Clone MIP22288 Report

Search the DGRC for MIP22288

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:222
Well:88
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG7115-RC
Protein status:MIP22288.pep: gold
Sequenced Size:2010

Clone Sequence Records

MIP22288.complete Sequence

2010 bp assembled on 2010-06-25

GenBank Submission: BT125041.1

> MIP22288.complete
TTTTAGTTCTTCTGCGCGTCGCGTGCGGCTTGTTTTTGTTTTTAATTTTC
GTCCAAATAATTTTCCACATTTTTTTTTCGGGGGCCAGAGGTTCTTTTAA
AACCGGAAGTTGTTACGAATGGATCACCGTTACAGAAGATCGTTAAGGAG
CTCAGCAGATGTGTGGAGTCGCAGCATCCTGGGACGCATCCAGGCAACCC
TCGGTCGCCAGAAGGCCGTCAAGATGATGGAGCTGTCGGCCAGTGCTGGT
GATCACCAGAGCTGGGAGGAGATGAAGCAGCAGAGCTCGGCCTTCGCGGT
CCTGGGACGCAGGCCAAGAATGGAGGATAGGTTTATTATCGAGGAGAACA
TCAACAACAACACTGGTATCTCCTTCTTTGCCGTATTTGACGGTCATGGC
GGCGAGTTTGCCGCAGACTTCGCCAAGGATGTGCTGGTGAAGAACATCTA
CAATAAGATCATCGAGATGTCCAAGCTTCTGAAGACGGAAGGAAATTCCG
GAGATTACGATAAGAGTCCCTATTTAGCGCGCAAGCAGAGTCGCAAGGAT
GCAAACAAGGAGAACACAGAACCGACGGCAGGGGTGATGCGAAAGGATAG
TCTAAGGAAGGCCCACAGCACCACGGCGGATTGTAGTGCTATTAAGCAAA
AGACAACCGAGGCATCCATTGCCGACATCTACACAGTCCAATTAAACTCG
GCGATGAGAGCCAGTGGGAATTTGGGAGCCGCCAAGGATTCCTTCCTCAA
CAACAACAACAACGGACAGAACGGAGCAGCCAATGCGCCACCTCCAAACT
ACGAAGCCAAGTGCTACATCGAACACGGACGTATTAACTTTGGTAAACTG
ATCACGGACGAGATCATGTCGGCCGACTACAAGCTTGTGGAGCAGGCCAA
GAGAGCGACCAACATTGCGGGAACCACCGCTCTAATAGCGATAGTTCAGG
GCTCAAAGCTGATTGTGGCCAATGTGGGCGACTCCCGCGGAGTCATGTAC
GACTGGCGTGGAATCGCCATACCGCTTTCATTCGATCACAAGCCGCAGCA
AGTGCGAGAACGAAAGAGAATCCACGATGCAGGCGGATTCATCGCCTTCC
GAGGCGTTTGGCGTGTGGCCGGGGTGTTGGCCACGTCACGTGCTCTAGGG
GACTATCCGCTTAAAGATAAGAATCTGGTGATTGCTACGCCGGACATTTT
GACCTTCGAACTAAACGATCACAAACCCCATTTTCTGATACTGGCATCCG
ATGGGCTGTGGGACACGTTCAGCAATGAGGAGGCCTGCACTTTTGCGTTG
GAGCATCTGAAAGAGCCGGACTTTGGCGCCAAATCACTTGCCATGGAGTC
GTATAAACGTGGCTCCGTGGACAACATCACCGTGCTGGTGATCGTCTTCA
AGAACGATGTCTACAAGATTGGCAGCTCAGCGGGAAAAGCGGGAGAAGAA
TCCCTAAAAGTCCCAGCCAAATCTCAACCAGTTGCGCCTGCAGTTGTGCA
ACGCTCGAATTCAATCAAAACCAAATGAAAAACGATAGATAAGAGTGCCT
GCTAAGAAATGCTCTTCAGCTTTTCTCCTAAAAATTTCCTTCTCCCCAAG
AAAAACAAACGAAAGTGCCCGAATTTTTCTAGTTAGGCATTTTGCTAAAT
ACCTTTTGACCTTTTTGTTACTTGTCCAAAGGCAGCGTTCATTCATCCCA
TTACAGACATGCATACACATTCATCACTCGAAAATGCGTTCATCATTTGT
CTTAATATTAAGGTTGTTTGTTAGTCAATGTTGTTTTGTTTAAACAAAAT
ATGTTTGCATCCGCCGCCACATTGCCGTGCACTCCGTTTTTCCAATTCGC
ACACGAAAATCATCACAGTCACTGACTCAGTCAGGGTAACATCATCACGT
AACTATTTATTTAATTTATTTGTTATACGTGTAAAAGAAAACATTTTCTA
AATGTCGAAATGTTTTTACGAATAAAACAATGCATACGAAACGAAAAAAA
AAAAAAAAAA

MIP22288.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:40:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG7115-RB 2265 CG7115-RB 401..2238 157..1994 9190 100 Plus
CG7115-RA 2673 CG7115-RA 809..2646 157..1994 9190 100 Plus
CG7115.a 2604 CG7115.a 740..2577 157..1994 9190 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:25:07
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7823658..7824426 1225..1993 3845 100 Plus
chr2L 23010047 chr2L 7822527..7823106 328..907 2900 100 Plus
chr2L 23010047 chr2L 7823165..7823429 907..1171 1325 100 Plus
chr2L 23010047 chr2L 7822005..7822181 157..333 885 100 Plus
chr2L 23010047 chr2L 7820229..7820386 1..158 790 100 Plus
chr2L 23010047 chr2L 7823504..7823558 1170..1224 275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7824580..7825349 1225..1994 3850 100 Plus
2L 23513712 2L 7823449..7824028 328..907 2900 100 Plus
2L 23513712 2L 7824087..7824351 907..1171 1325 100 Plus
2L 23513712 2L 7822927..7823103 157..333 885 100 Plus
2L 23513712 2L 7821151..7821308 1..158 790 100 Plus
2L 23513712 2L 7824426..7824480 1170..1224 275 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7824580..7825349 1225..1994 3850 100 Plus
2L 23513712 2L 7823449..7824028 328..907 2900 100 Plus
2L 23513712 2L 7824087..7824351 907..1171 1325 100 Plus
2L 23513712 2L 7822927..7823103 157..333 885 100 Plus
2L 23513712 2L 7821151..7821308 1..158 790 100 Plus
2L 23513712 2L 7824426..7824480 1170..1224 275 100 Plus
Blast to na_te.dros performed 2019-03-16 05:25:05
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy7 5486 gypsy7 GYPSY7 5486bp 3941..4019 1972..1899 121 67.1 Minus

MIP22288.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:26:10 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7823506..7823558 1172..1224 100 -> Plus
chr2L 7820229..7820386 1..158 100 -> Plus
chr2L 7822007..7822178 159..330 100 -> Plus
chr2L 7822530..7823106 331..907 100 -> Plus
chr2L 7823166..7823429 908..1171 100 -> Plus
chr2L 7823658..7824426 1225..1993 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-06-25 09:09:22 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RB 198..1575 149..1528 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:37:29 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RB 198..1575 149..1528 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:19:06 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RC 1..1410 119..1528 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:04:54 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RC 1..1410 119..1528 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-25 09:09:22 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RB 395..2237 149..1993 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:37:29 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RB 395..2237 149..1993 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:19:06 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RC 1..1993 1..1993 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:04:54 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
CG7115-RC 1..1993 1..1993 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:10 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7821151..7821308 1..158 100 -> Plus
2L 7822929..7823100 159..330 100 -> Plus
2L 7823452..7824028 331..907 100 -> Plus
2L 7824088..7824351 908..1171 100 -> Plus
2L 7824428..7824480 1172..1224 100 -> Plus
2L 7824580..7825348 1225..1993 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:10 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7821151..7821308 1..158 100 -> Plus
2L 7822929..7823100 159..330 100 -> Plus
2L 7823452..7824028 331..907 100 -> Plus
2L 7824088..7824351 908..1171 100 -> Plus
2L 7824428..7824480 1172..1224 100 -> Plus
2L 7824580..7825348 1225..1993 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:26:10 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7821151..7821308 1..158 100 -> Plus
2L 7822929..7823100 159..330 100 -> Plus
2L 7823452..7824028 331..907 100 -> Plus
2L 7824088..7824351 908..1171 100 -> Plus
2L 7824428..7824480 1172..1224 100 -> Plus
2L 7824580..7825348 1225..1993 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:19:06 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7822929..7823100 159..330 100 -> Plus
arm_2L 7821151..7821308 1..158 100 -> Plus
arm_2L 7823452..7824028 331..907 100 -> Plus
arm_2L 7824088..7824351 908..1171 100 -> Plus
arm_2L 7824428..7824480 1172..1224 100 -> Plus
arm_2L 7824580..7825348 1225..1993 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:40:11 Download gff for MIP22288.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7823452..7824028 331..907 100 -> Plus
2L 7824088..7824351 908..1171 100 -> Plus
2L 7824428..7824480 1172..1224 100 -> Plus
2L 7824580..7825348 1225..1993 100   Plus
2L 7821151..7821308 1..158 100 -> Plus
2L 7822929..7823100 159..330 100 -> Plus

MIP22288.hyp Sequence

Translation from 118 to 1527

> MIP22288.hyp
MDHRYRRSLRSSADVWSRSILGRIQATLGRQKAVKMMELSASAGDHQSWE
EMKQQSSAFAVLGRRPRMEDRFIIEENINNNTGISFFAVFDGHGGEFAAD
FAKDVLVKNIYNKIIEMSKLLKTEGNSGDYDKSPYLARKQSRKDANKENT
EPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQLNSAMRASG
NLGAAKDSFLNNNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLITDEIM
SADYKLVEQAKRATNIAGTTALIAIVQGSKLIVANVGDSRGVMYDWRGIA
IPLSFDHKPQQVRERKRIHDAGGFIAFRGVWRVAGVLATSRALGDYPLKD
KNLVIATPDILTFELNDHKPHFLILASDGLWDTFSNEEACTFALEHLKEP
DFGAKSLAMESYKRGSVDNITVLVIVFKNDVYKIGSSAGKAGEESLKVPA
KSQPVAPAVVQRSNSIKTK*

MIP22288.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 05:52:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG7115-PC 469 CG7115-PC 1..469 1..469 2400 100 Plus
CG7115-PD 471 CG7115-PD 1..471 1..469 2387 99.6 Plus
CG7115-PE 524 CG7115-PE 67..524 12..469 2335 99.6 Plus
CG7115-PB 524 CG7115-PB 67..524 12..469 2335 99.6 Plus
CG7115-PA 524 CG7115-PA 67..524 12..469 2335 99.6 Plus

MIP22288.pep Sequence

Translation from 118 to 1527

> MIP22288.pep
MDHRYRRSLRSSADVWSRSILGRIQATLGRQKAVKMMELSASAGDHQSWE
EMKQQSSAFAVLGRRPRMEDRFIIEENINNNTGISFFAVFDGHGGEFAAD
FAKDVLVKNIYNKIIEMSKLLKTEGNSGDYDKSPYLARKQSRKDANKENT
EPTAGVMRKDSLRKAHSTTADCSAIKQKTTEASIADIYTVQLNSAMRASG
NLGAAKDSFLNNNNNGQNGAANAPPPNYEAKCYIEHGRINFGKLITDEIM
SADYKLVEQAKRATNIAGTTALIAIVQGSKLIVANVGDSRGVMYDWRGIA
IPLSFDHKPQQVRERKRIHDAGGFIAFRGVWRVAGVLATSRALGDYPLKD
KNLVIATPDILTFELNDHKPHFLILASDGLWDTFSNEEACTFALEHLKEP
DFGAKSLAMESYKRGSVDNITVLVIVFKNDVYKIGSSAGKAGEESLKVPA
KSQPVAPAVVQRSNSIKTK*

MIP22288.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:51:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21820-PA 524 GF21820-PA 67..524 12..469 2215 93.7 Plus
Dana\GF23353-PA 371 GF23353-PA 94..284 239..427 277 35.7 Plus
Dana\GF24378-PA 374 GF24378-PA 97..288 249..430 255 33.2 Plus
Dana\GF20730-PA 366 GF20730-PA 104..278 258..427 243 36.5 Plus
Dana\GF14828-PA 432 GF14828-PA 263..424 267..428 242 36.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10499-PA 524 GG10499-PA 67..524 12..469 2352 95.2 Plus
Dere\GG11671-PA 374 GG11671-PA 94..284 239..427 274 34.7 Plus
Dere\GG21691-PA 428 GG21691-PA 259..420 267..428 250 37.7 Plus
Dere\GG14269-PA 370 GG14269-PA 87..287 240..430 245 32.2 Plus
Dere\GG10863-PA 664 GG10863-PA 394..601 267..463 243 33.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10360-PA 520 GH10360-PA 67..520 12..469 1912 82.7 Plus
Dgri\GH18902-PA 371 GH18902-PA 94..284 239..427 280 36.2 Plus
Dgri\GH15705-PA 335 GH15705-PA 96..288 249..430 238 32.5 Plus
Dgri\GH16235-PA 323 GH16235-PA 101..293 253..433 238 33.8 Plus
Dgri\GH23728-PA 302 GH23728-PA 9..208 267..453 230 33.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG7115-PC 469 CG7115-PC 1..469 1..469 2400 100 Plus
CG7115-PD 471 CG7115-PD 1..471 1..469 2387 99.6 Plus
CG7115-PE 524 CG7115-PE 67..524 12..469 2335 99.6 Plus
CG7115-PB 524 CG7115-PB 67..524 12..469 2335 99.6 Plus
CG7115-PA 524 CG7115-PA 67..524 12..469 2335 99.6 Plus
alph-PF 332 CG1906-PF 94..284 239..427 259 35.2 Plus
alph-PC 368 CG1906-PC 94..284 239..427 259 35.2 Plus
alph-PD 368 CG1906-PD 94..284 239..427 259 35.2 Plus
alph-PA 368 CG1906-PA 94..284 239..427 259 35.2 Plus
alph-PB 371 CG1906-PB 94..284 239..427 259 35.2 Plus
alph-PE 374 CG1906-PE 94..284 239..427 259 35.2 Plus
CG17746-PB 371 CG17746-PB 87..240 240..392 242 38.4 Plus
CG17746-PA 371 CG17746-PA 87..240 240..392 242 38.4 Plus
Ppm1-PA 352 CG12169-PA 101..284 253..425 236 33.3 Plus
CG10376-PA 428 CG10376-PA 259..420 267..428 227 36.5 Plus
CG6036-PA 371 CG6036-PA 119..300 268..446 225 33.3 Plus
CG10417-PB 662 CG10417-PB 392..574 267..437 225 34.8 Plus
CG10417-PA 662 CG10417-PA 392..574 267..437 225 34.8 Plus
Pp2C1-PB 1427 CG2984-PB 362..525 267..397 161 32.5 Plus
Pp2C1-PA 1427 CG2984-PA 362..525 267..397 161 32.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:51:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21350-PA 520 GI21350-PA 67..520 12..469 1874 81.2 Plus
Dmoj\GI23119-PA 371 GI23119-PA 94..284 239..427 292 36.7 Plus
Dmoj\GI12760-PA 328 GI12760-PA 83..301 235..437 252 31.9 Plus
Dmoj\GI22508-PA 444 GI22508-PA 270..436 261..428 243 39.7 Plus
Dmoj\GI20667-PA 747 GI20667-PA 447..638 267..445 242 33.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18645-PA 531 GL18645-PA 67..531 12..469 1959 83.9 Plus
Dper\GL13894-PA 370 GL13894-PA 94..283 239..427 278 35.2 Plus
Dper\GL22499-PA 319 GL22499-PA 59..247 215..397 258 35.1 Plus
Dper\GL21276-PA 375 GL21276-PA 97..288 249..430 256 33.7 Plus
Dper\GL22500-PA 319 GL22500-PA 97..247 249..397 248 36.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20114-PA 531 GA20114-PA 67..531 12..469 1954 83.7 Plus
Dpse\GA15122-PA 370 GA15122-PA 94..283 239..427 278 35.2 Plus
Dpse\GA24456-PA 319 GA24456-PA 59..247 215..397 259 35.1 Plus
Dpse\GA14642-PA 375 GA14642-PA 97..288 249..430 256 33.7 Plus
Dpse\GA24460-PA 319 GA24460-PA 97..247 249..397 247 36.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:51:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16598-PA 524 GM16598-PA 67..524 12..469 2410 98.3 Plus
Dsec\GM12795-PA 374 GM12795-PA 94..284 239..427 272 34.7 Plus
Dsec\GM13564-PA 319 GM13564-PA 94..284 239..427 262 34.2 Plus
Dsec\GM14062-PA 370 GM14062-PA 87..287 240..430 262 33.2 Plus
Dsec\GM14345-PA 353 GM14345-PA 97..293 249..433 248 33.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23491-PA 524 GD23491-PA 67..524 12..469 2403 98 Plus
Dsim\GD21442-PA 374 GD21442-PA 94..284 239..427 272 34.7 Plus
Dsim\GD13337-PA 370 GD13337-PA 87..287 240..430 263 33.2 Plus
Dsim\GD17616-PA 353 GD17616-PA 101..293 253..433 247 34.3 Plus
Dsim\GD21815-PA 428 GD21815-PA 259..420 267..428 234 36.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11141-PA 520 GJ11141-PA 67..520 12..469 1904 82 Plus
Dvir\GJ10608-PA 371 GJ10608-PA 94..284 239..427 291 36.7 Plus
Dvir\GJ15526-PA 329 GJ15526-PA 83..320 235..461 256 31 Plus
Dvir\GJ12915-PA 335 GJ12915-PA 101..292 253..432 244 34.5 Plus
Dvir\GJ20430-PA 446 GJ20430-PA 271..439 261..429 233 38.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14821-PA 546 GK14821-PA 67..546 12..469 1910 79.3 Plus
Dwil\GK23353-PA 67 GK23353-PA 1..67 264..330 305 88.1 Plus
Dwil\GK11903-PA 371 GK11903-PA 94..284 239..427 289 36.7 Plus
Dwil\GK24340-PA 443 GK24340-PA 272..435 266..428 277 40.8 Plus
Dwil\GK10468-PA 123 GK10468-PA 42..113 258..368 273 55.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14637-PA 524 GE14637-PA 67..524 12..469 2298 96.1 Plus
Dyak\GE23859-PA 374 GE23859-PA 94..284 239..427 274 34.7 Plus
Dyak\GE12714-PA 427 GE12714-PA 258..419 267..428 258 38.3 Plus
Dyak\GE20697-PA 370 GE20697-PA 87..287 240..430 249 32.2 Plus
Dyak\GE11243-PA 634 GE11243-PA 364..546 267..437 247 34.2 Plus