MIP20232.complete Sequence
624 bp assembled on 2010-03-31
GenBank Submission: BT122169.1
> MIP20232.complete
ATTTTTCATAATATTTTGACAGCTTAATCACTTCGAATTCACTACTAACT
ACTAATCAATGATAAGATTTAAATCTAAATTCTATTCATATACATAATTT
CTTTACTGTTTCCTTACTTTATGAAGAATGCAGTTTCTGGTTTCTAATAT
TCAAAATGATTTTAACCCTTTGATTTCTGCCTGTGCAGCTGCAACCCCCT
CTTGGCCTATAACTTATGTAGTTCAAGCGAGATAAAATCCATCTTCCATG
GTGTTTATGGGCCTGCTTTATGCTGCCATCCACAGAGGTCCTCCGGCGAT
GGCGTGTATCTTGTATCTGCAGATGCAGTACGGCCTGCAACAACAGCGTC
AACGTGGCATGCAAAATTGATGGTTTCGTTGGATGTTTGGGTTGGGTTGT
GGGGATTAAGTGGCTGCTTTATGGGCGACCAAGGAGCAGGACATCCAGGG
AGCTAAAAACGTAGGACCGATTACAGCCTGGCGGGAGCAAATTTAATATC
AGAAATCAATCTTGTGGCTCTTCAATCAATGGATCAAAGTGCCTGATACG
GCACGGTCTGTTAACAATTTCCTTTTGGCCTTACTTCACAAATAAAGCAA
AAAAAAAAAAAAAAAAAAAAAAAA
MIP20232.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:38:20 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:14:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 13735722..13736040 | 1..319 | 1565 | 99.4 | Plus |
| chr3R | 27901430 | chr3R | 13736112..13736391 | 319..598 | 1370 | 99.3 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:22:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:14:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17911376..17911694 | 1..319 | 1565 | 99.4 | Plus |
| 3R | 32079331 | 3R | 17911766..17912061 | 319..614 | 1390 | 98 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:54:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 17652207..17652525 | 1..319 | 1565 | 99.3 | Plus |
| 3R | 31820162 | 3R | 17652597..17652892 | 319..614 | 1390 | 97.9 | Plus |
Blast to na_te.dros performed on 2019-03-15 21:14:50 has no hits.
MIP20232.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:15:57 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 13735722..13736040 | 1..319 | 99 | -> | Plus |
| chr3R | 13736113..13736391 | 320..598 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:41:39 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43445-RA | 1..195 | 270..464 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:47:26 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43445-RA | 1..195 | 270..464 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:41:39 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43445-RA | 1..598 | 1..598 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:47:26 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43445-RA | 1..598 | 1..598 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:15:57 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17911376..17911694 | 1..319 | 99 | -> | Plus |
| 3R | 17911767..17912045 | 320..598 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:15:57 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17911376..17911694 | 1..319 | 99 | -> | Plus |
| 3R | 17911767..17912045 | 320..598 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:15:57 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17911376..17911694 | 1..319 | 99 | -> | Plus |
| 3R | 17911767..17912045 | 320..598 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:41:39 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13737098..13737416 | 1..319 | 99 | -> | Plus |
| arm_3R | 13737489..13737767 | 320..598 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:35:34 Download gff for
MIP20232.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17652207..17652525 | 1..319 | 99 | -> | Plus |
| 3R | 17652598..17652876 | 320..598 | 99 | | Plus |
MIP20232.pep Sequence
Translation from 269 to 463
> MIP20232.pep
MLPSTEVLRRWRVSCICRCSTACNNSVNVACKIDGFVGCLGWVVGIKWLL
YGRPRSRTSRELKT*
MIP20232.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43445-PA | 64 | CG43445-PA | 1..64 | 1..64 | 354 | 100 | Plus |
MIP20232.hyp Sequence
Translation from 269 to 463
> MIP20232.hyp
MLPSTEVLRRWRVSCICRCSTACNNSVNVACKIDGFVGCLGWVVGIKWLL
YGRPRSRTSRELKT*
MIP20232.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:07:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43445-PA | 64 | CG43445-PA | 1..64 | 1..64 | 354 | 100 | Plus |
