MIP22882.complete Sequence
417 bp assembled on 2010-06-01
GenBank Submission: BT124958.1
> MIP22882.complete
CTAAAGATGTCTCCTAAGTTCGCACTTGCAGTTCTGCTCCTCAGCTGCGT
TCTCCTAGGACTGGCCAATGCCCAGTATAACAGGCGCTATCAGACTGGGC
CTAACCGACAAAAAATTGGGACTCGAATGAATGCGGACGGCCCTTTGCCG
CCAAATTTCCCCCCTCCGGCTGATAATGCTGGTGGCAGTGATGTCCCGGC
CAACGTGGATTGCATGCCCAATCTATTGGCTAGTAACACCCTTGATACCA
GGAAACCTAGGCCCAAGCATTAAAAACCCAAAAAGTTCAACTCCTAAACG
GACCCGAATATATAGTAAGCTGATGGAGTCCGCAGTAATTGATTTTAAAT
GAAAAATGGATTTTTTTTTTTAAATTAAAAAATGCATTTACTTTCGTAAA
AAAAAAAAAAAAAAAAA
MIP22882.complete Blast Records
Blast to MB8.fasta performed on 2010-07-15 21:39:06 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:55:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 15863746..15864028 | 397..115 | 1415 | 100 | Minus |
chr2L | 23010047 | chr2L | 15864094..15864207 | 114..1 | 555 | 99.1 | Minus |
chr2L | 23010047 | chr2L | 15881855..15881968 | 114..1 | 465 | 93.9 | Minus |
chr2L | 23010047 | chr2L | 15881652..15881763 | 273..162 | 455 | 93.8 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:55:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15864960..15865250 | 405..115 | 1440 | 99.7 | Minus |
2L | 23513712 | 2L | 15865316..15865429 | 114..1 | 570 | 100 | Minus |
2L | 23513712 | 2L | 15883066..15883179 | 114..1 | 465 | 93.9 | Minus |
2L | 23513712 | 2L | 15882863..15882974 | 273..162 | 455 | 93.8 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:55:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15864960..15865250 | 405..115 | 1440 | 99.6 | Minus |
2L | 23513712 | 2L | 15865316..15865429 | 114..1 | 570 | 100 | Minus |
2L | 23513712 | 2L | 15883066..15883179 | 114..1 | 465 | 93.8 | Minus |
2L | 23513712 | 2L | 15882863..15882974 | 273..162 | 455 | 93.7 | Minus |
2L | 23513712 | 2L | 15882971..15883000 | 144..115 | 150 | 100 | Minus |
Blast to na_te.dros performed 2019-03-15 18:55:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
accord | 7404 | accord ACCORD 7404bp | 6444..6521 | 379..307 | 107 | 65.4 | Minus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 27..70 | 245..285 | 105 | 75 | Plus |
Dmau\mariner | 1286 | Dmau\mariner DMMAR 1286bp Derived from M14653 (Rel. 63, Last updated, Version 2). | 638..661 | 349..372 | 102 | 91.7 | Plus |
MIP22882.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:56:22 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 15863785..15864028 | 115..358 | 100 | <- | Minus |
chr2L | 15864094..15864207 | 1..114 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:59:37 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RA | 1..267 | 7..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:35:43 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RA | 1..267 | 7..273 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:34 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RB | 1..267 | 7..273 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:59:37 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RA | 1..267 | 7..273 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:35:43 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RA | 1..397 | 1..397 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:34 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42792-RB | 33..429 | 1..397 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:56:22 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15864968..15865250 | 115..397 | 100 | <- | Minus |
2L | 15865316..15865429 | 1..114 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:56:22 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15864968..15865250 | 115..397 | 100 | <- | Minus |
2L | 15865316..15865429 | 1..114 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:56:22 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15864968..15865250 | 115..397 | 100 | <- | Minus |
2L | 15865316..15865429 | 1..114 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:35:43 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15865316..15865429 | 1..114 | 100 | | Minus |
arm_2L | 15864968..15865250 | 115..397 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:37:04 Download gff for
MIP22882.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15864968..15865250 | 115..397 | 100 | <- | Minus |
2L | 15865316..15865429 | 1..114 | 100 | | Minus |
MIP22882.pep Sequence
Translation from 0 to 272
> MIP22882.pep
LKMSPKFALAVLLLSCVLLGLANAQYNRRYQTGPNRQKIGTRMNADGPLP
PNFPPPADNAGGSDVPANVDCMPNLLASNTLDTRKPRPKH*
MIP22882.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:23:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24190-PA | 85 | GG24190-PA | 1..84 | 3..89 | 230 | 60 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42792-PA | 88 | CG42792-PA | 1..88 | 3..90 | 472 | 100 | Plus |
CG42792-PB | 88 | CG42792-PB | 1..88 | 3..90 | 472 | 100 | Plus |
CG44475-PA | 81 | CG44475-PA | 1..81 | 3..90 | 382 | 85.2 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:23:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM17928-PA | 88 | GM17928-PA | 1..88 | 3..90 | 357 | 90.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:23:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD21934-PA | 88 | GD21934-PA | 1..88 | 3..90 | 307 | 90.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:23:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE19381-PA | 71 | GE19381-PA | 1..70 | 21..89 | 156 | 65.7 | Plus |
Dyak\GE19384-PA | 65 | GE19384-PA | 1..64 | 21..89 | 149 | 54.3 | Plus |
Dyak\GE19383-PA | 62 | GE19383-PA | 1..61 | 21..89 | 132 | 50 | Plus |
MIP22882.hyp Sequence
Translation from 0 to 272
> MIP22882.hyp
LKMSPKFALAVLLLSCVLLGLANAQYNRRYQTGPNRQKIGTRMNADGPLP
PNFPPPADNAGGSDVPANVDCMPNLLASNTLDTRKPRPKH*
MIP22882.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:36:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42792-PA | 88 | CG42792-PA | 1..88 | 3..90 | 472 | 100 | Plus |
CG42792-PB | 88 | CG42792-PB | 1..88 | 3..90 | 472 | 100 | Plus |
CG44475-PA | 81 | CG44475-PA | 1..81 | 3..90 | 382 | 85.2 | Plus |