Clone Sequence Records
MIP22722.complete Sequence
768 bp assembled on 2011-03-15
GenBank Submission: BT126223.1
> MIP22722.complete
CAAATTCAACAACATATTTGATAGATTTCAGAAAACCTACGATTCATAGG
TTTCAAGGGGCCTTGCAGATCCATGTGGCTTCTCTTGCTCCTGCTGGGTC
TGCCGATGGAAACAAACGAAGGAGAGGAGTGCAGAAATGGACTAACTCTC
GGACGCCAGCAGTGCTACCTCCACGAGGAGATCTTTCTAGCCCACCACCC
TTTGCAAAGTGTCACAGCCAAGAGGCTCAAGCTTCCCTGGTGGTGCGCCC
TCCTAGAAAGCCTCTTCCTGCTCCTGCTGGTGAAGCTGCTCCAGTTGTAG
ATGAGCCAACATCTCTCTCTCTTTCTCTCTCTCTCCGTAATTGCCGCTGA
TGTAAGCGGACAGGTGGAGGCGACAAATGTCACACATGCTGCTCGTAAAT
CACATCGGAAACGGTTTTGCTCTTGCTGCACATGATAATTTGGCCAGGGT
GGCTTGCTGGAGGTCTGGCCTATGTGCTTCTAATTAAATTGTTCAAAATG
TTTTAAAGCGCGCTTTTGGGTCTGGCGCTGGAAAATCGCTGACAAATGCT
TCCATCAAAACACAGAAAAAGTTTTCATTTTGTTTTGTCAATGTCCAGGC
CACATAGCACTCAACGGTGGACGGGCACAGTGGGCTGCGATCTATGGAAA
TGGGAGCATATGGAAATATGGCATCACATGGTTTTGTGACAAATTATAAA
TATATATTTTACAAGAGGTGACTGTAGAGTAAATAAATACTAAATCAAAT
GAAAAAAAAAAAAAAAAA
MIP22722.complete Blast Records
Blast to d_melanogaster_OreR.fa performed 2019-03-16 22:29:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 20695296..20696046 | 1..751 | 3740 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 22:29:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24809357..24810108 | 1..752 | 3760 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:08:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 24810556..24811307 | 1..752 | 3760 | 100 | Plus |
Blast to na_te.dros performed 2019-03-16 22:29:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2772..2800 | 303..275 | 109 | 86.2 | Minus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6398..6449 | 297..250 | 107 | 71.2 | Minus |
TART-C | 11124 | TART-C TARTC 11124bp | 7854..7905 | 297..250 | 107 | 71.2 | Minus |
MIP22722.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 22:30:28 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 20695296..20696046 | 1..751 | 94 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-15 14:35:42 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RA | 1..228 | 73..300 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 20:56:11 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RA | 1..228 | 73..300 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:28:29 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RB | 1..195 | 106..300 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-15 14:35:41 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RA | 10..342 | 1..333 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 20:56:11 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RA | 33..783 | 1..751 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:28:29 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42851-RB | 33..783 | 1..751 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:30:28 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24809357..24810107 | 1..751 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:30:28 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24809357..24810107 | 1..751 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 22:30:28 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24809357..24810107 | 1..751 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 20:56:11 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20696880..20697630 | 1..751 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:01:55 Download gff for
MIP22722.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24810574..24811324 | 1..751 | 100 | | Plus |
MIP22722.hyp Sequence
Translation from 2 to 349
> MIP22722.hyp
NSTTYLIDFRKPTIHRFQGALQIHVASLAPAGSADGNKRRRGVQKWTNSR
TPAVLPPRGDLSSPPPFAKCHSQEAQASLVVRPPRKPLPAPAGEAAPVVD
EPTSLSLSLSLRNCR*
Sequence MIP22722.hyp has no blast hits.
MIP22722.pep Sequence
Translation from 72 to 299
> MIP22722.pep
MWLLLLLLGLPMETNEGEECRNGLTLGRQQCYLHEEIFLAHHPLQSVTAK
RLKLPWWCALLESLFLLLLVKLLQL*
MIP22722.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23009-PA | 75 | GG23009-PA | 1..59 | 1..59 | 234 | 86.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42851-PB | 64 | CG42851-PB | 1..64 | 12..75 | 341 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:10:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM11903-PA | 75 | GM11903-PA | 1..59 | 1..59 | 286 | 89.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:10:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD11900-PA | 75 | GD11900-PA | 1..59 | 1..59 | 288 | 91.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:10:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14446-PA | 64 | GE14446-PA | 1..49 | 12..60 | 229 | 85.7 | Plus |