Clone Sequence Records
MIP20311.complete Sequence
469 bp assembled on 2010-03-28
GenBank Submission: BT122147.1
> MIP20311.complete
ATCGGATGATGAATGATAAATTCTGGCATTTCCCTGTCCACGACAAACGT
ATGCTACACGAACTGCACTTTTGCAACTAATTATGTCCGCTCATTATTAA
CCCCGCTGTCGAGTCAACAAGAGAAGTCATTCTTGACATCCCAGAAAAGG
AAAAGGGAACGGAAAAGCGAGAGGGCAGTGGAAAAAACCAAGCAAACATG
CTTTTGTCATTTGCGCAAATTAATGCACGACAGTTGGGAAAGAGTAGGGA
CGAGGAAAGCGAGGGGCTTACAAAAAGCAGATGCTGCTTATTTGGATAGC
TCTTAGGGAAGGTCAACGGTATATGGCTAGTCTCGTCCTTTTTTTAATTT
ATTGCCTCGGCAACACGAGGAAGCAAATCCTTGAGTCGTACCAAAATTAT
GACGTGAAAATACTTTTCTGAACTGAAAGTAAAATATTTTTCAAATATTT
AAAAAAAAAAAAAAAAAAA
MIP20311.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:38:03 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:02:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 18250323..18250581 | 191..450 | 1250 | 99.6 | Plus |
chr2L | 23010047 | chr2L | 18250079..18250270 | 1..192 | 960 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 20:22:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:02:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18251651..18251916 | 191..457 | 1270 | 99.3 | Plus |
2L | 23513712 | 2L | 18251407..18251598 | 1..192 | 960 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:54:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 18251651..18251916 | 191..457 | 1280 | 99.2 | Plus |
2L | 23513712 | 2L | 18251407..18251598 | 1..192 | 960 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 22:02:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Juan | 4236 | Juan JUAN 4236bp | 402..456 | 396..448 | 108 | 69.1 | Plus |
MIP20311.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:03:24 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 18250325..18250581 | 193..450 | 99 | | Plus |
chr2L | 18250079..18250270 | 1..192 | 100 | -> | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:06:58 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43406-RA | 1..294 | 13..306 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:06:58 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43406-RA | 27..475 | 1..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:24 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18251407..18251598 | 1..192 | 100 | -> | Plus |
2L | 18251653..18251909 | 193..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:24 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18251407..18251598 | 1..192 | 100 | -> | Plus |
2L | 18251653..18251909 | 193..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:03:24 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18251407..18251598 | 1..192 | 100 | -> | Plus |
2L | 18251653..18251909 | 193..450 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:06:58 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 18251407..18251598 | 1..192 | 100 | -> | Plus |
arm_2L | 18251653..18251909 | 193..450 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:35:00 Download gff for
MIP20311.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 18251653..18251909 | 193..450 | 99 | | Plus |
2L | 18251407..18251598 | 1..192 | 100 | -> | Plus |
MIP20311.pep Sequence
Translation from 12 to 305
> MIP20311.pep
MINSGISLSTTNVCYTNCTFATNYVRSLLTPLSSQQEKSFLTSQKRKRER
KSERAVEKTKQTCFCHLRKLMHDSWERVGTRKARGLQKADAAYLDSS*
Sequence MIP20311.pep has no blast hits.
MIP20311.hyp Sequence
Translation from 12 to 305
> MIP20311.hyp
MINSGISLSTTNVCYTNCTFATNYVRSLLTPLSSQQEKSFLTSQKRKRER
KSERAVEKTKQTCFCHLRKLMHDSWERVGTRKARGLQKADAAYLDSS*
Sequence MIP20311.hyp has no blast hits.