MIP22444.complete Sequence
530 bp assembled on 2010-06-01
GenBank Submission: BT124928.1
> MIP22444.complete
TTTTAAGCCTATTAAGCAATGAACAATCTGTGGCGCGAAATCGGCTTTAT
TACCAAGCGAAGGCCGAAGAAACATGTGAAAATCATTCGGATCAAGAAAC
GCGTTGCCAAATCGAAGAAAGTCTTCAAGCGAAGGCAATATGAACTGATA
CAACTTCATTTGAGAAATCGTATAAAGTATTTAATTATCGAAAATCTGGA
GCAAGCCTTGGCAAAAATCCAAACTAAGAAAGGGATTCAGAAGAGCTTAA
AGTAACATAAACCTAAGTTATGAAAATTAAAATTATTATTATTGAGAAAT
TACCAGTATTGCTAGATAGATAATCTTAAAATTACTGCCCATTTGATTTC
CCAAACTGTTTCACAGTAAATTAGACCATTTTCAAAGAAAAAGCGAACAT
AAACAATAGACGGAAGTGAAATCAATTTCAATTGTTTGCTACCCCATTGA
GATGATTAAAATTTGAAATAAAATCTCGTTGGTCGGCTACCACACACACA
ATCATTTTCAAACTAAAAAAAAAAAAAAAA
MIP22444.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:38:44 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:45:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 6913954..6914467 | 1..514 | 2540 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:45:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11088420..11088933 | 1..514 | 2570 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 10829251..10829764 | 1..514 | 2570 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 17:45:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord | 7404 | accord ACCORD 7404bp | 1338..1411 | 361..287 | 110 | 65.8 | Minus |
MIP22444.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:46:23 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 6913954..6914467 | 1..514 | 95 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:37:37 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43449-RA | 1..237 | 19..255 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:17:22 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43449-RA | 1..237 | 19..255 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:37:37 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43449-RA | 1..514 | 1..514 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:17:22 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43449-RA | 1..514 | 1..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:46:23 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11088420..11088933 | 1..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:46:23 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11088420..11088933 | 1..514 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:46:23 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11088420..11088933 | 1..514 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:37:37 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6914142..6914655 | 1..514 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:36:19 Download gff for
MIP22444.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10829251..10829764 | 1..514 | 100 | | Plus |
MIP22444.pep Sequence
Translation from 18 to 254
> MIP22444.pep
MNNLWREIGFITKRRPKKHVKIIRIKKRVAKSKKVFKRRQYELIQLHLRN
RIKYLIIENLEQALAKIQTKKGIQKSLK*
MIP22444.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43449-PB | 78 | CG43449-PB | 1..78 | 1..78 | 389 | 100 | Plus |
CG43449-PA | 78 | CG43449-PA | 1..78 | 1..78 | 389 | 100 | Plus |
MIP22444.hyp Sequence
Translation from 18 to 254
> MIP22444.hyp
MNNLWREIGFITKRRPKKHVKIIRIKKRVAKSKKVFKRRQYELIQLHLRN
RIKYLIIENLEQALAKIQTKKGIQKSLK*
MIP22444.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:35:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43449-PB | 78 | CG43449-PB | 1..78 | 1..78 | 389 | 100 | Plus |
CG43449-PA | 78 | CG43449-PA | 1..78 | 1..78 | 389 | 100 | Plus |