Clone MIP18912 Report

Search the DGRC for MIP18912

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:189
Well:12
Vector:pOT2
Associated Gene/TranscriptCG10440-RB
Protein status:MIP18912.pep: gold
Sequenced Size:2490

Clone Sequence Records

MIP18912.complete Sequence

2490 bp assembled on 2010-04-28

GenBank Submission: BT124861.1

> MIP18912.complete
GTTCAGTGTGTTTGTGCCGATGGTGTTTGCTTTTGCCTTCGACAACGGCA
GCAGTTACATTGTTAATTGCGGCAGATTAGTTGCAGGCCACAAGAAAACA
AGAACAACAAAGCCAGATCGGACCACTTAAACCGGAAATAGACCATTAAA
CGCTCGAACAAAGGCATCATATGGTGGAAAAGCCAAGCCGCTAAACAACA
AACGGCGCTCTCTATCTCTTTGCCGCTGCTTCTGCTGCTGCTGCTGCTGC
TCTCTCAAGGTCGTCGGCTCAGACGCCAGCGCCGACGAACTTCACTCCAC
CCCCACTCGCAACAAGACGCAACTCGAGCCGCAACACGCAACATTGGGGA
GCCGAACCATTGGCCATTCACCATTCGCCATTCGCCATCCATCAGCCAGC
GAGCTAAATCAGTATTCGAGCAACTCTCGACGCGAATGCAAGTGAGAACT
CCGTTTGTTGCATTGGATCAACGATCACCGTTGACGGTGGATTCCTCCTG
CCCCAAACGAAAAAAATGCGATATGGACCGAGAGCGCGAAAGAGATGTCA
AGGCCCTGGAGCCACGCGACTTATCCTCCACGGGCCGCATTTACGCCAGA
AGCGATATTAAAATCAGCTCCTCGCCAACCGTCTCGCCAACGATCTCAAA
CTCCTCTTCGCCCACACCGACGCCACCCGCCAGTTCCTCAGTGACGCCGC
TGGGCTTGCCCGGAGCGGTGGCAGCTGCTGCCGCCGCCGTCGGAGGAGCC
TCATCGGCGGGGGCCAGTTCCTATTTGCACGGCAACCACAAGCCCATCAC
CGGGATTCCGTGTGTGGCCGCCGCCTCCCGCTATACGGCGCCCGTTCACA
TCGACGTGGGCGGGACCATCTACACCAGCTCACTGGAGACGCTCACCAAG
TACCCGGAGTCGAAGCTGGCCAAGCTCTTCAATGGCCAGATACCCATCGT
GCTGGACTCGCTGAAGCAGCACTATTTCATCGATCGCGACGGGGGCATGT
TCCGCCACATTCTGAACTTTATGAGAAACTCAAGACTTCTGATTGCCGAG
GATTTTCCCGACCTGGAGCTGCTGCTGGAGGAGGCTCGCTACTACGAAGT
GGAGCCGATGATTAAGCAGCTGGAAAGCATGCGCAAGGATCGCGTTCGCA
ATGGCAACTATTTGGTGGCGCCACCCACTCCACCGGCTCGCCACATCAAG
ACGAGCCCGAGGACCAGCGCATCGCCGGAGTGCAATTACGAGGTAGTGGC
GCTGCACATCTCGCCAGACCTTGGCGAACGCATAATGCTGTCGGCAGAAC
GGGCTCTGCTCGACGAGCTCTTCCCGGAGGCCAGCCAAGCGACACAGTCG
AGTCGCAGCGGAGTGTCCTGGAACCAGGGCGACTGGGGGCAAATCATTCG
CTTCCCCCTCAACGGCTACTGCAAGCTGAACTCGGTGCAGGTGCTCACCC
GACTCCTCAACGCCGGCTTCACCATCGAGGCCAGCGTTGGGGGCCAGCAG
TTCTCCGAGTATCTGCTGGCGCGACGCGTTCCAATGTGATAGGCTCTGGG
TAGGGATTCCCCAGCTCCCCAAGAAGCTGCAGATGTGGCCCTGATTCCGT
CGGCTTCTGTGGCTTCTGTTTCCGGCTCCGGTTCGGACTCGGGTTCGGGT
TCGGCATCGGGCTCTTTGCGACGCGGGCGTCTGATCCATGTGCGTTGCAG
GCGCTAATTGATCTGGGTTAGGTGACCCAGAATCGCAGGTGGGGAGAGTG
GTCTATGAACAATTCCAAGTGATACAATGTACTGAGAAGGGCAAATGAAA
AATCAAGTGTAACGCCGAATTGTTTATATATCTAACACACTAAAACTCGA
TCCAACACCGTTTTGGGGACTGCGCATTGCTGCTCTGAGCAGTAAAATAC
ATAATTTAGAAATACTTGGACACCGTTCGGTGAGGATGCAAGTTCTGAAT
CTGAATCCAAATGTTATTTAATGTTTATCAATTAAGTTTGCTGGCACGGA
CACTGAACGCAAACACGCTCGTGTGTATTATTAAGCATTTACAGAGCCAA
GAGCCCAGCACTGATTTTGTTTTTTAGCCTTGATTTTAAGTCGATATTGT
TTTCTCTAAGTGTACCACCTAATGCTAAAGACCCTAAGTTGTTTCATTAA
ATCAAGTTGGCCAGGGATATTAGCTGGCTTAAATTATTGTAACACACACG
GAAAACTATGGTAGTATCAACTCACAGCGAAAATAGTTTTGTAGTACTTA
ATTGATGTAATTGAACCTTTATGAATGTAAACTATGGGATAACTTTTTCA
ATATATACGATCCGACGTCTAAATAGTCTACACCAATTCAAATACAATTA
CATGCAAATATAGATATATTTAACGAAATACAGTTTGCGACCACGCCCTC
TATAGAACAACCACTCAATTGAATATTTAAATAAAGAAAAAACATACGTG
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

MIP18912.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:16:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG10440.b 2364 CG10440.b 1..2364 88..2451 11805 99.9 Plus
CG10440.c 2672 CG10440.c 665..2672 447..2454 10025 99.9 Plus
CG10440-RA 2422 CG10440-RA 415..2422 447..2454 10025 99.9 Plus
CG10440.c 2672 CG10440.c 1..357 90..446 1785 100 Plus
CG10440-RA 2422 CG10440-RA 1..107 340..446 535 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:59:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 17446669..17448014 2451..1106 6700 99.9 Minus
chr2R 21145070 chr2R 17448211..17448701 1105..615 2425 99.6 Minus
chr2R 21145070 chr2R 17457829..17458224 446..51 1920 99 Minus
chr2R 21145070 chr2R 17448961..17449067 617..511 535 100 Minus
chr2R 21145070 chr2R 17457176..17457240 509..445 325 100 Minus
chr2R 21145070 chr2R 17462403..17462456 54..1 270 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:03
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 21560243..21561591 2454..1106 6745 100 Minus
2R 25286936 2R 21561794..21562284 1105..615 2455 100 Minus
2R 25286936 2R 21571417..21571812 446..51 1980 100 Minus
2R 25286936 2R 21562544..21562650 617..511 535 100 Minus
2R 25286936 2R 21570762..21570826 509..445 325 100 Minus
2R 25286936 2R 21575982..21576035 54..1 270 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:34:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 21561442..21562790 2454..1106 6745 100 Minus
2R 25260384 2R 21562993..21563483 1105..615 2455 100 Minus
2R 25260384 2R 21572616..21573011 446..51 1980 100 Minus
2R 25260384 2R 21563743..21563849 617..511 535 100 Minus
2R 25260384 2R 21571961..21572025 509..445 325 100 Minus
2R 25260384 2R 21577181..21577234 54..1 270 100 Minus
Blast to na_te.dros performed on 2019-03-16 21:59:03 has no hits.

MIP18912.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:59:57 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 17448961..17449068 510..617 99 <- Minus
chr2R 17457176..17457238 447..509 100 <- Minus
chr2R 17457829..17458220 55..446 98 <- Minus
chr2R 17462403..17462456 1..54 100   Minus
chr2R 17446669..17448014 1106..2451 99 <- Minus
chr2R 17448211..17448698 618..1105 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:01:46 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RA 1..1017 523..1539 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:24:53 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RA 1..1017 523..1539 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:06:17 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RB 1..1104 436..1539 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:52 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RB 1..1104 436..1539 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:01:46 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RA 1..36 411..446 100 -> Plus
CG10440-RA 344..2348 447..2451 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:24:53 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RA 1..36 411..446 100 -> Plus
CG10440-RA 344..2348 447..2451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:17 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RB 1..2451 1..2451 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:52 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
CG10440-RB 1..2451 1..2451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:57 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21560246..21561591 1106..2451 100 <- Minus
2R 21561794..21562281 618..1105 100 <- Minus
2R 21562544..21562651 510..617 99 <- Minus
2R 21570762..21570824 447..509 100 <- Minus
2R 21571417..21571808 55..446 100 <- Minus
2R 21575982..21576035 1..54 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:57 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21560246..21561591 1106..2451 100 <- Minus
2R 21561794..21562281 618..1105 100 <- Minus
2R 21562544..21562651 510..617 99 <- Minus
2R 21570762..21570824 447..509 100 <- Minus
2R 21571417..21571808 55..446 100 <- Minus
2R 21575982..21576035 1..54 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:59:57 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21560246..21561591 1106..2451 100 <- Minus
2R 21561794..21562281 618..1105 100 <- Minus
2R 21562544..21562651 510..617 99 <- Minus
2R 21570762..21570824 447..509 100 <- Minus
2R 21571417..21571808 55..446 100 <- Minus
2R 21575982..21576035 1..54 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:17 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17447751..17449096 1106..2451 100 <- Minus
arm_2R 17449299..17449786 618..1105 100 <- Minus
arm_2R 17450049..17450156 510..617 99 <- Minus
arm_2R 17458267..17458329 447..509 100 <- Minus
arm_2R 17458922..17459313 55..446 100 <- Minus
arm_2R 17463487..17463540 1..54 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:56:59 Download gff for MIP18912.complete
Subject Subject Range Query Range Percent Splice Strand
2R 21561445..21562790 1106..2451 100 <- Minus
2R 21562993..21563480 618..1105 100 <- Minus
2R 21563743..21563850 510..617 99 <- Minus
2R 21571961..21572023 447..509 100 <- Minus
2R 21572616..21573007 55..446 100 <- Minus
2R 21577181..21577234 1..54 100   Minus

MIP18912.pep Sequence

Translation from 435 to 1538

> MIP18912.pep
MQVRTPFVALDQRSPLTVDSSCPKRKKCDMDRERERDVKALEPRDLSSTG
RIYARSDIKISSSPTVSPTISNSSSPTPTPPASSSVTPLGLPGAVAAAAA
AVGGASSAGASSYLHGNHKPITGIPCVAAASRYTAPVHIDVGGTIYTSSL
ETLTKYPESKLAKLFNGQIPIVLDSLKQHYFIDRDGGMFRHILNFMRNSR
LLIAEDFPDLELLLEEARYYEVEPMIKQLESMRKDRVRNGNYLVAPPTPP
ARHIKTSPRTSASPECNYEVVALHISPDLGERIMLSAERALLDELFPEAS
QATQSSRSGVSWNQGDWGQIIRFPLNGYCKLNSVQVLTRLLNAGFTIEAS
VGGQQFSEYLLARRVPM*

MIP18912.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12090-PA 343 GF12090-PA 1..343 30..367 1762 97.4 Plus
Dana\GF17008-PA 227 GF17008-PA 5..100 137..236 180 41 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20766-PA 338 GG20766-PA 1..338 30..367 1789 100 Plus
Dere\GG15048-PA 228 GG15048-PA 5..104 137..236 176 39.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:44:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20052-PA 350 GH20052-PA 1..350 30..367 1579 90.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:00:40
Subject Length Description Subject Range Query Range Score Percent Strand
twz-PB 367 CG10440-PB 1..367 1..367 1881 100 Plus
twz-PA 338 CG10440-PA 1..338 30..367 1727 100 Plus
Ktl-PB 228 CG10830-PB 5..104 137..236 172 38.6 Plus
Ktl-PA 228 CG10830-PA 5..104 137..236 172 38.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20461-PA 350 GI20461-PA 1..350 30..367 1583 90.6 Plus
Dmoj\GI21987-PA 230 GI21987-PA 5..103 137..236 176 41.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17486-PA 342 GL17486-PA 1..342 30..367 1750 96.5 Plus
Dper\GL23251-PA 228 GL23251-PA 5..104 137..236 155 35.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:44:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10319-PA 342 GA10319-PA 1..342 30..367 1750 96.5 Plus
Dpse\GA10583-PA 228 GA10583-PA 5..104 137..236 155 35.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15711-PA 338 GM15711-PA 1..338 30..367 1789 100 Plus
Dsec\GM23149-PA 228 GM23149-PA 5..101 137..236 169 39.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:44:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25187-PA 338 GD25187-PA 1..338 30..367 1789 100 Plus
Dsim\GD20024-PA 228 GD20024-PA 5..101 137..236 169 39.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:44:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22311-PA 352 GJ22311-PA 1..352 30..367 1581 89.8 Plus
Dvir\GJ14346-PA 230 GJ14346-PA 5..103 137..236 163 38.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22258-PA 338 GK22258-PA 1..338 30..367 1708 95.6 Plus
Dwil\GK22689-PA 230 GK22689-PA 5..106 137..236 163 35.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:44:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13699-PA 338 GE13699-PA 1..338 30..367 1789 100 Plus
Dyak\GE25029-PA 228 GE25029-PA 5..104 137..236 175 38.6 Plus

MIP18912.hyp Sequence

Translation from 912 to 2015

> MIP18912.hyp
MQVRTPFVALDQRSPLTVDSSCPKRKKCDMDRERERDVKALEPRDLSSTG
RIYARSDIKISSSPTVSPTISNSSSPTPTPPASSSVTPLGLPGAVAAAAA
AVGGASSAGASSYLHGNHKPITGIPCVAAASRYTAPVHIDVGGTIYTSSL
ETLTKYPESKLAKLFNGQIPIVLDSLKQHYFIDRDGGMFRHILNFMRNSR
LLIAEDFPDLELLLEEARYYEVEPMIKQLESMRKDRVRNGNYLVAPPTPP
ARHIKTSPRTSASPECNYEVVALHISPDLGERIMLSAERALLDELFPEAS
QATQSSRSGVSWNQGDWGQIIRFPLNGYCKLNSVQVLTRLLNAGFTIEAS
VGGQQFSEYLLARRVPM*

MIP18912.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:51:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG10440-PB 367 CG10440-PB 1..367 1..367 1881 100 Plus
CG10440-PA 338 CG10440-PA 1..338 30..367 1727 100 Plus
CG10830-PA 228 CG10830-PA 5..104 137..236 172 38.6 Plus