Clone MIP19557 Report

Search the DGRC for MIP19557

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:195
Well:57
Vector:pOT2
Associated Gene/TranscriptCG14985-RC
Protein status:MIP19557.pep: gold
Sequenced Size:1878

Clone Sequence Records

MIP19557.complete Sequence

1878 bp assembled on 2010-06-04

GenBank Submission: BT125003.1

> MIP19557.complete
CGTTTTCGAATGTTGCATTCCGTGGCAATAACATATTAAATGTGAAAGAT
CCTCGATCAAAAGATCCTGAACAGTGAGATATTCGAAGTACTTAATACTC
CCCCGCCTGAGATGCCAAGATGAGCAGCGCTTTGAACGCCAAGGAGTTAC
TTATACGCGCCGTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAA
ACGCTGTACACAGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGA
ACCGGATGAAGCCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACA
TGGATCGGGCTGACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTC
GGCGAGGTGGTTTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGA
CTACGATCAGCTCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCA
TGCTGGAGGAACCCTACATGACGCAGAACTATCAGTATCAAAATCTAATA
AGATTCTTGGAGCTAGCTGCCACAAATTGCCCAAACCTAAAGTATTTTCG
ACTGATCACCAAAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAA
CAAATCTTGGACAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTC
TACATAAAATACGAAGACTCTCTGCACGATCGAAAAATTTAGTTATGGGA
CAGCTTAATTTGGCATATTCGCAATCTGTACACCCACTTGAAAACGTATG
TATTTAAATTATCTTATCTATTCGTTTTTTTTTTCTTGCAGCTTAAGCAA
TGGCTACATAATTAAGATTGGGCGAGGTCTGCACTTCTACAAGCCCGCCA
ATCCGATGTATTCCATTGGCCTGGTCAACTACAAATTCCGAAAATGCCTC
CAAACGGATGTGGATATATGGCGCAACTCAAGCGCTGCATCGTGAAAAGG
CAGACAATATTGTTTAGTTTTAAGAAATGCAACTTCATTTAGACTGGCTC
TTGCCAATTTTATAAAGATTTCATTCAATTTCTACAAAAACGAGCTGCGA
GTGTGTTGCAGTCACCCACAATTGCAGATTTTGGCCGGCTATAAATCTGC
AGACGCCACGAAGACACCGAAACTAATATATGGACGTGGCCAAAGGGGCG
TTCTCCTTCATCCTCCGTCCGCCGTCCTCTGTGCTCTCTGCTGGCTCCGA
CGATGCCCTGCCAGAAAATGTTTAAAATTCATAACTTTCACGCCACTTGC
GGATGCGGAGGCAGCTGCACAGCTGGCGGCCCGTCCTGGCTGCTGTTTTG
AATGCCTCTCGCCACTGAGGCAGCCAGCGGGTGGCCACTGCAGTTGCATA
AAAGACAGAAGCGGAAGCTCATGCTTTACCAGCTTCTGTCCGTGTCCTTA
AAGCCAGGTCTGCAGCTCGACGGCGGTACAGTTGAGCCTCTGTAGGTGAA
ACATTGACGCCATTCTGGAAAGCAGCCACTCGAGTATCGTCAGTTACTGA
AAAGTAACTTTCAAAGTACGCACTTCAGCTAGATCATTTCTGTGCTCATT
ACCTGATTTTTGGATATAGTCCCAGCTCCAGTTGGGACCAATGGAGTCGG
CCTGTTCCTGTTCCTGTTCGTAATGCCAGTGCCAGTAGACATGTGCGTGG
ATAATTAGAACTGCGACACAGTTGGCTGCACATCGCAATCGGAATTGGAG
GCGAAGTCGGTGTGCCACCTTCTCATCGTGTGTGGGGTATATTTTCAATT
TACTTGGTGCCATGCCAGGGATTTATCAACAGATGAAGGCAATTGTTACG
CAAAGGCCCGAAATGCGGCGCGATGAGCCGGCCTAATAAATTGCACCAGA
GCTAAAAAAAAAAAAAAAAAAAAAAAAA

MIP19557.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:40:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 2902 CG14985-RB 732..1797 792..1857 5330 100 Plus
CG14985.a 790 CG14985.a 31..790 1..760 3800 100 Plus
CG14985-RB 2902 CG14985-RB 41..735 1..695 3460 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:09:57
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4003802..4004963 692..1853 5810 100 Plus
chr3L 24539361 chr3L 4002866..4003350 1..485 2425 100 Plus
chr3L 24539361 chr3L 4003519..4003729 483..693 1055 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:09:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4004416..4005581 692..1857 5830 100 Plus
3L 28110227 3L 4003480..4003964 1..485 2425 100 Plus
3L 28110227 3L 4004133..4004343 483..693 1055 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:56:35
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4004416..4005581 692..1857 5830 100 Plus
3L 28103327 3L 4003480..4003964 1..485 2425 100 Plus
3L 28103327 3L 4004133..4004343 483..693 1055 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:09:55 has no hits.

MIP19557.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:10:33 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4002866..4003350 1..485 100 -> Plus
chr3L 4003522..4003727 486..691 100 -> Plus
chr3L 4003802..4004963 692..1853 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-06-04 11:06:23 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 573..726 792..945 100   Plus
CG14985-RB 1..572 120..691 100 == Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 22:01:07 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 1..572 120..691 100 == Plus
CG14985-RB 573..726 792..945 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:05:39 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RC 1..573 120..692 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:51 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RC 1..573 120..692 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-04 11:06:22 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 9..695 1..687 100 == Plus
CG14985-RB 696..1761 786..1853 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 22:01:07 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 9..695 1..687 100 == Plus
CG14985-RB 696..1761 786..1853 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:05:39 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RC 7..1859 1..1853 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:51 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RC 7..1859 1..1853 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:10:33 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003480..4003964 1..485 100 -> Plus
3L 4004136..4004341 486..691 100 -> Plus
3L 4004416..4005577 692..1853 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:10:33 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003480..4003964 1..485 100 -> Plus
3L 4004136..4004341 486..691 100 -> Plus
3L 4004416..4005577 692..1853 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:10:33 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003480..4003964 1..485 100 -> Plus
3L 4004136..4004341 486..691 100 -> Plus
3L 4004416..4005577 692..1853 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:05:39 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4003480..4003964 1..485 100 -> Plus
arm_3L 4004136..4004341 486..691 100 -> Plus
arm_3L 4004416..4005577 692..1853 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:38:53 Download gff for MIP19557.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003480..4003964 1..485 100 -> Plus
3L 4004136..4004341 486..691 100 -> Plus
3L 4004416..4005577 692..1853 100   Plus

MIP19557.hyp Sequence

Translation from 119 to 691

> MIP19557.hyp
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKI*

MIP19557.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:19:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG14985-PB 241 CG14985-PB 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..196 9..190 315 37.4 Plus

MIP19557.pep Sequence

Translation from 119 to 691

> MIP19557.pep
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKI*

MIP19557.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:13:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25021-PA 241 GF25021-PA 1..190 1..190 831 81.6 Plus
Dana\GF13266-PA 278 GF13266-PA 20..197 9..190 323 37.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15175-PA 248 GG15175-PA 1..190 1..190 948 92.6 Plus
Dere\GG22138-PA 267 GG22138-PA 19..196 9..190 337 39 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:13:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15772-PA 241 GH15772-PA 3..189 2..190 738 73.5 Plus
Dgri\GH21125-PA 270 GH21125-PA 22..195 14..190 299 36.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG14985-PB 241 CG14985-PB 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..196 9..190 315 37.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:13:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12552-PA 236 GI12552-PA 1..188 1..190 787 77.4 Plus
Dmoj\GI18729-PA 278 GI18729-PA 16..193 9..190 293 34.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:13:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16948-PA 274 GL16948-PA 19..196 9..190 315 37.9 Plus
Dper\GL16059-PA 156 GL16059-PA 38..105 123..190 299 80.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:13:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13405-PA 241 GA13405-PA 1..190 1..190 834 81.1 Plus
Dpse\GA15817-PA 274 GA15817-PA 19..196 9..190 315 37.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14605-PA 195 GM14605-PA 1..170 1..170 767 87.1 Plus
Dsec\GM15860-PA 267 GM15860-PA 19..196 9..190 304 37.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11623-PA 267 GD11623-PA 19..196 9..190 303 37.4 Plus
Dsim\GD13796-PA 109 GD13796-PA 1..59 1..59 288 93.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15455-PA 239 GJ15455-PA 1..188 1..190 814 78.4 Plus
Dvir\GJ21749-PA 276 GJ21749-PA 16..193 9..190 294 34.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17508-PA 229 GK17508-PA 1..188 1..190 815 78.4 Plus
Dwil\GK15925-PA 302 GK15925-PA 22..199 9..190 317 37.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21393-PA 250 GE21393-PA 1..190 1..190 937 91.6 Plus
Dyak\GE12219-PA 267 GE12219-PA 19..196 9..190 326 37.9 Plus