Clone MIP19170 Report

Search the DGRC for MIP19170

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:191
Well:70
Vector:pOT2
Associated Gene/TranscriptCG44270-RA
Protein status:MIP19170.pep: gold
Sequenced Size:732

Clone Sequence Records

MIP19170.complete Sequence

732 bp assembled on 2010-03-23

GenBank Submission: BT122106.1

> MIP19170.complete
CGCTTCAAAGTTTTCATTTTTGGAAAATTTACGATTTAACGTTAAAGTGG
AGCAAAACAAAAAAAGCCTTATATACTCGCTGGTACATATACGTATGTAC
TACTTAAAAGAATGGAAACTTTGAACACGACCAAAATCCCACTAAGTAAG
TGTACGCCCAGTTCAGTTCGGTTTGGGTACCGGGAATATCCTCCGAGGTT
CCAGGTTAGCCCGGGTCCTCCATGCTCTCCATGTTCTCCTGGCTCTCCGA
CAGGGTTCAGCTGCACCAGGTGTGCCCGTGCCCGGGTGTCTTCCACCTTT
CGGTTTCCAGCCCCGAAACCGGAATCTACGATTGAATTTCAGACAGTATA
CGGCATCCAGGCACCCAGGCACCCAACCACCCAAACCACCATCCGGCGAC
CAAGGAAAACGCAAAGGCTTTTGCAATTTTTATGTGCAATTTTTTACATG
AGAACCAAAGGCGGTACGAAGTGTCGCTTGTGGCTCGTTAAGGTTAAGGG
GTGAAGGGTGTTTTTTTTCCTATTTTTTGGGTGGTGCGGACTAGCTGTTG
GGCTGCCACTGATAACCGTGGAGTGGATTAGTCTTTGGATATCATTTGCA
GCGTGATCGTAGTACCCATTTCCAAAAGATTCACTATATGTGAAAATTCA
TATATTCCTTAAAGTATTTTTATAACAATAAAAAAAGCATCTTTAGTGTC
CTTTTTATAACTAAAAAAAAAAAAAAAAAAAA

MIP19170.complete Blast Records

Blast to MB8.fasta performed on 2010-07-15 21:37:13 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:20:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20529811..20530264 267..712 2100 98 Plus
chr2L 23010047 chr2L 20529489..20529754 1..266 1300 99.2 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:21:56 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:20:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20531388..20531836 267..715 2245 100 Plus
2L 23513712 2L 20531066..20531331 1..266 1330 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20531388..20531836 267..715 2245 100 Plus
2L 23513712 2L 20531066..20531331 1..266 1330 100 Plus
Blast to na_te.dros performed on 2019-03-16 15:20:58 has no hits.

MIP19170.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:21:38 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20529489..20529754 1..266 99 -> Plus
chr2L 20529811..20530264 267..712 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:43:56 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 1..393 112..504 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:45:08 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 1..393 112..504 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:43:56 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 1..712 1..712 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:45:08 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
CG44270-RA 1..712 1..712 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:21:38 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20531066..20531331 1..266 100 -> Plus
2L 20531388..20531833 267..712 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:21:38 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20531066..20531331 1..266 100 -> Plus
2L 20531388..20531833 267..712 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:21:38 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20531066..20531331 1..266 100 -> Plus
2L 20531388..20531833 267..712 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:43:56 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20531066..20531331 1..266 100 -> Plus
arm_2L 20531388..20531833 267..712 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:33:42 Download gff for MIP19170.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20531066..20531331 1..266 100 -> Plus
2L 20531388..20531833 267..712 100   Plus

MIP19170.pep Sequence

Translation from 111 to 503

> MIP19170.pep
METLNTTKIPLSKCTPSSVRFGYREYPPRFQVSPGPPCSPCSPGSPTGFS
CTRCARARVSSTFRFPAPKPESTIEFQTVYGIQAPRHPTTQTTIRRPRKT
QRLLQFLCAIFYMRTKGGTKCRLWLVKVKG*

MIP19170.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG44270-PA 130 CG44270-PA 1..130 1..130 710 100 Plus

MIP19170.hyp Sequence

Translation from 111 to 503

> MIP19170.hyp
METLNTTKIPLSKCTPSSVRFGYREYPPRFQVSPGPPCSPCSPGSPTGFS
CTRCARARVSSTFRFPAPKPESTIEFQTVYGIQAPRHPTTQTTIRRPRKT
QRLLQFLCAIFYMRTKGGTKCRLWLVKVKG*

MIP19170.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:03:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG44270-PA 130 CG44270-PA 1..130 1..130 710 100 Plus