Clone MIP19787 Report

Search the DGRC for MIP19787

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:197
Well:87
Vector:pOT2
Associated Gene/TranscriptJon66Cii-RA
Protein status:MIP19787.pep: gold
Sequenced Size:849

Clone Sequence Records

MIP19787.complete Sequence

849 bp assembled on 2013-06-03

> MIP19787.complete
CAACATGAAAGCATTCATAGCTATCCTGGCTTTGGCTGTGGCCTCGGCCT
CTGGCGCCACCATGCCCCGTTTGGCCACCGAGAAACTGACCCCGGTCCAC
ACCAAGGACATGCAGGGTCGCATCACCAACGGCTATCCGGCTGAGGAGGG
CAAGGCTCCCTACACCGTCGGTCTGGGCTTCAGCGGCGGCTGGTGGTGCG
GTGGTTCGATCATCGCACACGATTGGGTGCTCACCGCCGAGCACTGCATC
GGAGATGCTGACTCCGTAACTGTCTACTTCGGAGCCACCTGGCGCACCAA
CGCCCAGTTCACCCACTGGGTTGGCAACGGTAACTTTATCAAGCACTCAT
CCGCCGATATTGCCCTCATCCGCATTCCCCACGTGGACTTCTGGCACATG
GTGAACAAGGTGGAGCTGCCCAGCTACAACGATCGCTACAACGACTACAA
CGAATGGTGGGCTGTTGCCTGCGGCTGGGGAGGCACCTATGACGGCAGCC
CACTGCCCGACTACCTGCAGTGTGTCGATCTCCAGATCATCCACAACTCC
GAGTGCTCCGGATACTATGGAAGCGTGGGAGACAACATCCTCTGTGTCAG
GACTCCCGACGGCAAGTCCACCTGCGGTGGTGACTCCGGCGGCCCCCTGG
TCACCCATGACGGTACCAAGCTTGTGGGGGTCACCAACTTTGGTTCCGTC
GCCGGCTGCCAGTCGGGTGCTCCCGCTGGATTCCAGCGTGTCACCTACCA
CCTGGACTGGATTCGCGACCATACCGGCATTGCTTACTACTAATCGACTA
TATCTGATTAAAAAAAAACTTCTTGAAGCGTAAAAAAAAAAAAAAAAAA

MIP19787.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8384842..8385672 831..1 4155 100 Minus
chr3L 24539361 chr3L 8383680..8384387 114..818 2165 87.6 Plus
chr2L 23010047 chr2L 4949073..4949748 789..114 1730 83.7 Minus
chr3R 27901430 chr3R 26309638..26310052 780..363 540 75.8 Minus
chr3R 27901430 chr3R 26311896..26312310 363..780 525 75.6 Plus
chr3R 27901430 chr3R 25745038..25745452 363..780 495 75.1 Plus
chr3R 27901430 chr3R 25746223..25746637 780..363 495 75.1 Minus
chr2L 23010047 chr2L 4953423..4953858 793..355 445 74.5 Minus
chr2L 23010047 chr2L 4953915..4954109 316..128 400 81.5 Minus
chr2R 21145070 chr2R 4579422..4579547 355..480 315 83.3 Plus
chr3L 24539361 chr3L 6046573..6046780 480..273 290 76 Minus
chr3L 24539361 chr3L 6045384..6045491 355..462 285 84.3 Plus
chr3R 27901430 chr3R 25744729..25744902 81..248 280 78.7 Plus
chr3R 27901430 chr3R 25746773..25746946 248..81 280 78.7 Minus
chr2L 23010047 chr2L 4951394..4951569 780..605 250 76.1 Minus
chr2L 23010047 chr2L 4951885..4952096 316..114 245 75.5 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8392817..8393650 834..1 4170 100 Minus
3L 28110227 3L 8391658..8392365 114..818 2165 87.6 Plus
2L 23513712 2L 4949973..4950648 789..114 1730 83.7 Minus
3R 32079331 3R 30487110..30487524 780..363 540 75.8 Minus
3R 32079331 3R 30489367..30489781 363..780 510 75.4 Plus
3R 32079331 3R 29923800..29924214 780..363 495 75.1 Minus
3R 32079331 3R 29922615..29923029 363..780 480 74.9 Plus
2L 23513712 2L 4954323..4954758 793..355 445 74.5 Minus
2L 23513712 2L 4954815..4955009 316..128 400 81.5 Minus
2R 25286936 2R 8691843..8691968 355..480 315 83.3 Plus
3L 28110227 3L 6053938..6054145 480..273 290 76 Minus
3R 32079331 3R 29924350..29924523 248..81 280 78.7 Minus
3L 28110227 3L 6052750..6052857 355..462 270 83.3 Plus
3R 32079331 3R 29922306..29922479 81..248 265 78.2 Plus
2L 23513712 2L 4952294..4952469 780..605 250 76.1 Minus
2L 23513712 2L 4952785..4952996 316..114 245 75.5 Minus
3R 32079331 3R 30489090..30489231 113..248 225 78.9 Plus
Blast to na_te.dros performed on 2019-03-15 14:28:07 has no hits.

MIP19787.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:28:52 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8384842..8385672 1..831 100   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-06-03 13:35:55 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..789 5..793 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:30:07 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..789 5..793 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:59:30 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..789 5..793 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-06-03 13:35:55 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..792 2..793 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:30:07 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..830 2..831 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:59:30 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
Jon66Cii-RA 1..830 2..831 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:52 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8392820..8393650 1..831 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:52 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8392820..8393650 1..831 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:28:52 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8392820..8393650 1..831 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:30:07 Download gff for MIP19787.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8385920..8386750 1..831 100   Minus

MIP19787.hyp Sequence

Translation from 0 to 792

> MIP19787.hyp
NMKAFIAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEG
KAPYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVTVYFGATWRTN
AQFTHWVGNGNFIKHSSADIALIRIPHVDFWHMVNKVELPSYNDRYNDYN
EWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECSGYYGSVGDNILCVR
TPDGKSTCGGDSGGPLVTHDGTKLVGVTNFGSVAGCQSGAPAGFQRVTYH
LDWIRDHTGIAYY*

MIP19787.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:54:22
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-PA 262 CG7170-PA 1..262 2..263 1464 100 Plus
Jon66Ci-PA 260 CG7118-PA 1..260 2..263 1198 82.2 Plus
Jon25Biii-PA 258 CG8871-PA 1..258 2..262 1192 83.5 Plus
Jon99Ciii-PB 265 CG31362-PB 1..265 2..262 926 65.6 Plus
Jon99Ciii-PA 265 CG31362-PA 1..265 2..262 926 65.6 Plus

MIP19787.pep Sequence

Translation from 1 to 792

> MIP19787.pep
NMKAFIAILALAVASASGATMPRLATEKLTPVHTKDMQGRITNGYPAEEG
KAPYTVGLGFSGGWWCGGSIIAHDWVLTAEHCIGDADSVTVYFGATWRTN
AQFTHWVGNGNFIKHSSADIALIRIPHVDFWHMVNKVELPSYNDRYNDYN
EWWAVACGWGGTYDGSPLPDYLQCVDLQIIHNSECSGYYGSVGDNILCVR
TPDGKSTCGGDSGGPLVTHDGTKLVGVTNFGSVAGCQSGAPAGFQRVTYH
LDWIRDHTGIAYY*

MIP19787.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:19:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24394-PA 260 GF24394-PA 22..260 32..262 1078 84.9 Plus
Dana\GF21539-PA 258 GF21539-PA 25..258 28..262 1077 85.5 Plus
Dana\GF21537-PA 258 GF21537-PA 1..258 2..262 1032 78.2 Plus
Dana\GF21534-PA 268 GF21534-PA 1..268 2..263 848 64.1 Plus
Dana\GF10111-PA 186 GF10111-PA 20..186 98..262 847 94 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14309-PA 260 GG14309-PA 22..260 32..263 1084 86.2 Plus
Dere\GG24338-PA 258 GG24338-PA 30..258 34..262 1083 87.8 Plus
Dere\GG24336-PA 266 GG24336-PA 15..266 25..263 878 69.2 Plus
Dere\GG11987-PA 265 GG11987-PA 22..265 27..262 830 66.1 Plus
Dere\GG11709-PA 265 GG11709-PA 22..265 27..262 830 66.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15026-PA 259 GH15026-PA 22..259 32..262 971 76.5 Plus
Dgri\GH16447-PA 265 GH16447-PA 1..265 2..263 929 67.2 Plus
Dgri\GH16448-PA 267 GH16448-PA 30..267 31..263 876 68.9 Plus
Dgri\GH15028-PA 268 GH15028-PA 1..268 2..262 828 59.1 Plus
Dgri\GH16311-PA 263 GH16311-PA 18..263 27..263 661 56 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
Jon66Cii-PA 262 CG7170-PA 1..262 2..263 1464 100 Plus
Jon66Ci-PA 260 CG7118-PA 1..260 2..263 1198 82.2 Plus
Jon25Biii-PA 258 CG8871-PA 1..258 2..262 1192 83.5 Plus
Jon99Cii-PA 265 CG31034-PA 1..265 2..262 926 65.6 Plus
Jon99Ciii-PB 265 CG31362-PB 1..265 2..262 926 65.6 Plus
Jon99Ciii-PA 265 CG31362-PA 1..265 2..262 926 65.6 Plus
Jon25Bi-PB 266 CG8867-PB 1..266 2..263 920 65.9 Plus
Jon99Fii-PA 267 CG2229-PA 1..267 2..262 905 64 Plus
Jon99Fi-PA 267 CG18030-PA 4..267 6..262 901 63.8 Plus
Jon44E-PB 271 CG8579-PB 1..271 2..262 839 58 Plus
Jon44E-PA 271 CG8579-PA 1..271 2..262 839 58 Plus
Jon25Bii-PB 276 CG8869-PB 1..276 2..262 839 57.1 Plus
Jon25Bii-PA 276 CG8869-PA 1..276 2..262 839 57.1 Plus
Jon65Ai-PB 262 CG10475-PB 1..262 2..262 833 56.8 Plus
Jon65Ai-PA 262 CG10475-PA 1..262 2..262 833 56.8 Plus
Jon65Aii-PA 259 CG6580-PA 21..259 31..262 745 58.6 Plus
Jon99Ci-PA 272 CG31039-PA 4..272 6..262 677 48.4 Plus
CG18180-PA 264 CG18180-PA 1..264 2..262 639 49.6 Plus
Jon65Aiii-PA 274 CG6483-PA 4..274 6..262 623 46.7 Plus
CG8329-PA 259 CG8329-PA 35..259 41..263 622 52 Plus
CG18179-PA 268 CG18179-PA 1..268 2..262 622 49.6 Plus
CG3088-PA 252 CG3088-PA 1..252 2..262 597 45.5 Plus
yip7-PA 270 CG6457-PA 1..270 2..260 591 48.6 Plus
CG10477-PB 272 CG10477-PB 1..272 2..262 548 43.9 Plus
CG10477-PA 272 CG10477-PA 1..272 2..262 548 43.9 Plus
Jon65Aiv-PA 271 CG6467-PA 3..271 5..260 542 46.3 Plus
CG10472-PA 290 CG10472-PA 45..285 39..260 419 41.5 Plus
CG7542-PB 270 CG7542-PB 22..263 36..257 418 41.7 Plus
CG7542-PA 270 CG7542-PA 22..263 36..257 418 41.7 Plus
CG6592-PA 438 CG6592-PA 110..364 27..261 345 36.7 Plus
Jon74E-PC 271 CG6298-PC 30..270 39..262 339 35.4 Plus
CG11529-PA 287 CG11529-PA 40..260 51..259 306 33.6 Plus
epsilonTry-PA 256 CG18681-PA 5..249 7..254 283 34.5 Plus
CG6462-PA 319 CG6462-PA 70..317 34..260 283 34.8 Plus
CG8952-PA 276 CG8952-PA 34..275 37..261 262 33.2 Plus
CG31954-PA 277 CG31954-PA 47..277 37..260 249 31 Plus
CG3355-PA 314 CG3355-PA 75..311 40..263 248 32.7 Plus
alphaTry-PA 256 CG18444-PA 4..249 6..254 244 32.1 Plus
sphinx2-PC 253 CG32382-PC 1..253 2..262 240 26.4 Plus
sphinx2-PB 253 CG32382-PB 1..253 2..262 240 26.4 Plus
Ser6-PA 259 CG2071-PA 12..259 4..260 240 29.3 Plus
l(2)k05911-PC 639 CG31728-PC 397..634 38..254 236 30.7 Plus
CG1304-PA 260 CG1304-PA 20..259 31..260 234 29.5 Plus
CG11912-PA 271 CG11912-PA 1..267 2..257 234 29.7 Plus
sphinx1-PB 253 CG32383-PB 1..253 2..262 231 25.3 Plus
CG32270-PA 259 CG32270-PA 30..254 40..257 230 29.6 Plus
gammaTry-PA 253 CG30028-PA 6..249 8..254 229 31.4 Plus
CG30025-PA 253 CG30025-PA 6..249 8..254 229 31.4 Plus
deltaTry-PA 253 CG12351-PA 6..249 8..254 229 31.4 Plus
CG30031-PA 253 CG30031-PA 6..249 8..254 229 31.4 Plus
CG11836-PI 281 CG11836-PI 44..273 40..257 228 30.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16705-PA 258 GI16705-PA 1..258 2..263 1111 81.4 Plus
Dmoj\GI16680-PA 259 GI16680-PA 1..259 2..263 1080 79.6 Plus
Dmoj\GI16704-PA 264 GI16704-PA 19..264 29..263 878 69.6 Plus
Dmoj\GI16703-PA 264 GI16703-PA 22..264 32..263 838 68.4 Plus
Dmoj\GI16681-PA 269 GI16681-PA 1..269 2..262 816 59.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24701-PA 239 GL24701-PA 1..239 32..262 1095 86.6 Plus
Dper\GL19488-PA 258 GL19488-PA 1..258 2..262 1078 82 Plus
Dper\GL26493-PA 265 GL26493-PA 15..265 25..262 840 67.1 Plus
Dper\GL26494-PA 276 GL26494-PA 1..276 2..262 829 59.9 Plus
Dper\GL13498-PA 265 GL13498-PA 22..265 27..262 821 65.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20115-PA 260 GA20115-PA 22..260 32..262 1096 86.6 Plus
Dpse\GA21381-PA 258 GA21381-PA 1..258 2..262 1078 82 Plus
Dpse\GA21379-PA 265 GA21379-PA 15..265 25..262 840 67.1 Plus
Dpse\GA21380-PA 276 GA21380-PA 1..276 2..262 828 59.9 Plus
Dpse\GA26868-PA 265 GA26868-PA 22..265 27..262 821 65.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24943-PA 262 GM24943-PA 1..262 2..263 1380 98.5 Plus
Dsec\GM25051-PA 260 GM25051-PA 22..260 32..263 1077 85.4 Plus
Dsec\GM18058-PA 252 GM18058-PA 1..252 2..262 996 77 Plus
Dsec\GM13875-PA 262 GM13875-PA 1..262 2..262 808 57.6 Plus
Dsec\GM12839-PA 244 GM12839-PA 22..244 27..262 746 62.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:19:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12995-PA 235 GD12995-PA 1..224 2..225 1089 90.6 Plus
Dsim\GD22678-PA 223 GD22678-PA 1..211 2..215 865 81.8 Plus
Dsim\GD22676-PA 266 GD22676-PA 15..266 25..263 859 67.6 Plus
Dsim\GD11965-PA 265 GD11965-PA 22..265 27..262 840 66.9 Plus
Dsim\GD17046-PA 269 GD17046-PA 26..269 27..262 839 65.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12443-PA 257 GJ12443-PA 1..257 2..262 1108 82.5 Plus
Dvir\GJ11121-PA 258 GJ11121-PA 22..258 32..262 960 82.8 Plus
Dvir\GJ12931-PA 258 GJ12931-PA 22..258 32..262 960 82.8 Plus
Dvir\GJ12444-PA 266 GJ12444-PA 24..266 32..263 891 70.4 Plus
Dvir\GJ11123-PA 281 GJ11123-PA 1..281 2..263 889 64.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17283-PA 263 GK17283-PA 32..263 34..263 1091 87.1 Plus
Dwil\GK17287-PA 262 GK17287-PA 27..262 32..262 1028 81.9 Plus
Dwil\GK16895-PA 259 GK16895-PA 22..259 32..262 928 75.3 Plus
Dwil\GK16897-PA 259 GK16897-PA 22..259 32..262 924 74.9 Plus
Dwil\GK17282-PA 259 GK17282-PA 22..259 32..262 924 74.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21311-PA 264 GE21311-PA 1..264 2..263 1352 95.8 Plus
Dyak\GE18717-PA 258 GE18717-PA 1..258 2..262 1090 83.5 Plus
Dyak\GE20738-PA 260 GE20738-PA 22..260 32..263 1087 86.7 Plus
Dyak\GE23384-PA 265 GE23384-PA 22..265 27..262 836 66.5 Plus
Dyak\Ser4-PA 266 GE18715-PA 15..266 25..263 834 65.6 Plus