 976..1440 99   Plus

MIP18131.pep Sequence

Translation from 173 to 994

> MIP18131.pep
MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVD
SSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPT
SAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAG
GGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSAS
SPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKP
PYFDWMKKPAYPAQPQPVHANFL*

MIP18131.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 21:22:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15355-PA 440 GF15355-PA 1..263 1..267 573 68.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 21:22:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21252-PA 439 GG21252-PA 1..261 1..267 804 92.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 21:22:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11619-PA 442 GH11619-PA 1..271 1..267 355 50 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
cad-PC 445 CG1759-PC 1..267 1..267 1480 100 Plus
cad-PB 427 CG1759-PB 1..267 1..267 1480 100 Plus
cad-PA 427 CG1759-PA 1..267 1..267 1480 100 Plus
dsx-PF 427 CG11094-PF 168..330 51..200 172 32.7 Plus
dsx-PC 427 CG11094-PC 168..330 51..200 172 32.7 Plus
dsx-PB 427 CG11094-PB 168..330 51..200 172 32.7 Plus
dsx-PD 549 CG11094-PD 168..330 51..200 172 32.7 Plus
dsx-PA 549 CG11094-PA 168..330 51..200 172 32.7 Plus
dsx-PE 572 CG11094-PE 168..330 51..200 172 32.7 Plus
vvl-PC 713 CG10037-PC 363..534 39..238 167 29 Plus
vvl-PE 726 CG10037-PE 363..534 39..238 167 29 Plus
vvl-PF 742 CG10037-PF 363..534 39..238 167 29 Plus
CG43347-PD 2652 CG43347-PD 33..211 74..237 157 28.2 Plus
CG43347-PB 2666 CG43347-PB 33..211 74..237 157 28.2 Plus
CG43347-PC 2684 CG43347-PC 33..211 74..237 157 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 21:22:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17922-PA 409 GI17922-PA 1..252 1..267 481 58.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 21:22:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18519-PA 411 GL18519-PA 1..254 1..267 641 67.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 21:22:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14567-PA 413 GA14567-PA 1..256 1..267 626 66.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 21:22:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23368-PA 228 GM23368-PA 1..222 1..222 1040 95.5 Plus
Dsec\GM23369-PA 207 GM23369-PA 1..29 239..267 166 96.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 21:22:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24280-PA 440 GD24280-PA 1..262 1..267 1300 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 21:22:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17694-PA 447 GJ17694-PA 1..272 1..267 543 60.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 21:22:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14914-PA 415 GK14914-PA 1..264 1..267 573 68.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 21:22:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12346-PA 437 GE12346-PA 1..259 1..267 1270 95.5 Plus

MIP18131.hyp Sequence

Translation from 173 to 994

> MIP18131.hyp
MVSHYYNTLPYTQKHSAANLAYASAAGQPWNWTPNYHHTPPNHQFLGDVD
SSHAAHHAAAAHQMYYNSHHMFHSAAAASAGEWHSPASSTADNFVQNVPT
SAHQLMQQHHHHHAHASSSSASSGSSSSGGAPGAPQLNETNSSIGVGGAG
GGGGVGGATDGGPGSAPPNHQQHIAEGLPSPPITVSGSEISSPGAPTSAS
SPHHHLAHHLSAVANNNNNNNNNNNSPSTHNNNNNNNSVSNNNRTSPSKP
PYFDWMKKPAYPAQPQPVHANFL*

MIP18131.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
cad-PB 427 CG1759-PB 1..267 1..267 1480 100 Plus
cad-PA 427 CG1759-PA 1..267 1..267 1480 100 Plus
cad-PC 445 CG1759-PC 1..267 1..267 1480 100 Plus
dsx-PF 427 CG11094-PF 168..330 51..200 172 32.7 Plus
dsx-PC 427 CG11094-PC 168..330 51..200 172 32.7 Plus