MIP22363.complete Sequence
1098 bp assembled on 2010-06-02
GenBank Submission: BT124973.1
> MIP22363.complete
CCCCATTATTTCCGAATAATATCAATAAAAATTTGTAGAAATGAGCGGGT
CGAATCCGTCCAATTCCAGGAGGGCCAATTATCGCAATACCTTGGATCCG
GATATGGTTAGCAGAATCGAGCAACTCGAGCAGTTACTGGAGACCGAAAA
ACGGAAGTATCATCAATTGTCCATGGATCGACTTTTAAATTACAAATTGG
ATCGGGATAACCTGCCGGAGGATACTCCGTTGCCAATATACCTGGCCCAT
CGGGAGCCCAGAAGTTTGAGTCCACCAAGCCGGTGGGACGCCTAAAAGAG
TCTCGCATATTAGTCAGCCAGTCAGAAACAGCAGCAGCAGCATCTGCAGC
AGCAGCAACACCAGCAACAACAGCAACACCAGAAACAGCAGCAACATAAT
GCAACATAAAGCGCAGCTCCCATGACTCATTTCGCTTGATGCGCGCGACA
TTAAGAGACAAGGCTGAAGCATAGAAAAACGAGAGAAATACGGAAAAACA
CCACGGATACGAAGCCGAAACACTCACTTGACTTGAAAATCTGCAGAAGA
ATAACTGACAGTGTACACAAGCAGCACTAATTGCTGTAAAATTGCCAACA
GTCCGCAGAGGAGCGGGAGTGGGAGCGAAATCGGGGACTTTGGGCCGACA
TAGAACAACAGGAGAATACAAAAATCACGGCGGCAAAACAACTGGCCGTG
TGTTTAAAAAAAAATCTTAACGGAATGAATGCAACAGAGGAACGAATGTG
CAACGAAACAAGCAACAGCAGCAGCAACATGAAGCCGCAACAGCAACACA
AGCTGCAAACAACTCAATTAACACAAACAACCAGACAGAGAATCGGGCAA
AAGTTGCTGTTGCCTTTGGGCATTGCCCAGCCGACCACGCCCCCCTAGCC
AGCATGACCACCCTTTCCCCCTCGGCCAAAAGCCCTTTTGAGCCTCATTT
TTTTGACACATTTTTCGGGTCCCTCGACAATTGAAAGCGTTTCCGTAATA
TTTGCTAGTAATATCTAGATAAAATATTGTAAGAAATGTAATATTTTTTG
ATATAATAATAAATTTAGATATTCATTTAAAAAAAAAAAAAAAAAAAA
MIP22363.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:39:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32548-RC | 1509 | CG32548-RC | 539..606 | 329..396 | 220 | 88.2 | Plus |
CG32548-RB | 1684 | CG32548-RB | 672..739 | 329..396 | 220 | 88.2 | Plus |
CG17341-RA | 1908 | CG17341-RA | 1651..1718 | 329..396 | 220 | 88.2 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:50:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 6268723..6269504 | 297..1078 | 3895 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 6268256..6268553 | 1..298 | 1460 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:50:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6276254..6277038 | 297..1081 | 3925 | 100 | Plus |
3L | 28110227 | 3L | 6275787..6276084 | 1..298 | 1490 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:55:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 6269354..6270138 | 297..1081 | 3925 | 100 | Plus |
3L | 28103327 | 3L | 6268887..6269184 | 1..298 | 1490 | 100 | Plus |
2L | 23513712 | 2L | 14158818..14158885 | 329..396 | 220 | 88.2 | Plus |
X | 23527363 | X | 4091303..4091374 | 327..398 | 210 | 86.1 | Plus |
3L | 28103327 | 3L | 5565283..5565350 | 329..396 | 205 | 86.7 | Plus |
3L | 28103327 | 3L | 3646201..3646268 | 329..396 | 205 | 86.7 | Plus |
3L | 28103327 | 3L | 11398601..11398669 | 329..397 | 195 | 85.5 | Plus |
2L | 23513712 | 2L | 16559845..16559906 | 335..396 | 190 | 87 | Plus |
2R | 25260384 | 2R | 25151728..25151795 | 329..396 | 190 | 85.2 | Plus |
2R | 25260384 | 2R | 25143984..25144051 | 329..396 | 190 | 85.2 | Plus |
Blast to na_te.dros performed on 2019-03-16 18:50:39 has no hits.
MIP22363.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:51:40 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 6268256..6268553 | 1..298 | 99 | == | Plus |
chr3L | 6268823..6269464 | 397..1038 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed on 2010-06-02 15:44:57 has no hits.
Sim4 to dmel-all-CDS-r5.32.fasta performed on 2011-03-16 21:59:53 has no hits.
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:51:38 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43168-RA | 1..255 | 41..295 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:52:01 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43168-RA | 1..255 | 41..295 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed on 2010-06-02 15:44:56 has no hits.
Sim4 to dmel-all-transcript-r5.32.fasta performed on 2011-03-16 21:59:53 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:51:38 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43168-RA | 1..1078 | 1..1078 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:52:01 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43168-RA | 1..1078 | 1..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6275787..6276084 | 1..298 | 100 | -> | Plus |
3L | 6276256..6277035 | 299..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6275787..6276084 | 1..298 | 100 | -> | Plus |
3L | 6276256..6277035 | 299..1078 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:51:40 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6275787..6276084 | 1..298 | 100 | -> | Plus |
3L | 6276256..6277035 | 299..1078 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:51:38 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6268887..6269184 | 1..298 | 100 | -> | Plus |
arm_3L | 6269356..6270135 | 299..1078 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:37:26 Download gff for
MIP22363.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6268887..6269184 | 1..298 | 100 | -> | Plus |
3L | 6269356..6270135 | 299..1078 | 100 | | Plus |
MIP22363.pep Sequence
Translation from 40 to 294
> MIP22363.pep
MSGSNPSNSRRANYRNTLDPDMVSRIEQLEQLLETEKRKYHQLSMDRLLN
YKLDRDNLPEDTPLPIYLAHREPRSLSPPSRWDA*
MIP22363.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19386-PA | 125 | GF19386-PA | 57..114 | 27..84 | 166 | 55.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG15338-PA | 106 | GG15338-PA | 27..100 | 14..83 | 215 | 59.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:13:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43168-PA | 84 | CG43168-PA | 1..84 | 1..84 | 443 | 100 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:08:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK20773-PA | 152 | GK20773-PA | 94..141 | 36..83 | 149 | 62.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:08:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21555-PA | 106 | GE21555-PA | 44..100 | 27..83 | 191 | 63.2 | Plus |
MIP22363.hyp Sequence
Translation from 40 to 294
> MIP22363.hyp
MSGSNPSNSRRANYRNTLDPDMVSRIEQLEQLLETEKRKYHQLSMDRLLN
YKLDRDNLPEDTPLPIYLAHREPRSLSPPSRWDA*
MIP22363.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:45:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43168-PA | 84 | CG43168-PA | 1..84 | 1..84 | 443 | 100 | Plus |