Clone MIP21654 Report

Search the DGRC for MIP21654

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:216
Well:54
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG32032-RA
Protein status:MIP21654.pep: gold
Sequenced Size:1068

Clone Sequence Records

MIP21654.complete Sequence

1068 bp assembled on 2011-05-10

GenBank Submission: BT128694.1

> MIP21654.complete
CATTCAGTGGCTCTTATCGGTAGAAACAGCAGCACTTTTCCGAGATGTCT
ATCAAATCCTTGACATACGTTGCGATCTTTGGCCTTTTTTGGGGCTCAAT
TGCGGGAACTGTAGTTGATCAGTTTGGGATATATGGTGGTTCACCGATTA
CCACCACGGAAAGGAGTAATGCGGAGTTGCGCTGCATGAACATCAATCCG
CAGAACTCGGTGGACTTGGAGCAGATGATGGGACTCTGGTACGGCAGCGA
GATTATCGTGCACAGCCAAGATTTTCCGGGCACCTACGAGTACGACTCAT
GTGTCATCATTCATCTGACCGATGCCACGGATCAGATCCGTTTGAGCCAA
GCAAATCGCGGCTATGGCTATGGAAATCAGGACTACAACCGTAACCAGAA
TAACTATGGACGCACCACCACCACTCAATCCTCCTATCCGGATAGCGATG
AGTACCCGTTGAGATCGATTCAAAGCCAGCAGAAGTACCTACGTTTGATT
TGGAGTGAGCGTGATAACAATCTGGAGTATACTTTCAACTATACCACCAG
TGCACCTGGTCAGTGGTCCAACATCGGCGATCAGCGGGGATCCTTGGTCA
CCCTGAACACGTACACCCAGTTCACGGGCACTGTCCAGGTGGTGAAAGCG
GTCAACGATCACCTGGTGCTGACCTTCTGCGGCAACGATGTTAAGAGCTC
CATATACACAGTGGTTCTCACCCGCAATCGCCTTGGTCTCAGTTTAGATG
AGCTGCGTAGCATCAGGAATCTGCTTTCCCGCCGTGGACTCTACACGGAG
ACCATTCGCAAGGTTTGCAATGGATGTGGGCGATTGGGTGGCAGCCTCTT
CGCTCTTTTAGCCCTTTTGCTGGTCGTACGTTTGGCCTGGGGGCGTGGCC
AGTGAGCTGGAGGGGATCGTCAGAGTGTCGAAGTACAGCCGGCGTATTTA
ATGAGTCCAGCCATATTACGTTAATTTATGTATAATTTTCCCATAAGCAA
TACACAAGCGAGATCGCCGAGTGCTCTCCCCGAAAACTAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

MIP21654.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:36:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9085716..9086133 333..750 2060 99.5 Plus
chr3L 24539361 chr3L 9086502..9086790 750..1038 1280 96.2 Plus
chr3L 24539361 chr3L 9085014..9085237 1..224 1105 99.6 Plus
chr3L 24539361 chr3L 9085544..9085663 223..342 555 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:36:19
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9093790..9094207 333..750 2090 100 Plus
3L 28110227 3L 9094569..9094859 750..1040 1455 100 Plus
3L 28110227 3L 9093088..9093311 1..224 1120 100 Plus
3L 28110227 3L 9093618..9093737 223..342 570 98.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9086890..9087307 333..750 2090 100 Plus
3L 28103327 3L 9087669..9087959 750..1040 1455 100 Plus
3L 28103327 3L 9086188..9086411 1..224 1120 100 Plus
3L 28103327 3L 9086718..9086837 223..342 570 98.3 Plus
Blast to na_te.dros performed on 2019-03-15 10:36:20 has no hits.

MIP21654.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:37:18 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9085014..9085237 1..224 99 -> Plus
chr3L 9085546..9085656 225..335 99 -> Plus
chr3L 9085719..9086132 336..749 99 -> Plus
chr3L 9086502..9086790 750..1038 96   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-05-10 16:59:22 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 1..861 45..905 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:21:22 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 1..861 45..905 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:08:02 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 1..861 45..905 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-05-10 16:59:22 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 35..1071 1..1037 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:21:22 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 36..1072 1..1037 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:02 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
CG32032-RA 36..1072 1..1037 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:18 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9093620..9093730 225..335 100 -> Plus
3L 9093088..9093311 1..224 100 -> Plus
3L 9093793..9094206 336..749 100 -> Plus
3L 9094569..9094857 750..1038 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:18 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9093620..9093730 225..335 100 -> Plus
3L 9093088..9093311 1..224 100 -> Plus
3L 9093793..9094206 336..749 100 -> Plus
3L 9094569..9094857 750..1038 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:37:18 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9093620..9093730 225..335 100 -> Plus
3L 9093088..9093311 1..224 100 -> Plus
3L 9093793..9094206 336..749 100 -> Plus
3L 9094569..9094857 750..1038 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:21:22 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9086720..9086830 225..335 100 -> Plus
arm_3L 9086188..9086411 1..224 100 -> Plus
arm_3L 9086893..9087306 336..749 100 -> Plus
arm_3L 9087669..9087957 750..1038 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:06:55 Download gff for MIP21654.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9086188..9086411 1..224 100 -> Plus
3L 9086720..9086830 225..335 100 -> Plus
3L 9086893..9087306 336..749 100 -> Plus
3L 9087669..9087957 750..1038 100   Plus

MIP21654.pep Sequence

Translation from 44 to 904

> MIP21654.pep
MSIKSLTYVAIFGLFWGSIAGTVVDQFGIYGGSPITTTERSNAELRCMNI
NPQNSVDLEQMMGLWYGSEIIVHSQDFPGTYEYDSCVIIHLTDATDQIRL
SQANRGYGYGNQDYNRNQNNYGRTTTTQSSYPDSDEYPLRSIQSQQKYLR
LIWSERDNNLEYTFNYTTSAPGQWSNIGDQRGSLVTLNTYTQFTGTVQVV
KAVNDHLVLTFCGNDVKSSIYTVVLTRNRLGLSLDELRSIRNLLSRRGLY
TETIRKVCNGCGRLGGSLFALLALLLVVRLAWGRGQ*

MIP21654.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10855-PA 293 GF10855-PA 5..293 4..286 1041 77 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:50:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14373-PA 258 GG14373-PA 1..258 29..286 1193 92.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15576-PA 279 GH15576-PA 1..277 1..284 838 64.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:03:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG32032-PA 286 CG32032-PA 1..286 1..286 1502 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:50:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16852-PA 257 GI16852-PA 5..234 36..264 818 70 Plus
Dmoj\GI16018-PA 183 GI16018-PA 1..182 62..242 610 68.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15039-PA 282 GL15039-PA 1..282 1..286 1051 74.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16625-PA 282 GA16625-PA 1..282 1..286 1051 74.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:50:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25118-PA 286 GM25118-PA 1..286 1..286 1362 94.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14153-PA 286 GD14153-PA 1..286 1..286 1369 95.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12602-PA 394 GJ12602-PA 2..287 3..284 876 65.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:50:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23676-PA 291 GK23676-PA 3..280 5..273 903 64.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:50:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20805-PA 286 GE20805-PA 1..286 1..286 1339 93.4 Plus

MIP21654.hyp Sequence

Translation from 44 to 904

> MIP21654.hyp
MSIKSLTYVAIFGLFWGSIAGTVVDQFGIYGGSPITTTERSNAELRCMNI
NPQNSVDLEQMMGLWYGSEIIVHSQDFPGTYEYDSCVIIHLTDATDQIRL
SQANRGYGYGNQDYNRNQNNYGRTTTTQSSYPDSDEYPLRSIQSQQKYLR
LIWSERDNNLEYTFNYTTSAPGQWSNIGDQRGSLVTLNTYTQFTGTVQVV
KAVNDHLVLTFCGNDVKSSIYTVVLTRNRLGLSLDELRSIRNLLSRRGLY
TETIRKVCNGCGRLGGSLFALLALLLVVRLAWGRGQ*

MIP21654.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:21:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG32032-PA 286 CG32032-PA 1..286 1..286 1502 100 Plus