Clone MIP22901 Report

Search the DGRC for MIP22901

Clone and Library Details

Library:MIP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by:
Date Registered:2008-10-08
Comments:
Original Plate Number:229
Well:1
Vector:pOT2
Associated Gene/TranscriptCG43797-RA
Protein status:MIP22901.pep: gold
Sequenced Size:809

Clone Sequence Records

MIP22901.complete Sequence

809 bp assembled on 2010-06-03

GenBank Submission: BT124976.1

> MIP22901.complete
TTCGCAGTTCAAGCGCTTAAGAAAATGTTCAAGTTGGGAACATATTATTT
CTGCATTATCGTCACATTTCACGCGTATGGAATAGTTAGTCCTCAGGATG
AAAAAGATTCAGAGTGCGTCCTGACGGATGCGCCCAATCAATGTGGGGCA
TTCTGTATGTCCGCTCAAAGGCCACTCTTCGAACACAATCGCATTATTCA
GAATCAAATATATGAAATTAGTTCACTACAAGCTGAAAGTCACGAGAGAC
TTAAAAGAATCGAAAACGAATTAATAAATTTACAAATCGAACAAAAGGAA
AGTAAGCAAGCAATTAATGAAAATGACGATACAAAAGTTGAAGGAATCGA
AACTACGACAAGTGTCAATCTAATTAAAAAAAAGAAATACGTCATTGTTG
ATAAGGCACTAAATTGGTATAATGCTGTAAAGTTCTGCCAAGAAATTGGA
GGCAAACTAGCTGAATTCAGTGATGAACATGAGTACGACACTGTCATATC
AACAGTTGAACCTGATACTTGTTACTGGATTGGCATTCGCAGTTATAATA
ACGAACATCAATCTTTGCGTACTGACAATCGCCCATTATATCTTAAAATG
GCTGATATGCCAAACAACAATATTTTTAATGGTGAAAATTGTGTTGGTAT
TCAAAACGGTTTTATGCATGACCTTTGGTGCAATTTAAGCTATTACTCTA
TTTGCACAACTAGTTGGTTTTAAAATCGTTGGCAACAAATGTAGAATGCG
ATTGCTTGTTCAATAAAATATTATTAATTTCCAATGCGCAAAAAAAAAAA
AAAAAAAAA

MIP22901.complete Blast Records

Blast to MB8.fasta performed on 2010-07-15 21:24:02 has no hits.
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:15:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3999438..4000226 1..789 3945 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:15:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4000018..4000807 1..790 3950 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:41:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4000018..4000807 1..790 3950 100 Plus
Blast to na_te.dros performed on 2019-03-16 20:15:22 has no hits.

MIP22901.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:16:28 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3999438..4000226 1..789 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:04:01 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 1..699 25..723 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:55:45 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 1..699 25..723 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:04:01 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 1..789 1..789 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:55:45 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
CG43797-RA 1..789 1..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:28 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4000018..4000806 1..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:28 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4000018..4000806 1..789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:16:28 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4000018..4000806 1..789 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:04:01 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4000018..4000806 1..789 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:09:38 Download gff for MIP22901.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4000018..4000806 1..789 100   Plus

MIP22901.pep Sequence

Translation from 0 to 722

> MIP22901.pep
FAVQALKKMFKLGTYYFCIIVTFHAYGIVSPQDEKDSECVLTDAPNQCGA
FCMSAQRPLFEHNRIIQNQIYEISSLQAESHERLKRIENELINLQIEQKE
SKQAINENDDTKVEGIETTTSVNLIKKKKYVIVDKALNWYNAVKFCQEIG
GKLAEFSDEHEYDTVISTVEPDTCYWIGIRSYNNEHQSLRTDNRPLYLKM
ADMPNNNIFNGENCVGIQNGFMHDLWCNLSYYSICTTSWF*

MIP22901.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:09:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15345-PA 204 GF15345-PA 3..199 12..237 182 24 Plus
Dana\GF19731-PA 235 GF19731-PA 1..231 43..235 170 25.9 Plus
Dana\GF14435-PA 432 GF14435-PA 20..210 37..214 161 31.1 Plus
Dana\GF15878-PA 212 GF15878-PA 1..210 9..237 143 22.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24559-PA 1288 GG24559-PA 23..256 34..237 221 30.4 Plus
Dere\GG21745-PA 255 GG21745-PA 26..249 37..237 198 28.2 Plus
Dere\GG10503-PA 276 GG10503-PA 1..275 9..240 183 23.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11271-PA 376 GH11271-PA 147..372 46..237 164 28.7 Plus
Dgri\GH23701-PA 385 GH23701-PA 156..381 46..237 162 29.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG43797-PA 232 CG43797-PA 1..232 9..240 1254 100 Plus
lectin-22C-PB 263 CG42295-PB 1..256 9..237 243 26.9 Plus
CG15358-PE 252 CG15358-PE 8..244 19..235 208 25.6 Plus
CG15358-PD 252 CG15358-PD 8..244 19..235 208 25.6 Plus
lectin-28C-PC 265 CG7106-PC 5..259 11..235 182 26.4 Plus
lectin-28C-PB 265 CG7106-PB 5..259 11..235 182 26.4 Plus
CG7763-PD 232 CG7763-PD 22..229 39..238 147 25.6 Plus
CG7763-PC 232 CG7763-PC 22..229 39..238 147 25.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:09:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10741-PA 236 GL10741-PA 12..230 19..235 179 24.8 Plus
Dper\GL26845-PA 183 GL26845-PA 31..178 82..238 150 28 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24466-PA 236 GA24466-PA 1..233 9..238 187 23 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16582-PA 268 GM16582-PA 42..262 37..237 206 26.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11996-PA 252 GD11996-PA 8..246 19..237 213 26.9 Plus
Dsim\GD22877-PA 230 GD22877-PA 3..228 39..237 201 28.8 Plus
Dsim\GD23494-PA 275 GD23494-PA 1..255 9..222 177 25.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:09:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16447-PA 189 GJ16447-PA 19..186 83..237 152 28.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24541-PA 431 GK24541-PA 30..210 47..218 159 26.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:09:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17834-PA 214 GE17834-PA 1..209 9..235 223 29.3 Plus
Dyak\GE15379-PA 226 GE15379-PA 1..221 9..235 216 29.1 Plus
Dyak\GE15323-PA 368 GE15323-PA 111..362 3..237 214 27.1 Plus
Dyak\GE17736-PA 275 GE17736-PA 1..270 9..235 204 26.5 Plus
Dyak\GE14642-PA 274 GE14642-PA 1..267 9..235 195 27.2 Plus

MIP22901.hyp Sequence

Translation from 0 to 722

> MIP22901.hyp
FAVQALKKMFKLGTYYFCIIVTFHAYGIVSPQDEKDSECVLTDAPNQCGA
FCMSAQRPLFEHNRIIQNQIYEISSLQAESHERLKRIENELINLQIEQKE
SKQAINENDDTKVEGIETTTSVNLIKKKKYVIVDKALNWYNAVKFCQEIG
GKLAEFSDEHEYDTVISTVEPDTCYWIGIRSYNNEHQSLRTDNRPLYLKM
ADMPNNNIFNGENCVGIQNGFMHDLWCNLSYYSICTTSWF*

MIP22901.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG43797-PA 232 CG43797-PA 1..232 9..240 1254 100 Plus
lectin-22C-PB 263 CG42295-PB 1..256 9..237 243 26.9 Plus
CG15358-PC 229 CG15358-PC 3..221 37..235 199 26.8 Plus
CG15358-PB 229 CG15358-PB 3..221 37..235 199 26.8 Plus
lectin-28C-PC 265 CG7106-PC 5..259 11..235 182 26.4 Plus