Clone MIP22363 Report

Search the DGRC for MIP22363

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:223
Well:63
Vector:pOT2|pOTB7_DraIII
Associated Gene/TranscriptCG43168-RA
Protein status:MIP22363.pep: gold
Sequenced Size:1098

Clone Sequence Records

MIP22363.complete Sequence

1098 bp assembled on 2010-06-02

GenBank Submission: BT124973.1

> MIP22363.complete
CCCCATTATTTCCGAATAATATCAATAAAAATTTGTAGAAATGAGCGGGT
CGAATCCGTCCAATTCCAGGAGGGCCAATTATCGCAATACCTTGGATCCG
GATATGGTTAGCAGAATCGAGCAACTCGAGCAGTTACTGGAGACCGAAAA
ACGGAAGTATCATCAATTGTCCATGGATCGACTTTTAAATTACAAATTGG
ATCGGGATAACCTGCCGGAGGATACTCCGTTGCCAATATACCTGGCCCAT
CGGGAGCCCAGAAGTTTGAGTCCACCAAGCCGGTGGGACGCCTAAAAGAG
TCTCGCATATTAGTCAGCCAGTCAGAAACAGCAGCAGCAGCATCTGCAGC
AGCAGCAACACCAGCAACAACAGCAACACCAGAAACAGCAGCAACATAAT
GCAACATAAAGCGCAGCTCCCATGACTCATTTCGCTTGATGCGCGCGACA
TTAAGAGACAAGGCTGAAGCATAGAAAAACGAGAGAAATACGGAAAAACA
CCACGGATACGAAGCCGAAACACTCACTTGACTTGAAAATCTGCAGAAGA
ATAACTGACAGTGTACACAAGCAGCACTAATTGCTGTAAAATTGCCAACA
GTCCGCAGAGGAGCGGGAGTGGGAGCGAAATCGGGGACTTTGGGCCGACA
TAGAACAACAGGAGAATACAAAAATCACGGCGGCAAAACAACTGGCCGTG
TGTTTAAAAAAAAATCTTAACGGAATGAATGCAACAGAGGAACGAATGTG
CAACGAAACAAGCAACAGCAGCAGCAACATGAAGCCGCAACAGCAACACA
AGCTGCAAACAACTCAATTAACACAAACAACCAGACAGAGAATCGGGCAA
AAGTTGCTGTTGCCTTTGGGCATTGCCCAGCCGACCACGCCCCCCTAGCC
AGCATGACCACCCTTTCCCCCTCGGCCAAAAGCCCTTTTGAGCCTCATTT
TTTTGACACATTTTTCGGGTCCCTCGACAATTGAAAGCGTTTCCGTAATA
TTTGCTAGTAATATCTAGATAAAATATTGTAAGAAATGTAATATTTTTTG
ATATAATAATAAATTTAGATATTCATTTAAAAAAAAAAAAAAAAAAAA

MIP22363.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:39:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG32548-RC 1509 CG32548-RC 539..606 329..396 220 88.2 Plus
CG32548-RB 1684 CG32548-RB 672..739 329..396 220 88.2 Plus
CG17341-RA 1908 CG17341-RA 1651..1718 329..396 220 88.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:50:40
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6268723..6269504 297..1078 3895 99.9 Plus
chr3L 24539361 chr3L 6268256..6268553 1..298 1460 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:50:38
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6276254..6277038 297..1081 3925 100 Plus
3L 28110227 3L 6275787..6276084 1..298 1490 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:55:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6269354..6270138 297..1081 3925 100 Plus
3L 28103327 3L 6268887..6269184 1..298 1490 100 Plus
2L 23513712 2L 14158818..14158885 329..396 220 88.2 Plus
X 23527363 X 4091303..4091374 327..398 210 86.1 Plus
3L 28103327 3L 5565283..5565350 329..396 205 86.7 Plus
3L 28103327 3L 3646201..3646268 329..396 205 86.7 Plus
3L 28103327 3L 11398601..11398669 329..397 195 85.5 Plus
2L 23513712 2L 16559845..16559906 335..396 190 87 Plus
2R 25260384 2R 25151728..25151795 329..396 190 85.2 Plus
2R 25260384 2R 25143984..25144051 329..396 190 85.2 Plus
Blast to na_te.dros performed on 2019-03-16 18:50:39 has no hits.

MIP22363.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:51:40 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6268256..6268553 1..298 99 == Plus
chr3L 6268823..6269464 397..1038 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2010-06-02 15:44:57 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 21:59:53 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:51:38 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 1..255 41..295 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:01 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 1..255 41..295 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-06-02 15:44:56 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 21:59:53 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:38 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 1..1078 1..1078 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:01 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
CG43168-RA 1..1078 1..1078 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6275787..6276084 1..298 100 -> Plus
3L 6276256..6277035 299..1078 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6275787..6276084 1..298 100 -> Plus
3L 6276256..6277035 299..1078 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6275787..6276084 1..298 100 -> Plus
3L 6276256..6277035 299..1078 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:38 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6268887..6269184 1..298 100 -> Plus
arm_3L 6269356..6270135 299..1078 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:37:26 Download gff for MIP22363.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6268887..6269184 1..298 100 -> Plus
3L 6269356..6270135 299..1078 100   Plus

MIP22363.pep Sequence

Translation from 40 to 294

> MIP22363.pep
MSGSNPSNSRRANYRNTLDPDMVSRIEQLEQLLETEKRKYHQLSMDRLLN
YKLDRDNLPEDTPLPIYLAHREPRSLSPPSRWDA*

MIP22363.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19386-PA 125 GF19386-PA 57..114 27..84 166 55.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15338-PA 106 GG15338-PA 27..100 14..83 215 59.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG43168-PA 84 CG43168-PA 1..84 1..84 443 100 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:08:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20773-PA 152 GK20773-PA 94..141 36..83 149 62.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21555-PA 106 GE21555-PA 44..100 27..83 191 63.2 Plus

MIP22363.hyp Sequence

Translation from 40 to 294

> MIP22363.hyp
MSGSNPSNSRRANYRNTLDPDMVSRIEQLEQLLETEKRKYHQLSMDRLLN
YKLDRDNLPEDTPLPIYLAHREPRSLSPPSRWDA*

MIP22363.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG43168-PA 84 CG43168-PA 1..84 1..84 443 100 Plus