Clone MIP19317 Report

Search the DGRC for MIP19317

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:193
Well:17
Vector:pOT2
Associated Gene/Transcriptqtc-RN
Protein status:MIP19317.pep: gold
Sequenced Size:1985

Clone Sequence Records

MIP19317.complete Sequence

1985 bp assembled on 2013-05-17

> MIP19317.complete
CATTTTCAATCACATTCAGAACACCTTATTTCAGTTTATATGGACTCACA
GAATATTTTAGTGGCGCAATGTCTCTCCAGTTGAACGGCGGCAGTGACAT
CAGCAGCAGTGGCACCTCCAGCAGCAGCAGCAACAACAAGGAGTCGTCCC
CCAGGACCACCAGGACGCCCAGGACACCGCAGACACCGCAGACGCCACAA
ACGCCGGCCAGCGGAGTAGCTGCATCTGTGGCAGAGACGCCACACAGCTG
CATTCGGCAGGGCAACTGCGTCAAGGCCAACCAGGTTAAACTTTCCACGC
TGCACGAGTCCAAGATTTCTCCGAGGACTCCGCCCGTTACACCGGACTCA
CCCAGTACCTATCTGGACGATGATATAGACTCGATGTACTCGTTCGCTAC
CACCACTTCGGGTCGCTCCACGATGTCCTGCGAGCATCCCTATGTGGCCA
GGAACGGCACCACCTTCAGTGGTCGCAAGATGAAGTACGTCGTGCATTGC
TCCAACTATGCGGGTCAGGTGGGACCCGATTATCTGACGCCCACGCAGCG
GGCACAGCGCCAGATCCGGCGGCTCAAGGAGCTGCTGTGCATCGCGCGAC
AGGATCTGGAGCAGAAGGATACGGAGCTGCTGCGTCTGACGCGCGAGGTG
GTGGAGCTGCGCCTGTTCAAGGCATCGCTCAGTTCGCCGGAGGAGCGTTC
GGCCTCCTCCGATGCGGTCACCGTGCGTGAGGCGGAGCTGAAGACCTCGC
AGGATGTCTCGCCCATCGTCGACATGGTGGACGAGGGCAACGCAAAGGGC
AGTCCACGCCATCTAAGCCGCCAGCAGCAGCAGCAGGCGAACCACTCACT
GCAGGCCATGCAGATGTCGGCGGAGATGCAGAGCTCCTACGCGGACTCCG
GCCATTTCGAGGACCTAACCATGTCGTCGGTGCACTCGAAGGACTCGCAG
ACGCAGAGCGAGGCATGCGGCACAGCCACGCCCGATGGAGAAGCGGATGT
GGGATGCGGAGCCGGCGGTGATTCCGCCAGCAATCTGGAGAACTACGAGC
TGCAGCGACAGGAACTGATAAGCATGTACGAGCATCGGATCGAGGAGCTC
ATTCGGAGTCAGGACAGCGCCACTAGCGATCTGAAGCGATCCCACAACGA
CAAGGTGGAGGCGCTGCTCCAGAAGCTGGCCGAGTGCAATACCAGGTACT
CGGACATGGTGCCCGACTATGAGCAGGCCAAGCAGCGCATCCGTGAGCTG
GAGAAGCAGCTGGAGGATTTGCAGCGCAAGCTGATCGAGCACGAGGAGAA
GCAGAACAAGATGTACCTGCACATGTACCAGCAGGGACAGGAGGCGGAGC
GCATTTCTCGAGCGGATCAGGCACTGGATTTGGCACAGCGTCAACCGGAG
AGCAAGGTGTCGATCAATGAGCTACTGCATCAGTTGCAGAGCACGCAGGA
CGAGTTGGAGAACATACGCACCATTTATCGCCGCCTGCTGGAAGCCCAGA
AGAATCGCACCCATGTGGATCCGGAGGTGACGCTGCAGTTCCTCAAGAGC
GCTATCTTCTACTTCCTCACGGACAAGGAGAACTCCCAGGGCCATCTGCA
GGCCATCGAGAGCATACTCGAGTTCACCGATGCCGAGAAGCAGAAGATCA
GCGCCGCCAATCGAACGCCAAAATTGCACGCCAAAATGAGCAAAACGATG
TCTACGATTTTGGTTCGCGCTAAATTGCATTGTTTTCAGCTAATTGGCTG
GCGGCATTAATTTCAATTTTATTTTGTTAACTGAATAATTTTGTTAAATT
TTGCAGGCGCCCGTGTTAAGTTCTCTCTTTGGCAACGAAGTGTATAAAAT
TTTCCCATAAGTTAATTTTTACGAACATATATATTTTGTGGTCTAAGGCT
TAAGGCATACTAGTACGTCCTTTTTATGAAATACGAACATCTTGAGATAA
ATACAATTTTACAAAATCTAAAAAAAAAAAAAAAA

MIP19317.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:24:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5066407..5067328 450..1371 4610 100 Plus
chr2L 23010047 chr2L 5065969..5066350 71..452 1910 100 Plus
chr2L 23010047 chr2L 5069453..5069749 1673..1969 1485 100 Plus
chr2L 23010047 chr2L 5069197..5069399 1470..1672 1015 100 Plus
chr2L 23010047 chr2L 5067393..5067494 1368..1469 510 100 Plus
chr2L 23010047 chr2L 5065101..5065171 1..71 355 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5067307..5068228 450..1371 4610 100 Plus
2L 23513712 2L 5066869..5067250 71..452 1910 100 Plus
2L 23513712 2L 5070353..5070650 1673..1970 1490 100 Plus
2L 23513712 2L 5070097..5070299 1470..1672 1015 100 Plus
2L 23513712 2L 5068293..5068394 1368..1469 510 100 Plus
2L 23513712 2L 5066001..5066071 1..71 355 100 Plus
Blast to na_te.dros performed 2019-03-15 14:24:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2806..2985 84..266 222 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6697..6901 62..274 180 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6792..6902 84..192 171 65.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6923 84..204 164 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6917 84..266 159 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6771..6936 84..242 156 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2344..2399 84..139 154 75 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6901 102..280 154 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6759..6924 84..249 154 58.8 Plus
roo 9092 roo DM_ROO 9092bp 1103..1156 89..142 153 75.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2492 87..283 148 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6843..7037 84..284 144 55.4 Plus
roo 9092 roo DM_ROO 9092bp 1039..1161 76..197 143 61.6 Plus
roo 9092 roo DM_ROO 9092bp 1083..1137 84..138 140 72.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2439..2492 86..139 135 72.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2754..2967 75..281 134 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2488 92..252 127 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2419..2474 84..139 127 69.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2611..2808 84..281 127 56.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1533..1573 98..138 124 78 Plus
TART-B 10654 TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). 8617..8672 93..147 124 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2385..2426 98..139 120 76.2 Plus
roo 9092 roo DM_ROO 9092bp 1034..1150 90..200 119 60.7 Plus
roo 9092 roo DM_ROO 9092bp 1072..1128 88..138 119 71.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2439..2540 101..200 118 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2461..2540 84..162 118 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2599..2650 84..138 115 70.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6872..6944 92..161 115 64.4 Plus

MIP19317.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:25:39 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5065101..5065171 1..71 100 -> Plus
chr2L 5065970..5065981 72..83 100 == Plus
chr2L 5066037..5066349 139..451 100 -> Plus
chr2L 5066409..5067327 452..1370 100 -> Plus
chr2L 5067396..5067494 1371..1469 100 -> Plus
chr2L 5069197..5069399 1470..1672 100 -> Plus
chr2L 5069453..5069749 1673..1969 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-05-17 15:30:43 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RG 1..1608 69..1678 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:28:37 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RN 1..1692 69..1760 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:58:23 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RN 1..1692 69..1760 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-05-17 15:30:43 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RG 196..1809 62..1672 99 -> Plus
qtc-RG 1863..2159 1673..1969 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:28:37 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RN 1..1890 12..1901 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:58:23 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
qtc-RN 1..1890 12..1901 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:25:39 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5066001..5066071 1..71 100 -> Plus
2L 5066870..5067249 72..451 100 -> Plus
2L 5067309..5068227 452..1370 100 -> Plus
2L 5068296..5068394 1371..1469 100 -> Plus
2L 5070097..5070299 1470..1672 100 -> Plus
2L 5070353..5070649 1673..1969 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:25:39 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5066001..5066071 1..71 100 -> Plus
2L 5066870..5067249 72..451 100 -> Plus
2L 5067309..5068227 452..1370 100 -> Plus
2L 5068296..5068394 1371..1469 100 -> Plus
2L 5070097..5070299 1470..1672 100 -> Plus
2L 5070353..5070649 1673..1969 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:25:39 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5066001..5066071 1..71 100 -> Plus
2L 5066870..5067249 72..451 100 -> Plus
2L 5067309..5068227 452..1370 100 -> Plus
2L 5068296..5068394 1371..1469 100 -> Plus
2L 5070097..5070299 1470..1672 100 -> Plus
2L 5070353..5070649 1673..1969 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:28:37 Download gff for MIP19317.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5066001..5066071 1..71 100 -> Plus
arm_2L 5066870..5067249 72..451 100 -> Plus
arm_2L 5067309..5068227 452..1370 100 -> Plus
arm_2L 5068296..5068394 1371..1469 100 -> Plus
arm_2L 5070097..5070299 1470..1672 100 -> Plus
arm_2L 5070353..5070649 1673..1969 100   Plus

MIP19317.hyp Sequence

Translation from 2 to 1759

> MIP19317.hyp
FSITFRTPYFSLYGLTEYFSGAMSLQLNGGSDISSSGTSSSSSNNKESSP
RTTRTPRTPQTPQTPQTPASGVAASVAETPHSCIRQGNCVKANQVKLSTL
HESKISPRTPPVTPDSPSTYLDDDIDSMYSFATTTSGRSTMSCEHPYVAR
NGTTFSGRKMKYVVHCSNYAGQVGPDYLTPTQRAQRQIRRLKELLCIARQ
DLEQKDTELLRLTREVVELRLFKASLSSPEERSASSDAVTVREAELKTSQ
DVSPIVDMVDEGNAKGSPRHLSRQQQQQANHSLQAMQMSAEMQSSYADSG
HFEDLTMSSVHSKDSQTQSEACGTATPDGEADVGCGAGGDSASNLENYEL
QRQELISMYEHRIEELIRSQDSATSDLKRSHNDKVEALLQKLAECNTRYS
DMVPDYEQAKQRIRELEKQLEDLQRKLIEHEEKQNKMYLHMYQQGQEAER
ISRADQALDLAQRQPESKVSINELLHQLQSTQDELENIRTIYRRLLEAQK
NRTHVDPEVTLQFLKSAIFYFLTDKENSQGHLQAIESILEFTDAEKQKIS
AANRTPKLHAKMSKTMSTILVRAKLHCFQLIGWRH*

MIP19317.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:52:52
Subject Length Description Subject Range Query Range Score Percent Strand
qtc-PN 563 CG14039-PN 1..563 23..585 2867 100 Plus
qtc-PM 595 CG14039-PM 34..595 24..585 2862 100 Plus
qtc-PK 594 CG14039-PK 1..594 23..585 2825 94.8 Plus
qtc-PJ 626 CG14039-PJ 34..626 24..585 2820 94.8 Plus
qtc-PG 535 CG14039-PG 1..535 23..557 2717 100 Plus

MIP19317.pep Sequence

Translation from 2 to 1759

> MIP19317.pep
FSITFRTPYFSLYGLTEYFSGAMSLQLNGGSDISSSGTSSSSSNNKESSP
RTTRTPRTPQTPQTPQTPASGVAASVAETPHSCIRQGNCVKANQVKLSTL
HESKISPRTPPVTPDSPSTYLDDDIDSMYSFATTTSGRSTMSCEHPYVAR
NGTTFSGRKMKYVVHCSNYAGQVGPDYLTPTQRAQRQIRRLKELLCIARQ
DLEQKDTELLRLTREVVELRLFKASLSSPEERSASSDAVTVREAELKTSQ
DVSPIVDMVDEGNAKGSPRHLSRQQQQQANHSLQAMQMSAEMQSSYADSG
HFEDLTMSSVHSKDSQTQSEACGTATPDGEADVGCGAGGDSASNLENYEL
QRQELISMYEHRIEELIRSQDSATSDLKRSHNDKVEALLQKLAECNTRYS
DMVPDYEQAKQRIRELEKQLEDLQRKLIEHEEKQNKMYLHMYQQGQEAER
ISRADQALDLAQRQPESKVSINELLHQLQSTQDELENIRTIYRRLLEAQK
NRTHVDPEVTLQFLKSAIFYFLTDKENSQGHLQAIESILEFTDAEKQKIS
AANRTPKLHAKMSKTMSTILVRAKLHCFQLIGWRH*

MIP19317.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15721-PA 733 GF15721-PA 155..733 23..557 2298 79.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25049-PA 725 GG25049-PA 158..725 23..557 2578 88.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11490-PA 727 GH11490-PA 205..727 73..557 2016 77.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
qtc-PN 563 CG14039-PN 1..563 23..585 2867 100 Plus
qtc-PM 595 CG14039-PM 34..595 24..585 2862 100 Plus
qtc-PK 594 CG14039-PK 1..594 23..585 2825 94.8 Plus
qtc-PJ 626 CG14039-PJ 34..626 24..585 2820 94.8 Plus
qtc-PG 535 CG14039-PG 1..535 23..557 2717 100 Plus
qtc-PL 543 CG14039-PL 9..543 23..557 2714 99.8 Plus
qtc-PE 690 CG14039-PE 156..690 23..557 2714 99.8 Plus
qtc-PB 566 CG14039-PB 1..566 23..557 2675 94.5 Plus
qtc-PI 574 CG14039-PI 9..574 23..557 2672 94.3 Plus
qtc-PF 721 CG14039-PF 156..721 23..557 2672 94.3 Plus
qtc-PA 721 CG14039-PA 156..721 23..557 2672 94.3 Plus
qtc-PH 490 CG14039-PH 1..467 23..489 2376 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16985-PA 951 GI16985-PA 394..951 23..557 2050 73.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26551-PA 703 GL26551-PA 167..700 23..552 2232 78.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12718-PA 689 GA12718-PA 153..686 23..552 2239 78.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18526-PA 567 GM18526-PA 22..567 46..557 2510 91.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12022-PA 68 GD12022-PA 1..68 490..557 359 100 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24105-PA 682 GJ24105-PA 178..681 78..555 2014 78.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:20:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23882-PA 682 GK23882-PA 178..682 80..557 2163 82.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11331-PA 735 GE11331-PA 161..735 23..557 2437 86.3 Plus