Clone Sequence Records
MIP22514.complete Sequence
973 bp assembled on 2010-06-02
GenBank Submission: BT124961.1
> MIP22514.complete
AGGACTTTTCCAGTGAGACGGGTGTCAGTGGGAGTTGGGCCGGAAAACCC
AACAAAAGGAGGAGCCGCAAGCAACCGCAAGGGGGAAAAGCTGGAAAACC
CAGGGAGCCCAGCAGGACTTGTTTTGTATTTGTCCCGAAAAAAGAGGAGA
GCAAAAATTTGTTTTAATGCCACGCTCTTTTTATGCTTTTCTTTATAACT
TCTTTTCAGCTTTTTTGTCATGTTACAATTCTGCAGCGACAGCAGTAAAA
AATAATATCCCCACACCCGCCCCCAACCGGCAACCGCAACTTGTGCAACA
TCATAAACCCATTTGCGTTTTTAATTAGTAACATCGCAGCTTGGCGGACT
GAAGCGGTCGGCCGAGGGCGAAAAGTAAATGACCATGCACAAAATGTTGC
ACAGATAACAAGTCCTGGCCTCACAAGCCCCACAAAAAAAAAAAAAACTA
GAGCAAATAAGTGCGAACACAACTAGCCATGGAACAGGAACGGGGAACTG
CTAACTGGAAACAGGGAGCAGCCGGTGGCCAGTTCATCCTCATCACAGCC
ATAAAAGAGTCCGCCGCCAACAAAGTTGAAAAAGCGCAGCTCAAGTGGAG
CAGCCTCCAGTCGGCGGAAATGGTTTCGGTTTCGGGTTCGTGGCTCACTT
TTTATATTTTAAAACCTTTTTTTTTTTAGTTCGTATATGGGGCAACGACC
CTGGGTCACTGCGACTGACCAGTGAAGAGGATTCCGTGAGGGAGGTGCCG
ACAGGTGTAGTGTCCTTCAAGTGGCAGGGATAATCCCACCGAACACCAAC
GCTAATTAAAGATGGGGGAATAAGTGTGATATCACTTTGGTGAAAGACCT
AATGAATAGAGATGCGTATGTGATTGACATATAAAATGAATATTCCATTA
ATATGTAGGTAATAAAAAAGCCCATCATATTAGTTGATGTTTAGTTCGCC
CGACGTAAAAAAAAAAAAAAAAA
MIP22514.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:39:09 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:41:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3L | 24539361 | chr3L | 13273173..13273678 | 460..956 | 2345 | 98 | Plus |
| chr3L | 24539361 | chr3L | 13272654..13273113 | 1..461 | 2210 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:41:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13282914..13283412 | 460..958 | 2495 | 100 | Plus |
| 3L | 28110227 | 3L | 13282393..13282854 | 1..461 | 2260 | 99.8 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:55:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28103327 | 3L | 13276014..13276512 | 460..958 | 2495 | 100 | Plus |
| 3L | 28103327 | 3L | 13275493..13275954 | 1..461 | 2270 | 99.7 | Plus |
Blast to na_te.dros performed 2019-03-16 12:41:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| gtwin | 7411 | gtwin GTWIN 7411bp | 651..716 | 176..237 | 113 | 68.2 | Plus |
MIP22514.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:42:21 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3L | 13272654..13273113 | 1..461 | 99 | -> | Plus |
| chr3L | 13273175..13273678 | 462..956 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:12:10 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43146-RA | 1..201 | 479..679 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:12:10 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43146-RB | 1..957 | 1..956 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:21 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13282393..13282854 | 1..461 | 99 | -> | Plus |
| 3L | 13282916..13283410 | 462..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:21 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13282393..13282854 | 1..461 | 99 | -> | Plus |
| 3L | 13282916..13283410 | 462..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:42:21 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13282393..13282854 | 1..461 | 99 | -> | Plus |
| 3L | 13282916..13283410 | 462..956 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:12:10 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13275493..13275954 | 1..461 | 99 | -> | Plus |
| arm_3L | 13276016..13276510 | 462..956 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:37:09 Download gff for
MIP22514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13275493..13275954 | 1..461 | 99 | -> | Plus |
| 3L | 13276016..13276510 | 462..956 | 100 | | Plus |
MIP22514.pep Sequence
Translation from 478 to 678
> MIP22514.pep
MEQERGTANWKQGAAGGQFILITAIKESAANKVEKAQLKWSSLQSAEMVS
VSGSWLTFYILKPFFF*
MIP22514.pep Blast Records
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM25407-PA | 86 | GM25407-PA | 1..52 | 1..52 | 236 | 94.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:23:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD14438-PA | 86 | GD14438-PA | 1..52 | 1..52 | 232 | 94.2 | Plus |
MIP22514.hyp Sequence
Translation from 478 to 678
> MIP22514.hyp
MEQERGTANWKQGAAGGQFILITAIKESAANKVEKAQLKWSSLQSAEMVS
VSGSWLTFYILKPFFF*
Sequence MIP22514.hyp has no blast hits.
